Wall clock time and date at job start Sat Mar 6 2021 15:33:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45203 * 1 3 3 C 1.34230 * 116.99751 * 2 1 4 4 O 1.20826 * 120.00098 * 0.02562 * 3 2 1 5 5 C 1.50702 * 119.99932 * 179.97438 * 3 2 1 6 6 H 1.08999 * 112.90399 * 311.25486 * 5 3 2 7 7 C 1.53777 * 113.61177 * 82.50333 * 5 3 2 8 8 C 1.53777 * 87.07949 * 139.98403 * 7 5 3 9 9 H 1.08996 * 113.69550 * 89.12997 * 8 7 5 10 10 N 1.46507 * 113.61448 * 220.02098 * 8 7 5 11 11 C 1.34777 * 119.99630 * 252.49568 * 10 8 7 12 12 O 1.21720 * 120.00720 * 0.02562 * 11 10 8 13 13 C 1.46571 * 119.99615 * 179.97438 * 11 10 8 14 14 C 1.40858 * 126.57580 * 180.02562 * 13 11 10 15 15 C 1.40087 * 132.87147 * 359.94288 * 14 13 11 16 16 C 1.36447 * 119.25501 * 180.02562 * 15 14 13 17 17 C 1.50708 * 120.29387 * 179.97438 * 16 15 14 18 18 O 1.42897 * 109.46810 * 239.99919 * 17 16 15 19 19 Si 1.86297 * 109.47208 * 119.99858 * 17 16 15 20 20 C 1.40158 * 119.41356 * 359.97438 * 16 15 14 21 21 C 1.35191 * 120.31288 * 359.97438 * 20 16 15 22 22 N 1.36235 * 120.70597 * 0.03678 * 21 20 16 23 23 N 1.40024 * 132.00835 * 179.64561 * 22 21 20 24 24 C 1.30737 * 109.60604 * 179.86087 * 23 22 21 25 25 C 1.53771 * 113.61639 * 180.02562 * 5 3 2 26 26 H 1.08995 * 109.47161 * 299.99982 * 1 2 3 27 27 H 1.09005 * 109.47117 * 60.00368 * 1 2 3 28 28 H 1.09000 * 109.47019 * 179.97438 * 1 2 3 29 29 H 1.09001 * 113.62047 * 25.43427 * 7 5 3 30 30 H 1.09002 * 113.61745 * 254.52789 * 7 5 3 31 31 H 0.96998 * 120.00249 * 72.49012 * 10 8 7 32 32 H 1.08005 * 120.36822 * 0.02562 * 15 14 13 33 33 H 1.09005 * 109.47085 * 359.97438 * 17 16 15 34 34 H 0.96702 * 113.99881 * 179.97438 * 18 17 16 35 35 H 1.48498 * 109.99982 * 298.67706 * 19 17 16 36 36 H 1.48501 * 109.99985 * 59.99849 * 19 17 16 37 37 H 1.07999 * 119.84156 * 180.02562 * 20 16 15 38 38 H 1.07996 * 119.64164 * 180.02562 * 21 20 16 39 39 H 1.07995 * 125.62973 * 180.15218 * 24 23 22 40 40 H 1.09000 * 113.62002 * 105.47041 * 25 5 3 41 41 H 1.09003 * 113.61540 * 334.56765 * 25 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2749 0.0006 6 1 4.0243 0.6361 0.7557 7 6 4.1916 1.1233 -1.3961 8 6 5.1814 2.2267 -0.9865 9 1 6.0816 1.8495 -0.5013 10 7 5.4708 3.1828 -2.0582 11 6 6.6690 3.1614 -2.6748 12 8 7.5106 2.3474 -2.3418 13 6 6.9584 4.1176 -3.7473 14 6 8.1562 4.2180 -4.4816 15 6 9.3625 3.5070 -4.4395 16 6 10.3666 3.8457 -5.2991 17 6 11.6742 3.0968 -5.2735 18 8 12.7374 4.0048 -4.9785 19 14 11.9722 2.3107 -6.9360 20 6 10.1711 4.8962 -6.2061 21 6 8.9981 5.5679 -6.2297 22 7 7.9898 5.2373 -5.3753 23 7 6.7060 5.7653 -5.1919 24 6 6.0930 5.1083 -4.2423 25 6 4.1077 2.7142 0.0011 26 1 -0.3633 0.5138 0.8899 27 1 -0.3634 0.5138 -0.8901 28 1 -0.3633 -1.0277 -0.0005 29 1 3.5243 1.4145 -2.2073 30 1 4.6621 0.1540 -1.5611 31 1 4.8001 3.8312 -2.3239 32 1 9.4962 2.6998 -3.7344 33 1 11.6346 2.3228 -4.5070 34 1 13.6106 3.5907 -4.9455 35 1 10.8899 1.3404 -7.2404 36 1 12.0283 3.3559 -7.9894 37 1 10.9610 5.1698 -6.8899 38 1 8.8591 6.3753 -6.9333 39 1 5.0894 5.2992 -3.8919 40 1 4.5105 3.0289 0.9639 41 1 3.4174 3.4406 -0.4279 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10970304_11618758.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:33:52 Heat of formation + Delta-G solvation = -12.190372 kcal Electronic energy + Delta-G solvation = -27421.200033 eV Core-core repulsion = 23271.121980 eV Total energy + Delta-G solvation = -4150.078053 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 332.125 amu Computer time = 0.98 seconds Orbital eigenvalues (eV) -43.30821 -41.89465 -40.54657 -39.31921 -38.83587 -37.33929 -37.28022 -34.51111 -34.17184 -32.18059 -30.47482 -29.30558 -27.53980 -26.88921 -26.67445 -24.98148 -23.80701 -23.04636 -22.16098 -21.34863 -20.60646 -19.15855 -18.92303 -18.47369 -18.04466 -17.75945 -17.52958 -17.33353 -16.94251 -16.81030 -16.35006 -16.22186 -15.85884 -15.57835 -15.45675 -15.00233 -14.61593 -14.39325 -14.30208 -14.19639 -13.93933 -13.66554 -13.50353 -13.34803 -13.05401 -13.00307 -12.64518 -12.52440 -12.31753 -12.09689 -11.94168 -11.83479 -11.77762 -11.59847 -11.33597 -10.79910 -10.77455 -10.29815 -10.04292 -8.78981 -5.17112 -0.58914 -0.14406 0.98355 1.04075 1.12082 1.17181 1.51837 1.67125 1.84907 2.00342 2.29907 2.54057 2.95682 3.10617 3.20933 3.29402 3.40298 3.59276 3.64134 3.66439 3.71586 3.82864 3.94578 4.00418 4.13415 4.16603 4.22997 4.24018 4.29320 4.47509 4.51525 4.51968 4.58123 4.60067 4.71070 4.76709 4.83632 5.06080 5.07798 5.13674 5.23910 5.39032 5.53606 5.62770 6.29620 6.44588 6.57530 6.74276 7.35443 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.357 6.357 3 C 0.472 3.528 4 O -0.505 6.505 5 C -0.109 4.109 6 H 0.132 0.868 7 C -0.134 4.134 8 C 0.130 3.870 9 H 0.125 0.875 10 N -0.718 5.718 11 C 0.604 3.396 12 O -0.548 6.548 13 C -0.317 4.317 14 C 0.168 3.832 15 C -0.093 4.093 16 C -0.030 4.030 17 C -0.073 4.073 18 O -0.543 6.543 19 Si 0.703 3.297 20 C -0.146 4.146 21 C 0.114 3.886 22 N -0.265 5.265 23 N -0.311 5.311 24 C 0.120 