Wall clock time and date at job start Sat Mar 6 2021 15:33:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45204 * 1 3 3 C 1.34232 * 116.99905 * 2 1 4 4 O 1.20826 * 119.99975 * 359.97438 * 3 2 1 5 5 C 1.50703 * 119.99900 * 180.02562 * 3 2 1 6 6 H 1.08995 * 112.84893 * 311.19620 * 5 3 2 7 7 C 1.53782 * 113.61345 * 82.50158 * 5 3 2 8 8 C 1.53781 * 87.07805 * 139.97993 * 7 5 3 9 9 H 1.08999 * 113.69041 * 89.13120 * 8 7 5 10 10 N 1.46504 * 113.61500 * 220.02084 * 8 7 5 11 11 C 1.34777 * 119.99668 * 252.50027 * 10 8 7 12 12 O 1.21698 * 120.00179 * 354.28316 * 11 10 8 13 13 C 1.46675 * 119.99791 * 174.28165 * 11 10 8 14 14 C 1.37876 * 126.23443 * 4.66089 * 13 11 10 15 15 C 1.39836 * 107.08198 * 179.84593 * 14 13 11 16 16 C 1.50704 * 126.06518 * 180.15803 * 15 14 13 17 17 O 1.42901 * 109.47075 * 300.28326 * 16 15 14 18 18 Si 1.86295 * 109.47303 * 180.28104 * 16 15 14 19 19 C 1.35447 * 107.86942 * 0.41628 * 15 14 13 20 20 N 1.35535 * 108.87051 * 359.74320 * 19 15 14 21 21 C 1.46506 * 125.67814 * 180.02562 * 20 19 15 22 22 C 1.53777 * 113.61316 * 180.02562 * 5 3 2 23 23 H 1.08995 * 109.47292 * 60.00031 * 1 2 3 24 24 H 1.09002 * 109.47037 * 179.97438 * 1 2 3 25 25 H 1.09003 * 109.47026 * 299.99640 * 1 2 3 26 26 H 1.08998 * 113.61324 * 254.52781 * 7 5 3 27 27 H 1.09000 * 113.61273 * 25.43449 * 7 5 3 28 28 H 0.96999 * 119.99961 * 72.49134 * 10 8 7 29 29 H 1.07997 * 126.45416 * 0.02562 * 14 13 11 30 30 H 1.09003 * 109.47081 * 60.27748 * 16 15 14 31 31 H 0.96697 * 113.99997 * 299.99579 * 17 16 15 32 32 H 1.48503 * 109.99957 * 58.68338 * 18 16 15 33 33 H 1.48498 * 110.00119 * 179.97438 * 18 16 15 34 34 H 1.08004 * 125.56396 * 179.71375 * 19 15 14 35 35 H 1.08999 * 109.46995 * 264.27410 * 21 20 19 36 36 H 1.08995 * 109.46699 * 24.27303 * 21 20 19 37 37 H 1.08995 * 109.46699 * 144.27535 * 21 20 19 38 38 H 1.09007 * 113.61595 * 334.57005 * 22 5 3 39 39 H 1.09003 * 113.61500 * 105.46947 * 22 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 -0.0005 5 6 3.5664 1.2749 -0.0006 6 1 4.0240 0.6362 0.7549 7 6 4.1906 1.1238 -1.3979 8 6 5.1807 2.2270 -0.9886 9 1 6.0812 1.8496 -0.5043 10 7 5.4693 3.1836 -2.0601 11 6 6.6670 3.1624 -2.6777 12 8 7.5449 2.4205 -2.2777 13 6 6.9124 4.0334 -3.8321 14 6 6.0480 4.9825 -4.3352 15 6 6.6832 5.5775 -5.4297 16 6 6.1186 6.6753 -6.2941 17 8 4.9037 6.2280 -6.8990 18 14 7.3487 7.1146 -7.6224 19 6 7.8936 4.9882 -5.5785 20 7 8.0451 4.0481 -4.6141 21 6 9.2193 3.1907 -4.4334 22 6 4.1078 2.7142 0.0001 23 1 -0.3633 0.5138 -0.8899 24 1 -0.3633 -1.0277 -0.0005 25 1 -0.3633 0.5138 0.8900 26 1 4.6609 0.1545 -1.5635 27 1 3.5226 1.4153 -2.2083 28 1 4.7983 3.8320 -2.3251 29 1 5.0667 5.2231 -3.9539 30 1 5.9171 7.5535 -5.6806 31 1 5.0080 5.4478 -7.4606 32 1 7.6559 5.9177 -8.4461 33 1 6.8035 8.1957 -8.4821 34 1 8.6194 5.2279 -6.3416 35 1 9.0490 2.2330 -4.9253 36 1 10.0927 3.6738 -4.8713 37 1 9.3895 3.0274 -3.3693 38 1 3.4171 3.4408 -0.4280 39 1 4.5112 3.0285 0.9627 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10970304_10803934.