Wall clock time and date at job start Sat Mar 6 2021 15:33:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45203 * 1 3 3 C 1.34235 * 116.99498 * 2 1 4 4 O 1.20826 * 120.00016 * 359.97438 * 3 2 1 5 5 C 1.50700 * 119.99873 * 180.02562 * 3 2 1 6 6 H 1.08999 * 112.84858 * 48.79694 * 5 3 2 7 7 C 1.53778 * 113.61736 * 179.97438 * 5 3 2 8 8 C 1.53781 * 87.08147 * 139.97770 * 7 5 3 9 9 H 1.09002 * 113.61226 * 89.20527 * 8 7 5 10 10 N 1.46496 * 113.61253 * 220.01771 * 8 7 5 11 11 C 1.34782 * 120.00238 * 205.00381 * 10 8 7 12 12 O 1.21619 * 119.99274 * 0.02562 * 11 10 8 13 13 C 1.47296 * 120.00459 * 180.02562 * 11 10 8 14 14 C 1.39824 * 120.13378 * 359.97438 * 13 11 10 15 15 C 1.37583 * 119.96181 * 179.97438 * 14 13 11 16 16 C 1.50705 * 119.87603 * 180.02562 * 15 14 13 17 17 O 1.42894 * 109.47163 * 255.01737 * 16 15 14 18 18 Si 1.86294 * 109.47227 * 15.02009 * 16 15 14 19 19 C 1.39137 * 120.24616 * 0.05682 * 15 14 13 20 20 O 1.35709 * 119.86725 * 180.02562 * 19 15 14 21 21 C 1.42907 * 116.99966 * 179.97438 * 20 19 15 22 22 C 1.38730 * 120.27005 * 359.97438 * 19 15 14 23 23 C 1.38405 * 120.03338 * 359.97438 * 22 19 15 24 24 O 1.35655 * 120.12046 * 179.74731 * 23 22 19 25 25 C 1.42905 * 117.00208 * 0.02562 * 24 23 22 26 26 C 1.53779 * 113.61125 * 277.49615 * 5 3 2 27 27 H 1.08991 * 109.47210 * 60.00484 * 1 2 3 28 28 H 1.09002 * 109.46476 * 180.02562 * 1 2 3 29 29 H 1.09005 * 109.47327 * 300.00014 * 1 2 3 30 30 H 1.09005 * 113.61290 * 25.42814 * 7 5 3 31 31 H 1.08993 * 113.61501 * 254.53149 * 7 5 3 32 32 H 0.97004 * 120.00341 * 25.00541 * 10 8 7 33 33 H 1.07999 * 120.01763 * 0.02562 * 14 13 11 34 34 H 1.09002 * 109.46966 * 135.01603 * 16 15 14 35 35 H 0.96703 * 113.99773 * 60.00022 * 17 16 15 36 36 H 1.48500 * 110.00401 * 58.68120 * 18 16 15 37 37 H 1.48504 * 110.00113 * 179.97438 * 18 16 15 38 38 H 1.08994 * 109.47259 * 59.99763 * 21 20 19 39 39 H 1.09000 * 109.46917 * 180.02562 * 21 20 19 40 40 H 1.08994 * 109.46785 * 299.99473 * 21 20 19 41 41 H 1.07998 * 119.98431 * 179.97438 * 22 19 15 42 42 H 1.08999 * 109.46457 * 299.99869 * 25 24 23 43 43 H 1.08998 * 109.47183 * 59.99510 * 25 24 23 44 44 H 1.08995 * 109.47015 * 180.02562 * 25 24 23 45 45 H 1.08998 * 113.61910 * 105.46986 * 26 5 3 46 46 H 1.08999 * 113.61784 * 334.56508 * 26 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1961 0.0000 4 8 1.4032 2.2094 -0.0005 5 6 3.5663 1.2751 -0.0006 6 1 4.0233 0.6366 -0.7566 