Wall clock time and date at job start Sat Mar 6 2021 15:33:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45197 * 1 3 3 C 1.34221 * 117.00226 * 2 1 4 4 O 1.20828 * 120.00197 * 359.97438 * 3 2 1 5 5 C 1.50701 * 120.00207 * 180.02562 * 3 2 1 6 6 H 1.09004 * 112.84711 * 311.19450 * 5 3 2 7 7 C 1.53951 * 113.74665 * 82.39962 * 5 3 2 8 8 C 1.53777 * 87.02178 * 139.94836 * 7 5 3 9 9 H 1.08994 * 113.61571 * 89.22670 * 8 7 5 10 10 N 1.46499 * 113.61524 * 220.05234 * 8 7 5 11 11 C 1.34780 * 119.99858 * 254.13860 * 10 8 7 12 12 O 1.21697 * 119.99987 * 5.11135 * 11 10 8 13 13 C 1.46678 * 120.00073 * 185.11946 * 11 10 8 14 14 C 1.37874 * 126.23382 * 5.37397 * 13 11 10 15 15 C 1.39831 * 107.08395 * 180.23944 * 14 13 11 16 16 C 1.35453 * 107.86709 * 359.76034 * 15 14 13 17 17 C 1.50696 * 125.56252 * 179.97438 * 16 15 14 18 18 O 1.42906 * 109.46926 * 210.02286 * 17 16 15 19 19 Si 1.86299 * 109.47256 * 330.02423 * 17 16 15 20 20 N 1.35529 * 108.86705 * 0.02562 * 16 15 14 21 21 C 1.46508 * 125.67162 * 179.97438 * 20 16 15 22 22 C 1.53776 * 113.61594 * 180.02562 * 5 3 2 23 23 H 1.09002 * 109.47014 * 300.00461 * 1 2 3 24 24 H 1.09001 * 109.47005 * 59.99907 * 1 2 3 25 25 H 1.08999 * 109.47737 * 180.02562 * 1 2 3 26 26 H 1.09000 * 113.61445 * 25.42532 * 7 5 3 27 27 H 1.09009 * 113.66602 * 254.47727 * 7 5 3 28 28 H 0.97000 * 120.00097 * 74.12455 * 10 8 7 29 29 H 1.08009 * 126.45485 * 359.97438 * 14 13 11 30 30 H 1.08006 * 126.06635 * 179.78156 * 15 14 13 31 31 H 1.09002 * 109.47211 * 90.02678 * 17 16 15 32 32 H 0.96697 * 113.99848 * 180.02562 * 18 17 16 33 33 H 1.48499 * 110.00003 * 299.99745 * 19 17 16 34 34 H 1.48499 * 109.99881 * 61.32088 * 19 17 16 35 35 H 1.08998 * 109.47322 * 84.19670 * 21 20 16 36 36 H 1.08993 * 109.46871 * 324.18995 * 21 20 16 37 37 H 1.09003 * 109.46377 * 204.19515 * 21 20 16 38 38 H 1.09004 * 113.61733 * 105.38702 * 22 5 3 39 39 H 1.09001 * 113.69312 * 334.49146 * 22 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4034 2.2093 -0.0005 5 6 3.5663 1.2748 -0.0006 6 1 4.0239 0.6361 0.7550 7 6 4.1946 1.1214 -1.3976 8 6 5.1821 2.2262 -0.9868 9 1 6.0819 1.8491 -0.5009 10 7 5.4723 3.1821 -2.0584 11 6 6.6594 3.1405 -2.6953 12 8 7.4531 2.2525 -2.4456 13 6 6.9947 4.1658 -3.6893 14 6 6.2433 5.2804 -3.9957 15 6 6.9293 5.9760 -4.9961 16 6 8.0652 5.2922 -5.2735 17 6 9.1004 5.6896 -6.2940 18 8 9.7292 4.5173 -6.8160 19 14 8.2787 6.6236 -7.6808 20 7 8.1181 4.1917 -4.4842 21 6 9.1900 3.1931 -4.4814 22 6 4.1078 2.7140 0.0001 23 1 -0.3633 0.5139 0.8900 24 1 -0.3633 0.5139 -0.8900 25 1 -0.3634 -1.0276 0.0005 26 1 3.5284 1.4112 -2.2102 27 1 4.6667 0.1525 -1.5611 28 1 4.8100 3.8449 -2.3096 29 1 5.3002 5.5610 -3.5502 30 1 6.6102 6.8954 -5.4644 31 1 9.8503 6.3248 -5.8224 32 1 10.4087 4.6980 -7.4798 33 1 7.2541 5.7684 -8.3320 34 1 7.6483 7.8614 -7.1559 35 1 10.0031 3.5346 -3.8409 36 1 9.5608 3.0553 -5.4971 37 1 8.8034 2.2463 -4.1042 38 1 4.5100 3.0288 0.9631 39 1 3.4187 3.4415 -0.4290 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10970304_10803936.