Wall clock time and date at job start Sat Mar 6 2021 15:33:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45200 * 1 3 3 C 1.34235 * 116.99486 * 2 1 4 4 O 1.20824 * 120.00091 * 359.97438 * 3 2 1 5 5 C 1.50700 * 119.99763 * 179.97438 * 3 2 1 6 6 H 1.09005 * 112.90552 * 48.74928 * 5 3 2 7 7 C 1.53774 * 113.61660 * 179.97438 * 5 3 2 8 8 C 1.53780 * 87.08176 * 139.98263 * 7 5 3 9 9 H 1.08996 * 113.61497 * 89.12117 * 8 7 5 10 10 N 1.46501 * 113.61339 * 220.01990 * 8 7 5 11 11 C 1.34776 * 119.99951 * 205.00212 * 10 8 7 12 12 O 1.21692 * 120.00039 * 359.97438 * 11 10 8 13 13 C 1.46678 * 120.00259 * 180.02562 * 11 10 8 14 14 C 1.37867 * 126.23769 * 179.97438 * 13 11 10 15 15 C 1.50696 * 126.45480 * 359.92528 * 14 13 11 16 16 C 1.39837 * 107.08879 * 179.97438 * 14 13 11 17 17 C 1.50703 * 126.06818 * 180.02562 * 16 14 13 18 18 O 1.42899 * 109.47126 * 63.83929 * 17 16 14 19 19 Si 1.86302 * 109.46883 * 303.83939 * 17 16 14 20 20 C 1.35455 * 107.86192 * 0.02562 * 16 14 13 21 21 C 1.50699 * 125.56213 * 179.97438 * 20 16 14 22 22 N 1.35532 * 108.87056 * 359.76290 * 20 16 14 23 23 C 1.53779 * 113.61482 * 277.49680 * 5 3 2 24 24 H 1.09009 * 109.46645 * 180.02562 * 1 2 3 25 25 H 1.09001 * 109.47531 * 300.00206 * 1 2 3 26 26 H 1.09002 * 109.47235 * 60.00696 * 1 2 3 27 27 H 1.09002 * 113.61999 * 254.53265 * 7 5 3 28 28 H 1.09007 * 113.60896 * 25.35141 * 7 5 3 29 29 H 0.97001 * 120.00497 * 25.00259 * 10 8 7 30 30 H 1.08998 * 109.47733 * 90.02327 * 15 14 13 31 31 H 1.09001 * 109.47094 * 210.02754 * 15 14 13 32 32 H 1.08999 * 109.47432 * 330.02412 * 15 14 13 33 33 H 1.08999 * 109.46878 * 183.83864 * 17 16 14 34 34 H 0.96702 * 113.99916 * 300.00399 * 18 17 16 35 35 H 1.48498 * 109.99502 * 182.21327 * 19 17 16 36 36 H 1.48499 * 109.99957 * 303.53146 * 19 17 16 37 37 H 1.09000 * 109.47222 * 84.72282 * 21 20 16 38 38 H 1.08996 * 109.47042 * 204.72177 * 21 20 16 39 39 H 1.08998 * 109.47075 * 324.71997 * 21 20 16 40 40 H 0.96999 * 125.67288 * 180.26912 * 22 20 16 41 41 H 1.08996 * 113.61354 * 334.56738 * 23 5 3 42 42 H 1.09003 * 113.61621 * 105.47216 * 23 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1961 0.0000 4 8 1.4032 2.2094 -0.0005 5 6 3.5662 1.2750 0.0006 6 1 4.0249 0.6360 -0.7540 7 6 4.1076 2.7143 -0.0001 8 6 5.1805 2.2276 0.9882 9 1 6.0805 1.8487 0.5040 10 7 5.4691 3.1845 2.0593 11 6 6.6669 3.1637 2.6769 12 8 7.5084 2.3497 2.3452 13 6 6.9557 4.1214 3.7497 14 6 8.1307 4.2141 4.4649 15 6 9.3544 3.3519 4.2922 16 6 7.9725 5.2583 5.3815 17 6 9.0008 5.7272 