3.880 25 C -0.127 4.127 26 H 0.064 0.936 27 H 0.063 0.937 28 H 0.103 0.897 29 H 0.091 0.909 30 H 0.090 0.910 31 H 0.401 0.599 32 H 0.165 0.835 33 H 0.083 0.917 34 H 0.388 0.612 35 H -0.256 1.256 36 H -0.249 1.249 37 H 0.162 0.838 38 H 0.178 0.822 39 H 0.200 0.800 40 H 0.089 0.911 41 H 0.103 0.897 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.195 -2.688 -1.192 4.343 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.273 6.273 3 C 0.315 3.685 4 O -0.393 6.393 5 C -0.129 4.129 6 H 0.150 0.850 7 C -0.173 4.173 8 C 0.025 3.975 9 H 0.143 0.857 10 N -0.369 5.369 11 C 0.394 3.606 12 O -0.427 6.427 13 C -0.331 4.331 14 C 0.047 3.953 15 C -0.113 4.113 16 C -0.036 4.036 17 C -0.182 4.182 18 O -0.349 6.349 19 Si 0.602 3.398 20 C -0.167 4.167 21 C -0.012 4.012 22 N -0.029 5.029 23 N -0.132 5.132 24 C -0.061 4.061 25 C -0.165 4.165 26 H 0.083 0.917 27 H 0.082 0.918 28 H 0.122 0.878 29 H 0.109 0.891 30 H 0.108 0.892 31 H 0.235 0.765 32 H 0.183 0.817 33 H 0.101 0.899 34 H 0.236 0.764 35 H -0.180 1.180 36 H -0.173 1.173 37 H 0.179 0.821 38 H 0.196 0.804 39 H 0.216 0.784 40 H 0.107 0.893 41 H 0.121 0.879 Dipole moment (debyes) X Y Z Total from point charges 2.518 -1.655 -2.595 3.977 hybrid contribution -1.091 0.014 0.862 1.390 sum 1.427 -1.641 -1.733 2.781 Atomic orbital electron populations 1.23323 0.75965 1.04013 1.02687 1.86523 1.23698 1.33306 1.83774 1.23499 0.91606 0.81407 0.72010 1.90681 1.66998 1.36440 1.45154 1.22316 0.87611 1.01077 1.01891 0.85039 1.23467 0.98040 1.01324 0.94501 1.22397 0.97725 0.89422 0.87958 0.85680 1.45632 1.16192 1.37260 1.37791 1.16839 0.81479 0.82123 0.80171 1.90777 1.46649 1.39589 1.65697 1.19597 0.95304 1.08803 1.09434 1.19236 0.95209 0.89887 0.90944 1.20701 0.89705 1.01167 0.99709 1.19448 0.95164 0.94685 0.94258 1.24701 0.86151 0.95252 1.12141 1.86476 1.17654 1.36412 1.94391 0.95319 0.88805 0.80985 0.74683 1.20848 0.96825 0.97263 1.01769 1.21586 0.85244 1.00639 0.93724 1.46100 1.11485 1.22049 1.23287 1.77645 0.88713 1.23178 1.23646 1.24083 0.99380 0.91074 0.91547 1.23397 0.97217 0.94867 1.01053 0.91718 0.91797 0.87847 0.89065 0.89178 0.76463 0.81714 0.89927 0.76399 1.17991 1.17286 0.82050 0.80443 0.78379 0.89259 0.87911 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.56 101.05 1.07 1.05 16 2 O -0.36 -0.54 10.57 -39.26 -0.41 -0.95 16 3 C 0.47 0.81 7.48 36.01 0.27 1.08 16 4 O -0.51 -2.21 15.65 -18.75 -0.29 -2.50 16 5 C -0.11 0.12 4.26 -90.97 -0.39 -0.27 16 6 H 0.13 -0.37 8.14 -51.93 -0.42 -0.79 16 