7 6 4.1077 2.7144 -0.0011 8 6 5.1813 2.2273 0.9862 9 1 6.0815 1.8499 0.5012 10 7 5.4706 3.1838 2.0574 11 6 6.6689 3.1628 2.6742 12 8 7.5100 2.3500 2.3411 13 6 6.9597 4.1242 3.7516 14 6 5.9949 5.0602 4.1364 15 6 6.2701 5.9562 5.1436 16 6 5.2285 6.9639 5.5572 17 8 5.5843 8.2518 5.0509 18 14 3.5715 6.4622 4.8695 19 6 7.5066 5.9359 5.7812 20 8 7.7696 6.8229 6.7741 21 6 9.0583 6.7472 7.3870 22 6 8.4713 5.0119 5.4069 23 6 8.2062 4.1046 4.3959 24 8 9.1501 3.2037 4.0250 25 6 10.3973 3.2468 4.7212 26 6 4.1915 1.1235 1.3961 27 1 -0.3633 0.5137 -0.8900 28 1 -0.3632 -1.0277 0.0005 29 1 -0.3634 0.5138 0.8900 30 1 3.4173 3.4407 0.4278 31 1 4.5103 3.0290 -0.9638 32 1 4.7999 3.8323 2.3229 33 1 5.0339 5.0793 3.6439 34 1 5.1734 7.0037 6.6451 35 1 5.6519 8.2906 4.0870 36 1 3.2045 5.1107 5.3634 37 1 2.5355 7.4476 5.2709 38 1 9.8290 6.9131 6.6343 39 1 9.1372 7.5092 8.1624 40 1 9.1915 5.7613 7.8323 41 1 9.4297 5.0005 5.9047 42 1 10.8565 4.2256 4.5835 43 1 10.2266 3.0717 5.7835 44 1 11.0600 2.4762 4.3274 45 1 4.6620 0.1542 1.5611 46 1 3.5242 1.4147 2.2073 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10970304_12297780.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:33:56 Heat of formation + Delta-G solvation = -160.342391 kcal Electronic energy + Delta-G solvation = -31763.865045 eV Core-core repulsion = 27201.764738 eV Total energy + Delta-G solvation = -4562.100307 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 352.149 amu Computer time = 1.15 seconds Orbital eigenvalues (eV) -42.16409 -41.82623 -40.66327 -39.99836 -38.97974 -38.42264 -37.37420 -36.97274 -34.55116 -32.24039 -31.72365 -29.33676 -28.98553 -28.21465 -26.83585 -26.74710 -26.10430 -24.60819 -23.05677 -22.17125 -21.56271 -20.68387 -19.97866 -18.93556 -18.78163 -18.11560 -17.94040 -17.80604 -17.38101 -17.22327 -16.90774 -16.59729 -16.35890 -16.15228 -16.04156 -15.78871 -15.68851 -15.59945 -15.33859 -14.79786 -14.39930 -14.22272 -14.20719 -13.98866 -13.66178 -13.50537 -13.38694 -13.23558 -12.96096 -12.67491 -12.54580 -12.51982 -12.44710 -12.28271 -12.23841 -11.99880 -11.81173 -11.73025 -11.64726 -11.36249 -10.87772 -10.40015 -10.08207 -9.91507 -9.19256 -5.07387 -0.26222 0.08065 1.11309 1.28417 1.61292 1.70700 1.74924 1.97281 2.11384 2.16527 2.23939 2.60632 3.31743 3.39906 3.44455 3.52527 3.63313 3.74198 3.75208 3.81258 3.86054 4.07581 4.12431 4.17823 4.23606 4.26472 4.27719 4.28571 4.29568 4.31418 4.47016 