6.3784 18 8 10.1380 6.2424 5.6831 19 14 9.5242 4.2962 7.4504 20 6 6.7309 5.7734 5.2143 21 6 6.1438 6.9178 5.9995 22 7 6.1046 5.0946 4.2224 23 6 4.1905 1.1240 1.3978 24 1 -0.3633 -1.0278 0.0005 25 1 -0.3634 0.5139 0.8899 26 1 -0.3634 0.5137 -0.8901 27 1 4.5111 3.0287 -0.9627 28 1 3.4163 3.4410 0.4268 29 1 4.7982 3.8332 2.3240 30 1 10.0191 3.8071 3.5581 31 1 9.8736 3.2627 5.2465 32 1 9.0558 2.3620 3.9473 33 1 8.5709 6.5106 7.0025 34 1 10.5719 5.5982 5.1070 35 1 10.4983 4.7569 8.4722 36 1 8.3377 3.6975 8.1131 37 1 6.4495 7.8622 5.5491 38 1 5.0563 6.8456 5.9889 39 1 6.5008 6.8735 7.0284 40 1 5.2057 5.2652 3.9003 41 1 3.5225 1.4155 2.2083 42 1 4.6609 0.1548 1.5635 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10970304_12297754.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:33:55 Heat of formation + Delta-G solvation = -87.585307 kcal Electronic energy + Delta-G solvation = -25557.983314 eV Core-core repulsion = 21699.202605 eV Total energy + Delta-G solvation = -3858.780710 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 309.145 amu Computer time = 0.70 seconds Orbital eigenvalues (eV) -42.70611 -41.95830 -40.55019 -39.03228 -37.67597 -37.37503 -34.83149 -33.74739 -32.87544 -29.54923 -29.30467 -27.92290 -27.01171 -26.81956 -25.99074 -23.06559 -22.07429 -21.15526 -20.78237 -20.08622 -19.27619 -18.97818 -17.99894 -17.60024 -17.45473 -16.84706 -16.64098 -16.48554 -16.14720 -15.75408 -15.32676 -15.16911 -14.81807 -14.48814 -14.35311 -14.31596 -14.04084 -13.95431 -13.78767 -13.71426 -13.60821 -13.29108 -13.20051 -13.09508 -12.69845 -12.61870 -12.43844 -12.29073 -11.94908 -11.86783 -11.84969 -11.43503 -10.95258 -10.48267 -10.25873 -9.55245 -8.99721 -4.83482 0.37574 1.07979 1.27050 1.56404 1.60782 1.83413 1.92966 2.06569 2.13476 2.31088 3.08585 3.16919 3.49479 3.59914 3.64310 3.71262 3.73412 3.90773 3.99191 4.01601 4.10355 4.17791 4.29130 4.33206 4.38249 4.39663 4.44902 4.46345 4.52897 4.54165 4.64270 4.72577 4.77814 4.88766 4.91699 4.97656 5.11547 5.27645 5.32337 5.37545 5.67975 5.89026 6.23192 6.39884 6.65776 6.70463 7.09168 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.356 6.356 3 C 0.472 3.528 4 O -0.506 6.506 5 C -0.109 4.109 6 H 0.133 0.867 7 C -0.128 4.128 8 C 0.129 3.871 9 H 0.129 0.871 10 N -0.723 5.723 11 C 0.594 3.406 12 O -0.520 6.520 13 C -0.062 4.062 14 C -0.058 4.058 15 C -0.095 4.095 16 C -0.208 4.208 17 C -0.028 4.028 18 O -0.541 6.541 19 Si 0.669 3.331 20 C 0.079 3.921 21 C -0.096 4.096 22 N -0.537 5.537 23 C -0.134 