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:33:49 Heat of formation + Delta-G solvation = -68.504871 kcal Electronic energy + Delta-G solvation = -23548.726540 eV Core-core repulsion = 19846.310840 eV Total energy + Delta-G solvation = -3702.415701 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 295.130 amu Computer time = 0.59 seconds Orbital eigenvalues (eV) -42.56679 -41.88769 -40.48703 -38.96424 -37.79790 -37.30992 -34.85689 -33.58768 -31.53008 -29.42005 -27.61956 -27.32064 -26.94376 -26.09703 -23.38104 -22.35124 -21.43915 -20.92107 -20.11866 -18.96212 -18.64267 -18.41819 -17.92009 -17.38623 -17.06804 -16.74558 -16.35884 -16.17694 -15.89955 -15.32203 -15.23479 -14.86138 -14.51580 -14.33786 -14.24935 -13.84706 -13.71573 -13.64757 -13.54633 -13.15015 -13.07336 -12.99361 -12.61948 -12.58135 -12.36486 -11.90334 -11.87709 -11.79369 -11.37289 -10.98525 -10.64835 -10.16957 -9.73250 -9.07573 -5.05211 0.41313 1.09066 1.14589 1.51944 1.59635 1.69715 1.80589 2.02541 2.36047 2.41648 3.03706 3.15125 3.22934 3.56523 3.62104 3.67019 3.74260 3.96643 4.03716 4.15409 4.22853 4.27567 4.33184 4.38888 4.46315 4.48388 4.53264 4.58552 4.59692 4.71415 4.78989 4.91167 4.98328 5.02665 5.12091 5.36019 5.41554 5.70043 5.99643 6.16163 6.39928 6.44594 6.71986 7.15346 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.357 6.357 3 C 0.472 3.528 4 O -0.505 6.505 5 C -0.109 4.109 6 H 0.132 0.868 7 C -0.134 4.134 8 C 0.130 3.870 9 H 0.124 0.876 10 N -0.709 5.709 11 C 0.594 3.406 12 O -0.543 6.543 13 C -0.054 4.054 14 C -0.134 4.134 15 C -0.213 4.213 16 C 0.061 3.939 17 C -0.053 4.053 18 O -0.551 6.551 19 Si 0.717 3.283 20 N -0.385 5.385 21 C 0.058 3.942 22 C -0.126 4.126 23 H 0.064 0.936 24 H 0.064 0.936 25 H 0.103 0.897 26 H 0.092 0.908 27 H 0.091 0.909 28 H 0.406 0.594 29 H 0.148 0.852 30 H 0.145 0.855 31 H 0.081 0.919 32 H 0.387 0.613 33 H -0.253 1.253 34 H -0.253 1.253 35 H 0.072 0.928 36 H 0.108 0.892 37 H 0.100 0.900 38 H 0.090 0.910 39 H 0.104 0.896 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.876 1.284 -2.319 3.248 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.273 6.273 3 C 0.315 3.685 4 O -0.392 6.392 5 C -0.129 4.129 6 H 0.150 0.850 7 C -0.172 4.172 8 C 0.025 3.975 9 H 0.142 0.858 10 N -0.360 5.360 11 C 0.383 3.617 12 O -0.422 6.422 13 C -0.168 4.168 14 C -0.160 4.160 15 C -0.236 4.236 16 C -0.058 4.058 17 C -0.163 4.163 18 O -0.358 6.358 19 Si 0.615 3.385 20 N -0.057 5.057 21 C -0.082 4.082 22 C -0.164 4.164 23 H 0.083 0.917 24 H 0.082 0.918 25 H 0.122 0.878 26 H 0.110 0.890 27 H 0.109 0.891 28 H 0.241 0.759 29 H 0.166 0.834 30 H 0.162 0.838 31 H 0.099 0.901 32 H 0.236 0.764 33 H -0.177 1.177 34 H -0.178 1.178 35 H 0.090 0.910 36 H 0.127 0.873 37 H 0.118 0.882 38 H 0.109 0.891 39 H 0.122 0.878 Dipole moment (debyes) X Y Z Total from point charges 1.355 0.668 -1.996 2.503 hybrid contribution -0.646 0.174 0.616 0.910 sum 0.708 0.842 -1.380 1.765 Atomic orbital electron populations 1.23327 0.75909 1.04039 1.02708 1.86518 1.23741 1.33260 1.83752 1.23459 0.91556 0.81437 0.72054 1.90685 1.66985 1.36428 1.45121 1.22335 0.87732 1.00947 1.01844 0.84996 1.23491 0.97929 1.01234 0.94595 1.22452 0.97863 0.89434 0.87780 0.85779 1.45570 1.16879 1.36418 1.37119 1.16969 0.81638 0.83262 0.79831 1.90797 1.49415 1.36587 