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:33:46 Heat of formation + Delta-G solvation = -70.558318 kcal Electronic energy + Delta-G solvation = -23488.140055 eV Core-core repulsion = 19785.635310 eV Total energy + Delta-G solvation = -3702.504745 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 295.130 amu Computer time = 0.68 seconds Orbital eigenvalues (eV) -42.57396 -41.94501 -40.54515 -39.02309 -37.82414 -37.44441 -34.92820 -33.72619 -31.01382 -29.33577 -28.32307 -26.92615 -26.85230 -25.67604 -24.03817 -22.27350 -21.28448 -21.00927 -20.19650 -19.00505 -18.77869 -18.03117 -17.78081 -17.46031 -16.86149 -16.79839 -16.40408 -16.15529 -15.91390 -15.51766 -15.38170 -15.03887 -14.53762 -14.39907 -14.28068 -14.00041 -13.65680 -13.53812 -13.48653 -13.23083 -13.14929 -13.01909 -12.53124 -12.44575 -12.34438 -11.87113 -11.82818 -11.79778 -11.44845 -11.17037 -10.48098 -10.21739 -9.69406 -9.27161 -4.85889 0.38323 1.04300 1.37454 1.51475 1.57990 1.67519 1.76119 2.04643 2.25119 2.35402 3.22209 3.29829 3.53767 3.61057 3.69521 3.75502 3.84637 4.01625 4.04065 4.24231 4.24735 4.26860 4.37874 4.40318 4.48493 4.55596 4.61146 4.66914 4.73275 4.74135 4.79327 4.80855 4.90486 5.05194 5.18772 5.31235 5.42275 5.66686 5.87969 6.16851 6.41202 6.61048 6.63002 7.06690 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.363 6.363 3 C 0.471 3.529 4 O -0.537 6.537 5 C -0.104 4.104 6 H 0.154 0.846 7 C -0.129 4.129 8 C 0.128 3.872 9 H 0.122 0.878 10 N -0.700 5.700 11 C 0.590 3.410 12 O -0.578 6.578 13 C -0.079 4.079 14 C -0.114 4.114 15 C -0.217 4.217 16 C -0.048 4.048 17 O -0.552 6.552 18 Si 0.771 3.229 19 C 0.037 3.963 20 N -0.412 5.412 21 C 0.063 3.937 22 C -0.120 4.120 23 H 0.060 0.940 24 H 0.128 0.872 25 H 0.062 0.938 26 H 0.095 0.905 27 H 0.087 0.913 28 H 0.414 0.586 29 H 0.153 0.847 30 H 0.118 0.882 31 H 0.384 0.616 32 H -0.279 1.279 33 H -0.309 1.309 34 H 0.201 0.799 35 H 0.078 0.922 36 H 0.117 0.883 37 H 0.085 0.915 38 H 0.096 0.904 39 H 0.101 0.899 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.891 -1.129 -0.028 3.104 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.279 6.279 3 C 0.315 3.685 4 O -0.427 6.427 5 C -0.123 4.123 6 H 0.172 0.828 7 C -0.168 4.168 8 C 0.024 3.976 9 H 0.140 0.860 10 N -0.350 5.350 11 C 0.380 3.620 12 O -0.460 6.460 13 C -0.192 4.192 14 C -0.140 4.140 15 C -0.224 4.224 16 C -0.157 4.157 17 O -0.360 6.360 18 Si 0.676 3.324 19 C -0.101 4.101 20 N -0.083 5.083 21 C -0.077 4.077 22 C -0.158 4.158 23 H 0.079 0.921 24 H 0.146 0.854 25 H 0.080 0.920 26 H 0.114 0.886 27 H 0.106 0.894 28 H 0.251 0.749 29 H 0.171 0.829 30 H 0.135 0.865 31 H 0.232 0.768 32 H -0.206 1.206 33 H -0.238 1.238 34 H 0.218 0.782 35 H 0.097 0.903 36 H 0.136 0.864 37 H 0.104 0.896 38 H 0.114 0.886 39 H 0.119 0.881 Dipole moment (debyes) X Y Z Total from point charges 3.497 -1.110 -0.177 3.673 hybrid contribution -1.691 -0.521 -0.418 1.818 sum 1.806 -1.632 -0.595 2.506 Atomic orbital electron populations 1.23524 0.75066 1.05582 1.02448 1.86522 1.24739 1.33190 1.83478 1.24003 0.92533 0.81004 0.70956 1.90671 1.67890 1.37381 1.46720 1.22426 0.85905 1.01620 1.02356 0.82814 1.23428 0.97643 1.01220 0.94521 1.22474 0.97841 0.89483 0.87851 0.85993 1.45548 1.15431 