4.134 24 H 0.104 0.896 25 H 0.063 0.937 26 H 0.064 0.936 27 H 0.090 0.910 28 H 0.101 0.899 29 H 0.395 0.605 30 H 0.079 0.921 31 H 0.067 0.933 32 H 0.091 0.909 33 H 0.108 0.892 34 H 0.376 0.624 35 H -0.253 1.253 36 H -0.257 1.257 37 H 0.083 0.917 38 H 0.069 0.931 39 H 0.084 0.916 40 H 0.415 0.585 41 H 0.090 0.910 42 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.466 -1.095 -0.916 2.849 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.272 6.272 3 C 0.315 3.685 4 O -0.394 6.394 5 C -0.128 4.128 6 H 0.151 0.849 7 C -0.166 4.166 8 C 0.024 3.976 9 H 0.146 0.854 10 N -0.374 5.374 11 C 0.383 3.617 12 O -0.396 6.396 13 C -0.173 4.173 14 C -0.066 4.066 15 C -0.151 4.151 16 C -0.214 4.214 17 C -0.140 4.140 18 O -0.347 6.347 19 Si 0.570 3.430 20 C -0.039 4.039 21 C -0.154 4.154 22 N -0.134 5.134 23 C -0.173 4.173 24 H 0.122 0.878 25 H 0.082 0.918 26 H 0.083 0.917 27 H 0.109 0.891 28 H 0.119 0.881 29 H 0.229 0.771 30 H 0.097 0.903 31 H 0.085 0.915 32 H 0.110 0.890 33 H 0.126 0.874 34 H 0.223 0.777 35 H -0.178 1.178 36 H -0.182 1.182 37 H 0.101 0.899 38 H 0.088 0.912 39 H 0.103 0.897 40 H 0.253 0.747 41 H 0.108 0.892 42 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges -2.363 -1.215 -0.107 2.659 hybrid contribution -1.826 0.949 -0.237 2.072 sum -4.189 -0.266 -0.345 4.211 Atomic orbital electron populations 1.23333 0.75879 1.04086 1.02687 1.86525 1.23759 1.33212 1.83713 1.23476 0.91581 0.81440 0.72013 1.90680 1.67005 1.36468 1.45207 1.22310 0.87719 1.00952 1.01863 0.84893 1.23388 0.97130 0.94969 1.01084 1.22457 0.97973 0.89350 0.87835 0.85371 1.45823 1.16216 1.37245 1.38110 1.17019 0.81745 0.82575 0.80361 1.90834 1.46238 1.38321 1.64186 1.19997 0.93539 0.98828 1.04938 1.19722 0.94579 0.96798 0.95531 1.20517 0.93581 1.00260 1.00757 1.19522 0.96158 1.01406 1.04320 1.24263 0.86247 1.05975 0.97468 1.86485 1.42697 1.41997 1.63494 0.94601 0.83760 0.83243 0.81377 1.20304 0.93466 0.97148 0.92966 1.20496 1.00710 0.94581 0.99566 1.41832 1.15091 1.27187 1.29263 1.23467 0.97945 1.01356 0.94527 0.87772 0.91809 0.91686 0.89139 0.88065 0.77060 0.90288 0.91454 0.89048 0.87423 0.77711 1.17764 1.18179 0.89862 0.91159 0.89732 0.74729 0.89177 0.88943 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 101.05 1.07 1.03 16 2 O -0.36 -0.32 10.57 -39.27 -0.41 -0.73 16 3 C 0.47 0.48 7.48 36.01 0.27 0.75 16 4 O -0.51 -1.86 15.65 -18.75 -0.29 -2.16 16 5 C -0.11 0.21 4.26 -90.96 -0.39 -0.18 16 6 H 0.13 -0.48 8.14 -51.93 -0.42 -0.90 16 7 C -0.13 0.30 7.16 -25.92 -0.19 