1.65362 1.20027 0.92537 1.01104 1.03150 1.21256 1.00257 0.94581 0.99901 1.20529 0.95816 1.03273 1.04022 1.20089 0.98544 0.90636 0.96495 1.24547 0.97589 0.93078 1.01047 1.86370 1.57722 1.30339 1.61410 0.95449 0.84187 0.78445 0.80383 1.43770 1.16531 1.18691 1.26672 1.22580 0.88538 0.91627 1.05454 1.23389 0.97072 0.94997 1.00949 0.91707 0.91768 0.87821 0.88968 0.89064 0.75852 0.83445 0.83765 0.90098 0.76355 1.17699 1.17788 0.90952 0.87340 0.88192 0.89124 0.87779 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 10.56 101.05 1.07 1.05 16 2 O -0.36 -0.56 10.56 -39.23 -0.41 -0.98 16 3 C 0.47 0.85 7.49 36.01 0.27 1.12 16 4 O -0.50 -2.25 15.65 -18.75 -0.29 -2.54 16 5 C -0.11 0.11 4.25 -90.87 -0.39 -0.28 16 6 H 0.13 -0.37 8.14 -51.93 -0.42 -0.79 16 7 C -0.13 0.11 7.45 -25.83 -0.19 -0.08 16 8 C 0.13 -0.07 4.18 -67.10 -0.28 -0.35 16 9 H 0.12 0.01 7.57 -51.93 -0.39 -0.39 16 10 N -0.71 -0.24 5.34 -54.30 -0.29 -0.53 16 11 C 0.59 2.08 7.77 -12.85 -0.10 1.98 16 12 O -0.54 -3.31 14.27 5.19 0.07 -3.24 16 13 C -0.05 -0.20 6.89 -81.98 -0.56 -0.76 16 14 C -0.13 -0.29 10.35 -39.12 -0.40 -0.69 16 15 C -0.21 -0.56 9.37 -39.98 -0.37 -0.94 16 16 C 0.06 0.18 6.18 -81.96 -0.51 -0.33 16 17 C -0.05 0.03 2.98 36.00 0.11 0.14 16 18 O -0.55 0.69 9.80 -35.23 -0.35 0.35 16 19 Si 0.72 -1.26 31.22 -169.99 -5.31 -6.57 16 20 N -0.39 -1.49 3.16 -115.62 -0.37 -1.86 16 21 C 0.06 0.15 10.23 59.85 0.61 0.76 16 22 C -0.13 0.18 7.16 -25.90 -0.19 -0.01 16 23 H 0.06 -0.02 8.13 -51.93 -0.42 -0.45 16 24 H 0.06 -0.02 8.13 -51.93 -0.42 -0.44 16 25 H 0.10 -0.28 8.14 -51.93 -0.42 -0.70 16 26 H 0.09 -0.04 8.10 -51.93 -0.42 -0.46 16 27 H 0.09 -0.09 8.14 -51.92 -0.42 -0.51 16 28 H 0.41 -0.65 7.66 -40.82 -0.31 -0.96 16 29 H 0.15 -0.12 7.49 -52.48 -0.39 -0.51 16 30 H 0.14 0.19 6.69 -52.48 -0.35 -0.16 16 31 H 0.08 -0.18 7.96 -51.93 -0.41 -0.59 16 32 H 0.39 -2.46 8.74 45.56 0.40 -2.06 16 33 H -0.25 -0.56 7.11 56.52 0.40 -0.16 16 34 H -0.25 -0.11 6.87 56.52 0.39 0.28 16 35 H 0.07 0.14 8.14 -51.93 -0.42 -0.29 16 36 H 0.11 0.18 5.48 -51.93 -0.28 -0.10 16 37 H 0.10 0.37 6.10 -51.93 -0.32 0.06 16 38 H 0.09 -0.20 8.14 -51.93 -0.42 -0.62 16 39 H 0.10 -0.07 7.41 -51.93 -0.38 -0.46 16 LS Contribution 329.01 15.07 4.96 4.96 Total: 0.00 -10.16 329.01 -7.96 -18.12 By element: Atomic # 1 Polarization: -4.28 SS G_CDS: -5.04 Total: -9.32 kcal Atomic # 6 Polarization: 2.55 SS G_CDS: -0.94 Total: 1.61 kcal Atomic # 7 Polarization: -1.73 SS G_CDS: -0.66 Total: -2.39 kcal Atomic # 8 Polarization: -5.43 SS G_CDS: -0.98 Total: -6.41 kcal Atomic # 14 Polarization: -1.26 SS G_CDS: -5.31 Total: -6.57 kcal Total LS contribution 4.96 Total: 4.96 kcal Total: -10.16 -7.96 -18.12 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10970304_10803936.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -50.381 kcal (2) G-P(sol) polarization free energy of solvation -10.160 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -60.541 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.964 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.124 kcal (6) G-S(sol) free energy of system = (1) + (5) -68.505 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.59 seconds