Wall clock time and date at job start Sat Mar 6 2021 15:33:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45200 * 1 3 3 C 1.34235 * 116.99486 * 2 1 4 4 O 1.20824 * 120.00091 * 359.97438 * 3 2 1 5 5 C 1.50700 * 119.99763 * 179.97438 * 3 2 1 6 6 H 1.09005 * 112.90552 * 48.74928 * 5 3 2 7 7 C 1.53774 * 113.61660 * 179.97438 * 5 3 2 8 8 C 1.53780 * 87.08176 * 139.98263 * 7 5 3 9 9 H 1.08996 * 113.61497 * 89.12117 * 8 7 5 10 10 N 1.46501 * 113.61339 * 220.01990 * 8 7 5 11 11 C 1.34776 * 119.99951 * 205.00212 * 10 8 7 12 12 O 1.21692 * 120.00039 * 359.97438 * 11 10 8 13 13 C 1.46678 * 120.00259 * 180.02562 * 11 10 8 14 14 C 1.37867 * 126.23769 * 179.97438 * 13 11 10 15 15 C 1.50696 * 126.45480 * 359.92528 * 14 13 11 16 16 C 1.39837 * 107.08879 * 179.97438 * 14 13 11 17 17 C 1.50703 * 126.06818 * 180.02562 * 16 14 13 18 18 O 1.42899 * 109.47126 * 63.83929 * 17 16 14 19 19 Si 1.86302 * 109.46883 * 303.83939 * 17 16 14 20 20 C 1.35455 * 107.86192 * 0.02562 * 16 14 13 21 21 C 1.50699 * 125.56213 * 179.97438 * 20 16 14 22 22 N 1.35532 * 108.87056 * 359.76290 * 20 16 14 23 23 C 1.53779 * 113.61482 * 277.49680 * 5 3 2 24 24 H 1.09009 * 109.46645 * 180.02562 * 1 2 3 25 25 H 1.09001 * 109.47531 * 300.00206 * 1 2 3 26 26 H 1.09002 * 109.47235 * 60.00696 * 1 2 3 27 27 H 1.09002 * 113.61999 * 254.53265 * 7 5 3 28 28 H 1.09007 * 113.60896 * 25.35141 * 7 5 3 29 29 H 0.97001 * 120.00497 * 25.00259 * 10 8 7 30 30 H 1.08998 * 109.47733 * 90.02327 * 15 14 13 31 31 H 1.09001 * 109.47094 * 210.02754 * 15 14 13 32 32 H 1.08999 * 109.47432 * 330.02412 * 15 14 13 33 33 H 1.08999 * 109.46878 * 183.83864 * 17 16 14 34 34 H 0.96702 * 113.99916 * 300.00399 * 18 17 16 35 35 H 1.48498 * 109.99502 * 182.21327 * 19 17 16 36 36 H 1.48499 * 109.99957 * 303.53146 * 19 17 16 37 37 H 1.09000 * 109.47222 * 84.72282 * 21 20 16 38 38 H 1.08996 * 109.47042 * 204.72177 * 21 20 16 39 39 H 1.08998 * 109.47075 * 324.71997 * 21 20 16 40 40 H 0.96999 * 125.67288 * 180.26912 * 22 20 16 41 41 H 1.08996 * 113.61354 * 334.56738 * 23 5 3 42 42 H 1.09003 * 113.61621 * 105.47216 * 23 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1961 0.0000 4 8 1.4032 2.2094 -0.0005 5 6 3.5662 1.2750 0.0006 6 1 4.0249 0.6360 -0.7540 7 6 4.1076 2.7143 -0.0001 8 6 5.1805 2.2276 0.9882 9 1 6.0805 1.8487 0.5040 10 7 5.4691 3.1845 2.0593 11 6 6.6669 3.1637 2.6769 12 8 7.5084 2.3497 2.3452 13 6 6.9557 4.1214 3.7497 14 6 8.1307 4.2141 4.4649 15 6 9.3544 3.3519 4.2922 16 6 7.9725 5.2583 