Wall clock time and date at job start Sat Mar 6 2021 15:33:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45202 * 1 3 3 C 1.34227 * 117.00403 * 2 1 4 4 O 1.20823 * 119.99650 * 0.02562 * 3 2 1 5 5 C 1.50701 * 120.00009 * 180.02562 * 3 2 1 6 6 H 1.09006 * 112.91053 * 311.25179 * 5 3 2 7 7 C 1.53779 * 113.61419 * 82.50386 * 5 3 2 8 8 C 1.53784 * 87.08045 * 139.98099 * 7 5 3 9 9 H 1.08994 * 113.61477 * 89.11454 * 8 7 5 10 10 N 1.46496 * 113.61320 * 220.02163 * 8 7 5 11 11 C 1.34774 * 120.00099 * 252.49766 * 10 8 7 12 12 O 1.21699 * 119.99730 * 359.97438 * 11 10 8 13 13 C 1.46676 * 120.00622 * 180.02562 * 11 10 8 14 14 C 1.37873 * 126.23844 * 179.71909 * 13 11 10 15 15 C 1.39832 * 107.08513 * 179.84682 * 14 13 11 16 16 C 1.50697 * 126.06540 * 180.17822 * 15 14 13 17 17 O 1.42897 * 109.47588 * 65.30111 * 16 15 14 18 18 Si 1.86302 * 109.47171 * 185.30062 * 16 15 14 19 19 C 1.35454 * 107.86667 * 0.41035 * 15 14 13 20 20 N 1.35533 * 108.87185 * 359.74340 * 19 15 14 21 21 C 1.53779 * 113.61123 * 180.02562 * 5 3 2 22 22 H 1.09000 * 109.46630 * 299.99931 * 1 2 3 23 23 H 1.09001 * 109.46720 * 59.99648 * 1 2 3 24 24 H 1.09001 * 109.47478 * 180.02562 * 1 2 3 25 25 H 1.09002 * 113.61557 * 25.43210 * 7 5 3 26 26 H 1.09004 * 113.61501 * 254.52631 * 7 5 3 27 27 H 0.97002 * 120.00490 * 72.49429 * 10 8 7 28 28 H 1.08000 * 126.45053 * 359.94863 * 14 13 11 29 29 H 1.09000 * 109.47237 * 305.29902 * 16 15 14 30 30 H 0.96699 * 114.00380 * 59.99877 * 17 16 15 31 31 H 1.48502 * 110.00078 * 180.02562 * 18 16 15 32 32 H 1.48507 * 109.99817 * 301.31533 * 18 16 15 33 33 H 1.07997 * 125.56494 * 179.71124 * 19 15 14 34 34 H 0.96994 * 125.67990 * 180.02562 * 20 19 15 35 35 H 1.08997 * 113.61646 * 105.47284 * 21 5 3 36 36 H 1.08998 * 113.69354 * 334.57592 * 21 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0615 1.1959 0.0000 4 8 1.4034 2.2092 0.0005 5 6 3.5664 1.2747 -0.0006 6 1 4.0251 0.6356 0.7540 7 6 4.1906 1.1236 -1.3978 8 6 5.1808 2.2268 -0.9886 9 1 6.0807 1.8480 -0.5041 10 7 5.4694 3.1832 -2.0600 11 6 6.6671 3.1620 -2.6777 12 8 7.5090 2.3486 -2.3450 13 6 6.9564 4.1200 -3.7501 14 6 8.1336 4.2162 -4.4613 15 6 7.9735 5.2565 -5.3819 16 6 9.0016 5.7244 -6.3795 17 8 9.2499 4.6868 -7.3300 18 14 8.3664 7.2368 -7.2628 19 6 6.7323 5.7723 -5.2144 20 7 6.1040 5.0905 -4.2258 21 6 4.1079 2.7140 0.0001 22 1 -0.3632 0.5138 0.8900 23 1 -0.3633 0.5139 -0.8900 24 1 -0.3634 -1.0276 0.0005 25 1 3.5227 1.4152 -2.2084 26 1 4.6609 0.1543 -1.5635 27 1 4.7986 3.8318 -2.3250 28 1 9.0129 3.6025 -4.3328 29 1 9.9275 5.9697 -5.8591 30 1 8.4681 4.4172 -7.8312 31 1 9.3709 7.7078 -8.2499 32 1 7.0877 6.9239 -7.9501 33 1 6.3121 6.5933 -5.7765 34 1 5.2034 5.2583 -3.9069 35 1 4.5114 3.0283 0.9626 36 1 3.4182 3.4416 -0.4276 There are 51 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 51 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10970304_10543058.