0.11 16 8 C 0.13 -0.24 4.24 -67.10 -0.28 -0.52 16 9 H 0.13 -0.14 7.46 -51.93 -0.39 -0.53 16 10 N -0.72 1.10 5.35 -54.31 -0.29 0.80 16 11 C 0.59 0.79 7.79 -12.85 -0.10 0.69 16 12 O -0.52 -2.12 14.40 5.20 0.07 -2.05 16 13 C -0.06 -0.06 7.06 -81.98 -0.58 -0.64 16 14 C -0.06 -0.07 5.81 -104.16 -0.61 -0.68 16 15 C -0.10 0.03 8.53 36.00 0.31 0.34 16 16 C -0.21 -0.22 4.63 -105.02 -0.49 -0.71 16 17 C -0.03 -0.02 2.87 36.01 0.10 0.08 16 18 O -0.54 -0.81 12.88 -35.23 -0.45 -1.26 16 19 Si 0.67 0.38 29.43 -169.99 -5.00 -4.63 16 20 C 0.08 -0.01 7.13 -81.95 -0.58 -0.59 16 21 C -0.10 0.22 9.96 36.01 0.36 0.58 16 22 N -0.54 0.63 5.99 -5.70 -0.03 0.60 16 23 C -0.13 0.28 7.43 -25.90 -0.19 0.08 16 24 H 0.10 -0.34 8.14 -51.92 -0.42 -0.76 16 25 H 0.06 -0.06 8.13 -51.93 -0.42 -0.48 16 26 H 0.06 -0.06 8.13 -51.93 -0.42 -0.48 16 27 H 0.09 -0.27 8.14 -51.93 -0.42 -0.69 16 28 H 0.10 -0.17 7.41 -51.93 -0.38 -0.55 16 29 H 0.40 -1.46 7.86 -40.82 -0.32 -1.78 16 30 H 0.08 -0.09 8.14 -51.93 -0.42 -0.52 16 31 H 0.07 -0.16 4.46 -51.93 -0.23 -0.39 16 32 H 0.09 0.10 6.49 -51.93 -0.34 -0.24 16 33 H 0.11 0.05 6.66 -51.93 -0.35 -0.30 16 34 H 0.38 -0.62 7.69 45.56 0.35 -0.27 16 35 H -0.25 -0.81 7.11 56.52 0.40 -0.41 16 36 H -0.26 -0.84 7.11 56.52 0.40 -0.44 16 37 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 38 H 0.07 -0.26 8.14 -51.93 -0.42 -0.69 16 39 H 0.08 -0.22 7.28 -51.93 -0.38 -0.59 16 40 H 0.42 -1.74 8.19 -40.82 -0.33 -2.07 16 41 H 0.09 -0.15 8.09 -51.93 -0.42 -0.57 16 42 H 0.09 -0.20 8.14 -51.93 -0.42 -0.62 16 LS Contribution 348.24 15.07 5.25 5.25 Total: 0.00 -9.48 348.24 -8.26 -17.74 By element: Atomic # 1 Polarization: -8.12 SS G_CDS: -5.79 Total: -13.91 kcal Atomic # 6 Polarization: 1.65 SS G_CDS: -1.30 Total: 0.36 kcal Atomic # 7 Polarization: 1.73 SS G_CDS: -0.32 Total: 1.40 kcal Atomic # 8 Polarization: -5.12 SS G_CDS: -1.09 Total: -6.20 kcal Atomic # 14 Polarization: 0.38 SS G_CDS: -5.00 Total: -4.63 kcal Total LS contribution 5.25 Total: 5.25 kcal Total: -9.48 -8.26 -17.74 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10970304_12297754.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -69.848 kcal (2) G-P(sol) polarization free energy of solvation -9.482 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -79.330 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.256 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.738 kcal (6) G-S(sol) free energy of system = (1) + (5) -87.585 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.70 seconds