5.3815 17 6 9.0008 5.7272 6.3784 18 8 10.1380 6.2424 5.6831 19 14 9.5242 4.2962 7.4504 20 6 6.7309 5.7734 5.2143 21 6 6.1438 6.9178 5.9995 22 7 6.1046 5.0946 4.2224 23 6 4.1905 1.1240 1.3978 24 1 -0.3633 -1.0278 0.0005 25 1 -0.3634 0.5139 0.8899 26 1 -0.3634 0.5137 -0.8901 27 1 4.5111 3.0287 -0.9627 28 1 3.4163 3.4410 0.4268 29 1 4.7982 3.8332 2.3240 30 1 10.0191 3.8071 3.5581 31 1 9.8736 3.2627 5.2465 32 1 9.0558 2.3620 3.9473 33 1 8.5709 6.5106 7.0025 34 1 10.5719 5.5982 5.1070 35 1 10.4983 4.7569 8.4722 36 1 8.3377 3.6975 8.1131 37 1 6.4495 7.8622 5.5491 38 1 5.0563 6.8456 5.9889 39 1 6.5008 6.8735 7.0284 40 1 5.2057 5.2652 3.9003 41 1 3.5225 1.4155 2.2083 42 1 4.6609 0.1548 1.5635 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10970304_12297754.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:33:54 Heat of formation + Delta-G solvation = -88.654310 kcal Electronic energy + Delta-G solvation = -25558.029670 eV Core-core repulsion = 21699.202605 eV Total energy + Delta-G solvation = -3858.827065 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 309.145 amu Computer time = 0.81 seconds Orbital eigenvalues (eV) -42.68333 -41.96280 -40.56532 -39.03237 -37.72824 -37.46473 -34.82849 -33.71630 -32.81950 -29.49826 -29.23416 -27.87525 -26.85914 -26.79576 -25.97233 -23.05139 -22.05610 -21.10569 -20.76614 -20.06469 -19.22863 -18.98169 -18.02672 -17.64459 -17.47149 -16.81884 -16.63545 -16.46827 -16.07226 -15.77273 -15.30885 -15.20103 -14.83271 -14.47986 -14.33691 -14.29479 -14.04494 -13.96355 -13.66628 -13.62229 -13.53963 -13.18164 -13.12067 -13.02802 -12.65349 -12.51912 -12.41795 -12.33006 -12.01800 -11.88352 -11.83497 -11.45809 -11.03301 -10.54157 -10.22747 -9.55484 -8.99124 -4.92081 0.36095 1.02773 1.22909 1.53859 1.62001 1.74148 1.95434 2.03850 2.16140 2.26672 3.21293 3.30007 3.63088 3.67662 3.71868 3.78018 3.83901 4.00618 4.01296 4.12972 4.22970 4.25629 4.34074 4.46399 4.49344 4.53973 4.58717 4.59392 4.65986 4.67707 4.80610 4.90191 4.93585 4.95581 5.02384 5.04130 5.17652 5.29938 5.34509 5.43439 5.69961 5.89394 6.33680 6.50556 6.61442 6.78940 7.07938 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.363 6.363 3 C 0.471 3.529 4 O -0.538 6.538 5 C -0.105 4.105 6 H 0.153 0.847 7 C -0.120 4.120 8 C 0.129 3.871 9 H 0.123 0.877 10 N -0.712 5.712 11 C 0.593 3.407 12 O -0.553 6.553 13 C -0.078 4.078 14 C -0.071 4.071 15 C -0.095 4.095 16 C -0.227 4.227 17 C -0.027 4.027 18 O -0.556 6.556 19 Si 0.735 3.265 20 C 0.079 