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:33:44 Heat of formation + Delta-G solvation = -78.585496 kcal Electronic energy + Delta-G solvation = -21316.128872 eV Core-core repulsion = 17768.813662 eV Total energy + Delta-G solvation = -3547.315211 eV No. of doubly occupied orbitals = 51 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 281.114 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -42.50987 -41.94466 -40.57557 -39.06021 -37.79182 -37.45924 -34.78718 -32.52417 -30.80249 -29.37815 -27.26323 -26.86669 -26.24967 -24.25455 -22.32053 -21.40674 -20.94899 -20.65771 -19.77396 -18.99925 -18.04513 -17.59226 -17.45862 -17.14000 -16.55629 -16.37037 -16.15983 -15.89192 -15.59575 -14.94313 -14.71448 -14.49185 -14.40067 -14.28380 -13.85888 -13.66235 -13.55241 -13.45006 -13.03813 -12.56955 -12.45104 -12.37874 -11.87833 -11.85195 -11.80392 -11.47239 -11.30432 -10.47433 -10.29286 -9.96650 -9.30118 -4.82949 0.35051 1.03122 1.39978 1.55284 1.61284 1.68462 1.98553 2.10260 2.16709 2.23366 3.20128 3.28773 3.56810 3.61493 3.71140 3.78626 3.98012 4.01518 4.16624 4.23648 4.26533 4.35297 4.47948 4.53635 4.58809 4.66662 4.74139 4.79421 4.89136 4.89816 4.99845 5.04633 5.30126 5.38180 5.58985 5.73873 6.32269 6.49984 6.61846 6.63623 7.02328 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.364 6.364 3 C 0.472 3.528 4 O -0.536 6.536 5 C -0.106 4.106 6 H 0.151 0.849 7 C -0.130 4.130 8 C 0.125 3.875 9 H 0.118 0.882 10 N -0.706 5.706 11 C 0.591 3.409 12 O -0.571 6.571 13 C -0.070 4.070 14 C -0.103 4.103 15 C -0.224 4.224 16 C -0.060 4.060 17 O -0.557 6.557 18 Si 0.788 3.212 19 C 0.059 3.941 20 N -0.516 5.516 21 C -0.117 4.117 22 H 0.062 0.938 23 H 0.062 0.938 24 H 0.127 0.873 25 H 0.090 0.910 26 H 0.092 0.908 27 H 0.411 0.589 28 H 0.126 0.874 29 H 0.109 0.891 30 H 0.384 0.616 31 H -0.314 1.314 32 H -0.268 1.268 33 H 0.212 0.788 34 H 0.436 0.564 35 H 0.100 0.900 36 H 0.100 0.900 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.040 3.507 1.103 7.071 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.280 6.280 3 C 0.316 3.684 4 O -0.425 6.425 5 C -0.125 4.125 6 H 0.169 0.831 7 C -0.169 4.169 8 C 0.020 3.980 9 H 0.136 0.864 10 N -0.356 5.356 11 C 0.380 3.620 12 O -0.450 6.450 13 C -0.183 4.183 14 C -0.130 4.130 15 C -0.230 4.230 16 C -0.169 4.169 17 O -0.366 6.366 18 Si 0.692 3.308 19 C -0.079 4.079 20 N -0.113 5.113 21 C -0.155 4.155 22 H 0.081 0.919 23 H 0.080 0.920 24 H 0.145 0.855 25 H 0.109 0.891 26 H 0.110 0.890 27 H 0.248 0.752 28 H 0.144 0.856 29 H 0.127 0.873 30 H 0.233 0.767 31 H -0.243 1.243 32 H -0.194 1.194 33 H 0.229 0.771 34 H 0.278 0.722 35 H 0.119 0.881 36 H 0.119 0.881 Dipole moment (debyes) X Y Z Total from point charges -5.491 3.583 0.951 6.625 hybrid contribution -0.930 -0.973 -0.500 1.436 sum -6.421 2.611 0.451 6.946 Atomic orbital electron populations 1.23528 0.75005 1.05576 1.02499 1.86526 1.24794 1.33266 1.83444 1.23954 0.92444 0.81009 0.70961 1.90661 1.67846 1.37286 1.46748 1.22428 0.86011 1.01752 1.02307 0.83090 1.23431 0.97625 1.01231 0.94610 1.22469 0.97852 0.89663 0.88010 