Wall clock time and date at job start Sat Mar 6 2021 15:33:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45204 * 1 3 3 C 1.34232 * 116.99905 * 2 1 4 4 O 1.20826 * 119.99975 * 359.97438 * 3 2 1 5 5 C 1.50703 * 119.99900 * 180.02562 * 3 2 1 6 6 H 1.08995 * 112.84893 * 311.19620 * 5 3 2 7 7 C 1.53782 * 113.61345 * 82.50158 * 5 3 2 8 8 C 1.53781 * 87.07805 * 139.97993 * 7 5 3 9 9 H 1.08999 * 113.69041 * 89.13120 * 8 7 5 10 10 N 1.46504 * 113.61500 * 220.02084 * 8 7 5 11 11 C 1.34777 * 119.99668 * 252.50027 * 10 8 7 12 12 O 1.21698 * 120.00179 * 354.28316 * 11 10 8 13 13 C 1.46675 * 119.99791 * 174.28165 * 11 10 8 14 14 C 1.37876 * 126.23443 * 4.66089 * 13 11 10 15 15 C 1.39836 * 107.08198 * 179.84593 * 14 13 11 16 16 C 1.50704 * 126.06518 * 180.15803 * 15 14 13 17 17 O 1.42901 * 109.47075 * 300.28326 * 16 15 14 18 18 Si 1.86295 * 109.47303 * 180.28104 * 16 15 14 19 19 C 1.35447 * 107.86942 * 0.41628 * 15 14 13 20 20 N 1.35535 * 108.87051 * 359.74320 * 19 15 14 21 21 C 1.46506 * 125.67814 * 180.02562 * 20 19 15 22 22 C 1.53777 * 113.61316 * 180.02562 * 5 3 2 23 23 H 1.08995 * 109.47292 * 60.00031 * 1 2 3 24 24 H 1.09002 * 109.47037 * 179.97438 * 1 2 3 25 25 H 1.09003 * 109.47026 * 299.99640 * 1 2 3 26 26 H 1.08998 * 113.61324 * 254.52781 * 7 5 3 27 27 H 1.09000 * 113.61273 * 25.43449 * 7 5 3 28 28 H 0.96999 * 119.99961 * 72.49134 * 10 8 7 29 29 H 1.07997 * 126.45416 * 0.02562 * 14 13 11 30 30 H 1.09003 * 109.47081 * 60.27748 * 16 15 14 31 31 H 0.96697 * 113.99997 * 299.99579 * 17 16 15 32 32 H 1.48503 * 109.99957 * 58.68338 * 18 16 15 33 33 H 1.48498 * 110.00119 * 179.97438 * 18 16 15 34 34 H 1.08004 * 125.56396 * 179.71375 * 19 15 14 35 35 H 1.08999 * 109.46995 * 264.27410 * 21 20 19 36 36 H 1.08995 * 109.46699 * 24.27303 * 21 20 19 37 37 H 1.08995 * 109.46699 * 144.27535 * 21 20 19 38 38 H 1.09007 * 113.61595 * 334.57005 * 22 5 3 39 39 H 1.09003 * 113.61500 * 105.46947 * 22 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 -0.0005 5 6 3.5664 1.2749 -0.0006 6 1 4.0240 0.6362 0.7549 7 6 4.1906 1.1238 -1.3979 8 6 5.1807 2.2270 -0.9886 9 1 6.0812 1.8496 -0.5043 10 7 5.4693 3.1836 -2.0601 11 6 6.6670 3.1624 -2.6777 12 8 7.5449 2.4205 -2.2777 13 6 6.9124 4.0334 -3.8321 14 6 6.0480 4.9825 -4.3352 15 6 6.6832 5.5775 -5.4297 16 6 6.1186 6.6753 -6.2941 17 8 4.9037 6.2280 -6.8990 18 14 7.3487 7.1146 -7.6224 19 6 7.8936 4.9882 -5.5785 20 7 8.0451 4.0481 -4.6141 21 6 9.2193 3.1907 -4.4334 22 6 4.1078 2.7142 0.0001 23 1 -0.3633 0.5138 -0.8899 24 1 -0.3633 -1.0277 -0.0005 25 1 -0.3633 0.5138 0.8900 26 1 4.6609 0.1545 -1.5635 27 1 3.5226 1.4153 -2.2083 28 1 4.7983 3.8320 -2.3251 29 1 5.0667 5.2231 -3.9539 30 1 5.9171 7.5535 -5.6806 31 1 5.0080 5.4478 -7.4606 32 1 7.6559 5.9177 -8.4461 33 1 6.8035 8.1957 -8.4821 34 1 8.6194 5.2279 -6.3416 35 1 9.0490 2.2330 -4.9253 36 1 10.0927 3.6738 -4.8713 37 1 9.3895 3.0274 -3.3693 38 1 3.4171 3.4408 -0.4280 39 1 4.5112 3.0285 0.9627 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10970304_10803934.