3.921 21 C -0.097 4.097 22 N -0.524 5.524 23 C -0.129 4.129 24 H 0.127 0.873 25 H 0.061 0.939 26 H 0.062 0.938 27 H 0.100 0.900 28 H 0.096 0.904 29 H 0.407 0.593 30 H 0.087 0.913 31 H 0.085 0.915 32 H 0.076 0.924 33 H 0.111 0.889 34 H 0.388 0.612 35 H -0.289 1.289 36 H -0.294 1.294 37 H 0.087 0.913 38 H 0.087 0.913 39 H 0.086 0.914 40 H 0.429 0.571 41 H 0.086 0.914 42 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.891 -0.866 -1.283 3.279 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.279 6.279 3 C 0.316 3.684 4 O -0.428 6.428 5 C -0.124 4.124 6 H 0.171 0.829 7 C -0.158 4.158 8 C 0.024 3.976 9 H 0.141 0.859 10 N -0.362 5.362 11 C 0.382 3.618 12 O -0.432 6.432 13 C -0.190 4.190 14 C -0.080 4.080 15 C -0.151 4.151 16 C -0.234 4.234 17 C -0.138 4.138 18 O -0.363 6.363 19 Si 0.641 3.359 20 C -0.040 4.040 21 C -0.154 4.154 22 N -0.123 5.123 23 C -0.168 4.168 24 H 0.145 0.855 25 H 0.079 0.921 26 H 0.080 0.920 27 H 0.118 0.882 28 H 0.114 0.886 29 H 0.242 0.758 30 H 0.105 0.895 31 H 0.102 0.898 32 H 0.094 0.906 33 H 0.129 0.871 34 H 0.237 0.763 35 H -0.217 1.217 36 H -0.221 1.221 37 H 0.106 0.894 38 H 0.106 0.894 39 H 0.105 0.895 40 H 0.269 0.731 41 H 0.105 0.895 42 H 0.114 0.886 Dipole moment (debyes) X Y Z Total from point charges -2.825 -0.990 -0.510 3.036 hybrid contribution -1.752 0.871 -0.091 1.959 sum -4.577 -0.119 -0.601 4.618 Atomic orbital electron populations 1.23525 0.75060 1.05592 1.02438 1.86528 1.24744 1.33214 1.83443 1.24010 0.92541 0.80991 0.70908 1.90663 1.67902 1.37369 1.46818 1.22439 0.85879 1.01654 1.02471 0.82909 1.23339 0.96539 0.94657 1.01302 1.22450 0.97868 0.89441 0.87820 0.85895 1.45736 1.15648 1.37243 1.37604 1.17109 0.82026 0.82251 0.80402 1.90813 1.47389 1.39669 1.65302 1.20020 0.94115 0.99523 1.05301 1.20000 0.95204 0.97097 0.95667 1.20538 0.93491 0.99259 1.01800 1.19612 0.96875 1.02030 1.04851 1.24263 0.86224 1.05836 0.97497 1.86447 1.42986 1.43007 1.63870 0.93808 0.80453 0.81879 0.79712 1.20690 0.93288 0.97268 0.92781 1.20590 1.01796 0.93746 0.99285 1.41789 1.15487 1.26303 1.28684 1.23430 0.97623 1.01406 0.94364 0.85455 0.92066 0.91968 0.88182 0.88601 0.75755 0.89491 0.89754 0.90556 0.87123 0.76273 1.21659 1.22070 0.89404 0.89398 0.89501 0.73107 0.89507 0.88631 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.05 10.56 113.37 1.20 1.14 16 2 O -0.36 -0.64 10.57 -51.47 -0.54 -1.18 16 3 C 0.47 1.02 7.48 71.24 0.53 1.56 16 4 O -0.54 -4.25 15.65 21.97 0.34 -3.91 16 5 C -0.11 0.44 4.26 -11.02 -0.05 0.39 16 6 H 0.15 -1.25 8.14 -2.38 -0.02 -1.27 16 7 C -0.12 0.61 7.16 31.12 0.22 0.83 16 8 C 0.13 -0.49 4.24 45.53 0.19 -0.30 16 9 H 0.12 -0.26 7.46 -2.39 -0.02 -0.28 16 10 N -0.71 2.15 5.35 -443.95 -2.38 -0.22 16 11 C 0.59 1.86 7.79 86.45 0.67 2.54 16 12 O -0.55 -5.06 14.40 -4.32 -0.06 -5.12 16 13 C -0.08 -0.17 7.06 40.35 0.28 0.12 16 14 C -0.07 -0.21 5.81 -19.57 -0.11 -0.32 16 15 C -0.10 0.01 8.53 71.23 0.61 0.61 16 16 C -0.23 -0.48 4.63 -20.12 -0.09 -0.58 16 17 C -0.03 -0.04 2.87 71.24 0.20 0.16 16 18 O -0.56 -1.58 12.88 -148.98 -1.92 -3.50 16 19 Si 0.73 1.35 29.43 68.60 2.02 3.37 16 20 C 0.08 -0.05 7.13 41.34 0.29 0.24 16 21 C -0.10 0.55 9.96 71.24 0.71 1.26 16 22 N -0.52 1.46 5.99 -171.93 -1.03 0.43 16 23 C -0.13 0.55 7.43 31.13 0.23 0.78 16 24 H 0.13 -0.91 8.14 -2.38 -0.02 -0.93 16 25 H 0.06 -0.09 8.13 -2.39 -0.02 -0.11 16 26 H 0.06 -0.09 8.13 -2.39 -0.02 -0.11 16 27 H 0.10 -0.67 8.14 -2.39 -0.02 -0.69 16 28 H 0.10 -0.33 7.41 -2.38 -0.02 -0.35 16 29 H 0.41 -3.13 7.86 -92.71 -0.73 -3.86 16 30 H 0.09 -0.17 8.14 -2.39 -0.02 -0.19 16 31 H 0.08 -0.38 4.46 -2.39 -0.01 -0.39 16 32 H 0.08 0.26 6.49 -2.39 -0.02 0.25 16 33 H 0.11 0.09 6.66 -2.39 -0.02 0.07 16 34 H 0.39 -1.36 7.69 -74.06 -0.57 -1.93 16 35 H -0.29 -2.24 7.11 99.48 0.71 -1.54 16 36 H -0.29 -2.31 7.11 99.48 0.71 -1.60 16 37 H 0.09 -0.54 8.14 -2.39 -0.02 -0.56 16 38 H 0.09 -0.80 8.14 -2.39 -0.02 -0.82 16 39 H 0.09 -0.51 7.28 -2.39 -0.02 -0.53 16 40 H 0.43 -3.94 8.19 -92.71 -0.76 -4.70 16 41 H 0.09 -0.29 8.09 -2.39 -0.02 -0.31 16 42 H 0.10 -0.44 8.14 -2.39 -0.02 -0.46 16 Total: 0.00 -22.40 348.24 0.40 -22.01 By element: Atomic # 1 Polarization: -19.38 SS G_CDS: -0.93 Total: -20.31 kcal Atomic # 6 Polarization: 3.54 SS G_CDS: 4.90 Total: 8.44 kcal Atomic # 7 Polarization: 3.61 SS G_CDS: -3.41 Total: 0.21 kcal Atomic # 8 Polarization: -11.53 SS G_CDS: -2.18 Total: -13.71 kcal Atomic # 14 Polarization: 1.35 SS G_CDS: 2.02 Total: 3.37 kcal Total: -22.40 0.40 -22.01 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10970304_12297754.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -66.646 kcal (2) G-P(sol) polarization free energy of solvation -22.404 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -89.050 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.396 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.008 kcal (6) G-S(sol) free energy of system = (1) + (5) -88.654 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.81 seconds