1.37033 1.37005 1.17173 0.82422 0.80917 0.81489 1.90780 1.44710 1.43317 1.67151 1.20069 0.91548 1.06994 1.00573 1.21403 0.99334 0.96370 0.96903 1.19831 0.96449 1.04287 1.01808 1.24533 0.92628 0.96895 1.01635 1.86556 1.31978 1.50914 1.66576 0.94354 0.83425 0.77620 0.76978 1.22330 0.99670 0.92623 0.95432 1.44039 1.13895 1.28252 1.22153 1.22418 0.85736 0.94494 1.05031 1.23350 0.96515 0.94712 1.01258 0.92109 0.85423 0.91950 0.88620 0.89450 0.74914 0.82921 0.86463 0.76758 1.20553 1.23774 0.78205 0.90350 0.86443 0.89609 0.88581 0.88051 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 113.37 1.20 1.17 16 2 O -0.36 -0.99 10.57 -51.43 -0.54 -1.54 16 3 C 0.47 1.61 7.48 71.24 0.53 2.15 16 4 O -0.54 -5.07 15.65 21.96 0.34 -4.72 16 5 C -0.10 0.31 4.26 -11.01 -0.05 0.26 16 6 H 0.15 -1.13 8.14 -2.39 -0.02 -1.15 16 7 C -0.13 0.37 7.43 31.12 0.23 0.60 16 8 C 0.13 -0.26 4.28 45.53 0.19 -0.07 16 9 H 0.12 -0.07 7.41 -2.39 -0.02 -0.09 16 10 N -0.70 0.24 5.34 -443.93 -2.37 -2.13 16 11 C 0.59 2.97 7.77 86.45 0.67 3.64 16 12 O -0.58 -6.02 14.36 -4.34 -0.06 -6.08 16 13 C -0.08 -0.28 6.89 40.35 0.28 0.00 16 14 C -0.11 -0.17 10.29 22.57 0.23 0.06 16 15 C -0.22 0.02 5.44 -20.12 -0.11 -0.09 16 16 C -0.05 0.04 3.02 71.24 0.22 0.26 16 17 O -0.55 -1.53 12.88 -148.98 -1.92 -3.44 16 18 Si 0.77 -2.50 30.59 68.60 2.10 -0.40 16 19 C 0.04 -0.08 9.92 83.48 0.83 0.75 16 20 N -0.41 -0.47 3.16 -534.31 -1.69 -2.16 16 21 C 0.06 -0.15 10.48 127.77 1.34 1.19 16 22 C -0.12 0.40 7.16 31.13 0.22 0.62 16 23 H 0.06 -0.02 8.13 -2.39 -0.02 -0.04 16 24 H 0.13 -0.82 8.14 -2.39 -0.02 -0.84 16 25 H 0.06 -0.03 8.13 -2.39 -0.02 -0.05 16 26 H 0.10 -0.35 8.14 -2.39 -0.02 -0.37 16 27 H 0.09 -0.14 8.09 -2.39 -0.02 -0.16 16 28 H 0.41 -1.51 7.63 -92.71 -0.71 -2.22 16 29 H 0.15 -0.18 7.45 -2.91 -0.02 -0.20 16 30 H 0.12 -0.21 7.96 -2.39 -0.02 -0.23 16 31 H 0.38 -0.98 8.70 -74.06 -0.64 -1.63 16 32 H -0.28 0.02 7.11 99.48 0.71 0.73 16 33 H -0.31 -1.68 7.11 99.48 0.71 -0.97 16 34 H 0.20 -1.74 6.19 -2.91 -0.02 -1.75 16 35 H 0.08 -0.19 8.14 -2.39 -0.02 -0.21 16 36 H 0.12 -1.03 8.12 -2.39 -0.02 -1.05 16 37 H 0.09 0.15 6.55 -2.39 -0.02 0.13 16 38 H 0.10 -0.12 7.41 -2.38 -0.02 -0.13 16 39 H 0.10 -0.54 8.14 -2.39 -0.02 -0.56 16 Total: 0.00 -22.15 334.21 1.42 -20.73 By element: Atomic # 1 Polarization: -10.56 SS G_CDS: -0.22 Total: -10.79 kcal Atomic # 6 Polarization: 4.75 SS G_CDS: 5.79 Total: 10.53 kcal Atomic # 7 Polarization: -0.23 SS G_CDS: -4.06 Total: -4.29 kcal Atomic # 8 Polarization: -13.60 SS G_CDS: -2.18 Total: -15.78 kcal Atomic # 14 Polarization: -2.50 SS G_CDS: 2.10 Total: -0.40 kcal Total: -22.15 1.42 -20.73 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10970304_10803934.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -49.828 kcal (2) G-P(sol) polarization free energy of solvation -22.154 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -71.981 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.423 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.731 kcal (6) G-S(sol) free energy of system = (1) + (5) -70.558 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.68 seconds