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:33:47 Heat of formation + Delta-G solvation = -70.152295 kcal Electronic energy + Delta-G solvation = -23488.122449 eV Core-core repulsion = 19785.635310 eV Total energy + Delta-G solvation = -3702.487139 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 295.130 amu Computer time = 0.58 seconds Orbital eigenvalues (eV) -42.57972 -41.89584 -40.48817 -38.98037 -37.79790 -37.30913 -34.89346 -33.74044 -31.01368 -29.34613 -28.37856 -26.95811 -26.94936 -25.70231 -24.01979 -22.24439 -21.27783 -21.01967 -20.21778 -18.97733 -18.77415 -17.95085 -17.74723 -17.39608 -16.85462 -16.79154 -16.41578 -16.21158 -15.89636 -15.51630 -15.36883 -15.03931 -14.52665 -14.35721 -14.24170 -13.99724 -13.72675 -13.56434 -13.51721 -13.29305 -13.21473 -13.04210 -12.60631 -12.40464 -12.34841 -11.89457 -11.79464 -11.78010 -11.37678 -11.05485 -10.47632 -10.18924 -9.70027 -9.27798 -4.94676 0.41966 1.14105 1.31672 1.48206 1.55370 1.62496 1.72986 2.00778 2.31370 2.33300 3.14653 3.21894 3.47877 3.53244 3.65586 3.69470 3.76097 3.90370 3.96150 4.15317 4.16152 4.22944 4.26605 4.34845 4.38266 4.45746 4.52315 4.58482 4.62689 4.69476 4.71114 4.76809 4.77540 4.98948 5.16064 5.35154 5.40075 5.65215 5.88091 6.10107 6.40928 6.52167 6.71846 7.12350 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.357 6.357 3 C 0.472 3.528 4 O -0.504 6.504 5 C -0.109 4.109 6 H 0.132 0.868 7 C -0.134 4.134 8 C 0.128 3.872 9 H 0.127 0.873 10 N -0.709 5.709 11 C 0.594 3.406 12 O -0.546 6.546 13 C -0.055 4.055 14 C -0.112 4.112 15 C -0.206 4.206 16 C -0.038 4.038 17 O -0.532 6.532 18 Si 0.680 3.320 19 C 0.029 3.971 20 N -0.404 5.404 21 C 0.065 3.935 22 C -0.127 4.127 23 H 0.064 0.936 24 H 0.103 0.897 25 H 0.064 0.936 26 H 0.090 0.910 27 H 0.092 0.908 28 H 0.406 0.594 29 H 0.145 0.855 30 H 0.115 0.885 31 H 0.374 0.626 32 H -0.260 1.260 33 H -0.258 1.258 34 H 0.174 0.826 35 H 0.078 0.922 36 H 0.088 0.912 37 H 0.103 0.897 38 H 0.104 0.896 39 H 0.090 0.910 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.251 -0.977 0.150 2.459 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.273 6.273 3 C 0.314 3.686 4 O -0.391 6.391 5 C -0.128 4.128 6 H 0.150 0.850 7 C -0.173 4.173 8 C 0.023 3.977 9 H 0.145 0.855 10 N -0.360 5.360 11 C 0.383 3.617 12 O -0.425 6.425 13 C -0.169 4.169 14 C -0.138 4.138 15 C -0.213 4.213 16 C -0.148 4.148 17 O -0.338 6.338 18 Si 0.581 3.419 19 C -0.108 4.108 20 N -0.076 5.076 21 C -0.076 4.076 22 C -0.165 4.165 23 H 0.082 0.918 24 H 0.122 0.878 25 H 0.083 0.917 26 H 0.109 0.891 27 H 0.111 0.889 28 H 0.242 0.758 29 H 0.163 0.837 30 H 0.133 0.867 31 H 0.222 0.778 32 H -0.185 1.185 33 H -0.183 1.183 34 H 0.191 0.809 35 H 0.096 0.904 36 H 0.106 0.894 37 H 0.121 0.879 38 H 0.122 0.878 39 H 0.109 0.891 Dipole moment (debyes) X Y Z Total from point charges 2.880 -0.935 -0.031 3.028 hybrid contribution -1.418 -0.582 -0.437 1.594 sum 1.462 -1.516 -0.468 2.158 Atomic orbital electron populations 1.23328 0.75902 1.04030 1.02725 1.86520 1.23746 1.33267 1.83773 1.23467 0.91567 0.81443 0.72091 1.90688 1.66969 1.36425 1.45055 1.22301 0.87744 1.01028 1.01752 0.84994 1.23472 0.98016 1.01130 0.94703 1.22469 0.97920 0.89401 0.87896 0.85539 1.45568 1.15958 1.37070 1.37359 1.16991 0.82238 0.81166 0.81312 1.90804 1.43666 1.41872 1.66135 