4.58494 4.64278 4.66095 4.66937 4.70842 4.72056 4.75468 4.88559 4.92588 5.01314 5.01460 5.17570 5.29715 5.37965 5.56687 6.03045 6.28805 6.55729 6.69705 6.83804 7.26586 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.365 6.365 3 C 0.471 3.529 4 O -0.534 6.534 5 C -0.106 4.106 6 H 0.150 0.850 7 C -0.118 4.118 8 C 0.127 3.873 9 H 0.117 0.883 10 N -0.709 5.709 11 C 0.567 3.433 12 O -0.560 6.560 13 C -0.226 4.226 14 C 0.009 3.991 15 C -0.205 4.205 16 C -0.057 4.057 17 O -0.553 6.553 18 Si 0.767 3.233 19 C 0.213 3.787 20 O -0.315 6.315 21 C 0.012 3.988 22 C -0.311 4.311 23 C 0.219 3.781 24 O -0.302 6.302 25 C 0.010 3.990 26 C -0.133 4.133 27 H 0.062 0.938 28 H 0.125 0.875 29 H 0.061 0.939 30 H 0.104 0.896 31 H 0.102 0.898 32 H 0.412 0.588 33 H 0.166 0.834 34 H 0.099 0.901 35 H 0.393 0.607 36 H -0.276 1.276 37 H -0.296 1.296 38 H 0.070 0.930 39 H 0.118 0.882 40 H 0.069 0.931 41 H 0.162 0.838 42 H 0.071 0.929 43 H 0.069 0.931 44 H 0.114 0.886 45 H 0.090 0.910 46 H 0.090 0.910 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.408 -0.207 -0.466 1.498 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.281 6.281 3 C 0.315 3.685 4 O -0.423 6.423 5 C -0.125 4.125 6 H 0.168 0.832 7 C -0.156 4.156 8 C 0.022 3.978 9 H 0.135 0.865 10 N -0.362 5.362 11 C 0.356 3.644 12 O -0.439 6.439 13 C -0.230 4.230 14 C -0.009 4.009 15 C -0.206 4.206 16 C -0.166 4.166 17 O -0.361 6.361 18 Si 0.671 3.329 19 C 0.164 3.836 20 O -0.226 6.226 21 C -0.082 4.082 22 C -0.331 4.331 23 C 0.169 3.831 24 O -0.212 6.212 25 C -0.084 4.084 26 C -0.172 4.172 27 H 0.081 0.919 28 H 0.143 0.857 29 H 0.080 0.920 30 H 0.122 0.878 31 H 0.120 0.880 32 H 0.250 0.750 33 H 0.183 0.817 34 H 0.116 0.884 35 H 0.243 0.757 36 H -0.202 1.202 37 H -0.223 1.223 38 H 0.088 0.912 39 H 0.136 0.864 40 H 0.087 0.913 41 H 0.180 0.820 42 H 0.090 0.910 43 H 0.088 0.912 44 H 0.132 0.868 45 H 0.108 0.892 46 H 0.108 0.892 Dipole moment (debyes) X Y Z Total from point charges 0.866 -0.585 0.051 1.047 hybrid contribution 0.277 0.279 1.080 1.149 sum 1.143 -0.306 1.131 1.637 Atomic orbital electron populations 1.23510 0.75147 1.05468 1.02480 1.86528 1.24684 1.33390 1.83531 1.24001 0.92505 0.80986 0.70994 1.90661 1.67815 1.37217 1.46625 1.22435 0.85867 1.01990 1.02231 0.83218 1.23366 0.96423 0.94531 1.01288 1.22412 0.97687 0.89596 0.88062 0.86505 1.45750 1.15681 1.37317 1.37431 1.17999 0.82029 0.82955 0.81402 1.90820 1.47449 