7 C -0.13 0.15 7.43 -25.92 -0.19 -0.05 16 8 C 0.13 -0.09 4.24 -67.10 -0.28 -0.38 16 9 H 0.13 0.01 7.46 -51.93 -0.39 -0.37 16 10 N -0.72 0.08 5.35 -54.34 -0.29 -0.21 16 11 C 0.60 1.87 7.78 -12.90 -0.10 1.77 16 12 O -0.55 -3.26 15.30 5.17 0.08 -3.18 16 13 C -0.32 -0.97 6.17 -104.67 -0.65 -1.61 16 14 C 0.17 0.65 6.76 -84.07 -0.57 0.08 16 15 C -0.09 -0.26 9.35 -39.53 -0.37 -0.63 16 16 C -0.03 -0.04 4.53 -104.54 -0.47 -0.51 16 17 C -0.07 0.10 2.80 36.01 0.10 0.20 16 18 O -0.54 0.75 12.76 -35.23 -0.45 0.31 16 19 Si 0.70 -1.69 31.97 -169.99 -5.43 -7.13 16 20 C -0.15 -0.07 8.67 -39.95 -0.35 -0.41 16 21 C 0.11 0.10 11.17 -16.68 -0.19 -0.08 16 22 N -0.26 -0.89 3.86 -10.55 -0.04 -0.93 16 23 N -0.31 -1.11 12.57 30.75 0.39 -0.72 16 24 C 0.12 0.17 11.44 -17.14 -0.20 -0.03 16 25 C -0.13 0.18 7.16 -25.91 -0.19 0.00 16 26 H 0.06 -0.03 8.13 -51.93 -0.42 -0.45 16 27 H 0.06 -0.03 8.13 -51.93 -0.42 -0.45 16 28 H 0.10 -0.29 8.14 -51.93 -0.42 -0.71 16 29 H 0.09 -0.07 8.09 -51.93 -0.42 -0.49 16 30 H 0.09 -0.11 8.14 -51.93 -0.42 -0.53 16 31 H 0.40 -0.98 7.65 -40.82 -0.31 -1.29 16 32 H 0.17 0.43 7.01 -52.48 -0.37 0.06 16 33 H 0.08 -0.21 7.71 -51.93 -0.40 -0.61 16 34 H 0.39 -2.46 8.74 45.56 0.40 -2.06 16 35 H -0.26 -0.25 7.11 56.52 0.40 0.15 16 36 H -0.25 0.03 7.07 56.52 0.40 0.43 16 37 H 0.16 -0.23 7.52 -52.49 -0.39 -0.62 16 38 H 0.18 -0.36 8.06 -52.49 -0.42 -0.78 16 39 H 0.20 -0.57 7.46 -52.49 -0.39 -0.97 16 40 H 0.09 -0.19 8.14 -51.93 -0.42 -0.61 16 41 H 0.10 -0.08 7.41 -51.93 -0.38 -0.47 16 LS Contribution 357.95 15.07 5.39 5.39 Total: 0.00 -11.91 357.95 -8.38 -20.29 By element: Atomic # 1 Polarization: -5.76 SS G_CDS: -4.82 Total: -10.58 kcal Atomic # 6 Polarization: 2.70 SS G_CDS: -2.50 Total: 0.20 kcal Atomic # 7 Polarization: -1.92 SS G_CDS: 0.06 Total: -1.86 kcal Atomic # 8 Polarization: -5.25 SS G_CDS: -1.08 Total: -6.32 kcal Atomic # 14 Polarization: -1.69 SS G_CDS: -5.43 Total: -7.13 kcal Total LS contribution 5.39 Total: 5.39 kcal Total: -11.91 -8.38 -20.29 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10970304_11618758.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 8.101 kcal (2) G-P(sol) polarization free energy of solvation -11.910 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -3.809 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.381 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.291 kcal (6) G-S(sol) free energy of system = (1) + (5) -12.190 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.98 seconds