0.86418 1.45681 1.15421 1.37195 1.37327 1.17251 0.82007 0.82201 0.80511 1.90852 1.48020 1.40238 1.65902 1.20142 0.94157 0.99474 1.04560 1.21246 0.96611 0.99074 0.96037 1.19870 0.97292 1.02214 1.03616 1.24742 1.01336 0.99133 0.91655 1.86571 1.39496 1.56104 1.54379 0.94253 0.76472 0.78569 0.81546 1.22375 0.92810 0.99366 0.93360 1.41877 1.15352 1.25410 1.28704 1.23338 0.96327 0.94637 1.01199 0.91932 0.91960 0.85532 0.89125 0.88980 0.75216 0.85620 0.87343 0.76695 1.24288 1.19394 0.77116 0.72231 0.88103 0.88115 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.06 10.56 113.37 1.20 1.14 16 2 O -0.36 -0.59 10.56 -51.38 -0.54 -1.14 16 3 C 0.47 0.86 7.48 71.24 0.53 1.40 16 4 O -0.54 -3.85 15.65 21.97 0.34 -3.50 16 5 C -0.11 0.44 4.26 -11.01 -0.05 0.39 16 6 H 0.15 -1.18 8.14 -2.38 -0.02 -1.20 16 7 C -0.13 0.51 7.43 31.12 0.23 0.75 16 8 C 0.12 -0.42 4.24 45.53 0.19 -0.22 16 9 H 0.12 -0.08 7.46 -2.39 -0.02 -0.09 16 10 N -0.71 2.29 5.35 -443.94 -2.38 -0.09 16 11 C 0.59 2.64 7.79 86.45 0.67 3.31 16 12 O -0.57 -7.76 16.48 -4.35 -0.07 -7.83 16 13 C -0.07 -0.13 7.06 40.35 0.28 0.15 16 14 C -0.10 -0.58 10.59 22.57 0.24 -0.34 16 15 C -0.22 -0.01 5.43 -20.12 -0.11 -0.12 16 16 C -0.06 -0.02 3.02 71.24 0.22 0.20 16 17 O -0.56 -2.69 12.88 -148.98 -1.92 -4.61 16 18 Si 0.79 -3.46 30.60 68.60 2.10 -1.36 16 19 C 0.06 -0.38 10.45 83.48 0.87 0.49 16 20 N -0.52 3.50 5.99 -183.62 -1.10 2.40 16 21 C -0.12 0.64 7.16 31.13 0.22 0.86 16 22 H 0.06 -0.11 8.13 -2.39 -0.02 -0.13 16 23 H 0.06 -0.12 8.13 -2.39 -0.02 -0.14 16 24 H 0.13 -0.93 8.14 -2.39 -0.02 -0.94 16 25 H 0.09 -0.34 8.09 -2.39 -0.02 -0.36 16 26 H 0.09 -0.33 8.14 -2.39 -0.02 -0.35 16 27 H 0.41 -3.89 7.86 -92.71 -0.73 -4.62 16 28 H 0.13 1.22 8.06 -2.91 -0.02 1.19 16 29 H 0.11 0.08 7.96 -2.39 -0.02 0.06 16 30 H 0.38 -0.60 8.70 -74.06 -0.64 -1.24 16 31 H -0.31 -1.60 7.11 99.48 0.71 -0.89 16 32 H -0.27 0.81 7.11 99.48 0.71 1.52 16 33 H 0.21 -2.95 6.21 -2.91 -0.02 -2.96 16 34 H 0.44 -6.20 8.19 -92.71 -0.76 -6.96 16 35 H 0.10 -0.71 8.14 -2.39 -0.02 -0.73 16 36 H 0.10 -0.47 7.42 -2.39 -0.02 -0.49 16 Total: 0.00 -26.46 315.97 -0.01 -26.47 By element: Atomic # 1 Polarization: -17.40 SS G_CDS: -0.95 Total: -18.35 kcal Atomic # 6 Polarization: 3.50 SS G_CDS: 4.50 Total: 8.01 kcal Atomic # 7 Polarization: 5.79 SS G_CDS: -3.48 Total: 2.31 kcal Atomic # 8 Polarization: -14.90 SS G_CDS: -2.19 Total: -17.08 kcal Atomic # 14 Polarization: -3.46 SS G_CDS: 2.10 Total: -1.36 kcal Total: -26.46 -0.01 -26.47 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10970304_10543058.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -52.112 kcal (2) G-P(sol) polarization free energy of solvation -26.463 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -78.575 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.011 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.474 kcal (6) G-S(sol) free energy of system = (1) + (5) -78.585 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.57 seconds