1.19999 0.90617 1.06239 1.00007 1.21202 0.99048 0.96703 0.96839 1.19736 0.95974 1.03845 1.01699 1.24283 0.92643 0.96935 1.00987 1.86588 1.30811 1.50219 1.66136 0.95386 0.85184 0.81484 0.79839 1.21876 0.99492 0.93769 0.95667 1.43819 1.13750 1.27928 1.22081 1.22340 0.85214 0.94175 1.05876 1.23397 0.97112 0.94961 1.00994 0.91761 0.87837 0.91695 0.89140 0.88924 0.75797 0.83684 0.86731 0.77842 1.18516 1.18302 0.80941 0.90352 0.89369 0.87855 0.87772 0.89131 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.56 101.05 1.07 1.05 16 2 O -0.36 -0.46 10.57 -39.26 -0.41 -0.88 16 3 C 0.47 0.71 7.48 36.01 0.27 0.98 16 4 O -0.50 -2.13 15.65 -18.75 -0.29 -2.43 16 5 C -0.11 0.16 4.26 -90.96 -0.39 -0.23 16 6 H 0.13 -0.42 8.14 -51.93 -0.42 -0.85 16 7 C -0.13 0.21 7.43 -25.92 -0.19 0.01 16 8 C 0.13 -0.16 4.28 -67.10 -0.29 -0.45 16 9 H 0.13 -0.07 7.41 -51.93 -0.38 -0.46 16 10 N -0.71 0.39 5.34 -54.30 -0.29 0.10 16 11 C 0.59 1.20 7.77 -12.85 -0.10 1.10 16 12 O -0.55 -2.48 14.36 5.19 0.07 -2.41 16 13 C -0.06 -0.08 6.89 -81.98 -0.56 -0.65 16 14 C -0.11 -0.07 10.29 -39.12 -0.40 -0.47 16 15 C -0.21 -0.04 5.44 -105.02 -0.57 -0.61 16 16 C -0.04 0.01 3.02 36.01 0.11 0.12 16 17 O -0.53 -0.71 12.88 -35.23 -0.45 -1.16 16 18 Si 0.68 -0.88 30.59 -169.99 -5.20 -6.08 16 19 C 0.03 -0.01 9.92 -16.91 -0.17 -0.18 16 20 N -0.40 -0.27 3.16 -120.23 -0.38 -0.65 16 21 C 0.06 -0.07 10.48 59.85 0.63 0.56 16 22 C -0.13 0.22 7.16 -25.90 -0.19 0.04 16 23 H 0.06 -0.03 8.13 -51.93 -0.42 -0.46 16 24 H 0.10 -0.30 8.14 -51.93 -0.42 -0.72 16 25 H 0.06 -0.04 8.13 -51.93 -0.42 -0.46 16 26 H 0.09 -0.16 8.14 -51.93 -0.42 -0.58 16 27 H 0.09 -0.10 8.09 -51.93 -0.42 -0.52 16 28 H 0.41 -0.89 7.63 -40.82 -0.31 -1.21 16 29 H 0.15 -0.12 7.45 -52.49 -0.39 -0.51 16 30 H 0.11 -0.09 7.96 -51.93 -0.41 -0.50 16 31 H 0.37 -0.49 8.70 45.56 0.40 -0.10 16 32 H -0.26 -0.14 7.11 56.52 0.40 0.26 16 33 H -0.26 -0.59 7.11 56.52 0.40 -0.19 16 34 H 0.17 -0.56 6.19 -52.48 -0.32 -0.88 16 35 H 0.08 -0.10 8.14 -51.93 -0.42 -0.53 16 36 H 0.09 -0.32 8.12 -51.93 -0.42 -0.75 16 37 H 0.10 0.04 6.55 -51.93 -0.34 -0.30 16 38 H 0.10 -0.10 7.41 -51.92 -0.38 -0.48 16 39 H 0.09 -0.23 8.14 -51.93 -0.42 -0.65 16 LS Contribution 334.21 15.07 5.04 5.04 Total: 0.00 -9.24 334.21 -7.86 -17.09 By element: Atomic # 1 Polarization: -4.73 SS G_CDS: -5.15 Total: -9.88 kcal Atomic # 6 Polarization: 2.04 SS G_CDS: -0.79 Total: 1.25 kcal Atomic # 7 Polarization: 0.12 SS G_CDS: -0.67 Total: -0.55 kcal Atomic # 8 Polarization: -5.79 SS G_CDS: -1.09 Total: -6.87 kcal Atomic # 14 Polarization: -0.88 SS G_CDS: -5.20 Total: -6.08 kcal Total LS contribution 5.04 Total: 5.04 kcal Total: -9.24 -7.86 -17.09 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10970304_10803934.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -53.057 kcal (2) G-P(sol) polarization free energy of solvation -9.237 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -62.294 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.858 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.095 kcal (6) G-S(sol) free energy of system = (1) + (5) -70.152 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.58 seconds