1.40021 1.65594 1.19160 0.94808 1.04452 1.04617 1.20849 0.97421 0.90030 0.92596 1.19592 0.95620 1.03448 1.01953 1.24980 1.05081 0.84460 1.02096 1.86506 1.92868 1.28451 1.28251 0.94349 0.72391 0.76796 0.89358 1.18943 0.92455 0.86246 0.85913 1.86143 1.37194 1.52526 1.46755 1.23459 0.81717 1.04472 0.98524 1.21418 1.03439 1.02443 1.05774 1.18971 0.88027 0.86334 0.89748 1.86362 1.24247 1.51675 1.58963 1.23470 0.82678 1.04502 0.97748 1.23458 0.97810 1.01276 0.94625 0.91909 0.85657 0.92037 0.87759 0.87967 0.75041 0.81721 0.88373 0.75719 1.20210 1.22319 0.91159 0.86398 0.91258 0.82022 0.91047 0.91214 0.86777 0.89180 0.89185 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 10.56 113.37 1.20 1.16 16 2 O -0.37 -0.85 10.57 -51.46 -0.54 -1.39 16 3 C 0.47 1.18 7.48 71.24 0.53 1.71 16 4 O -0.53 -4.11 15.65 21.96 0.34 -3.76 16 5 C -0.11 0.37 4.26 -11.02 -0.05 0.32 16 6 H 0.15 -1.08 8.14 -2.39 -0.02 -1.10 16 7 C -0.12 0.58 7.16 31.12 0.22 0.81 16 8 C 0.13 -0.31 4.24 45.53 0.19 -0.11 16 9 H 0.12 0.00 7.46 -2.39 -0.02 -0.02 16 10 N -0.71 0.99 5.30 -443.36 -2.35 -1.36 16 11 C 0.57 3.34 7.76 86.62 0.67 4.01 16 12 O -0.56 -7.78 14.75 16.87 0.25 -7.53 16 13 C -0.23 -0.89 5.89 -20.00 -0.12 -1.00 16 14 C 0.01 -0.01 8.14 22.50 0.18 0.17 16 15 C -0.20 -0.21 5.27 -19.80 -0.10 -0.31 16 16 C -0.06 -0.03 2.37 71.24 0.17 0.13 16 17 O -0.55 -0.75 12.88 -148.98 -1.92 -2.67 16 18 Si 0.77 -2.08 29.91 68.60 2.05 -0.02 16 19 C 0.21 0.60 6.67 22.60 0.15 0.75 16 20 O -0.31 -0.94 9.80 -90.30 -0.88 -1.82 16 21 C 0.01 -0.06 9.80 113.37 1.11 1.06 16 22 C -0.31 -0.48 8.01 22.43 0.18 -0.30 16 23 C 0.22 1.16 6.70 22.82 0.15 1.32 16 24 O -0.30 -2.20 8.56 -68.74 -0.59 -2.79 16 25 C 0.01 -0.02 9.81 113.37 1.11 1.09 16 26 C -0.13 0.38 7.43 31.13 0.23 0.61 16 27 H 0.06 -0.07 8.13 -2.39 -0.02 -0.09 16 28 H 0.13 -0.82 8.14 -2.39 -0.02 -0.84 16 29 H 0.06 -0.07 8.13 -2.38 -0.02 -0.09 16 30 H 0.10 -0.47 7.41 -2.38 -0.02 -0.49 16 31 H 0.10 -0.71 8.14 -2.39 -0.02 -0.73 16 32 H 0.41 -2.95 6.75 -92.71 -0.63 -3.57 16 33 H 0.17 -1.37 3.43 -2.91 -0.01 -1.38 16 34 H 0.10 0.35 7.82 -2.39 -0.02 0.33 16 35 H 0.39 -2.91 8.70 -74.05 -0.64 -3.56 16 36 H -0.28 -0.37 7.11 99.48 0.71 0.34 16 37 H -0.30 -1.50 7.11 99.48 0.71 -0.79 16 38 H 0.07 -0.46 7.65 -2.39 -0.02 -0.48 16 39 H 0.12 -0.84 8.14 -2.39 -0.02 -0.86 16 40 H 0.07 -0.47 7.65 -2.39 -0.02 -0.49 16 41 H 0.16 -0.53 4.50 -2.91 -0.01 -0.55 16 42 H 0.07 -0.36 7.66 -2.39 -0.02 -0.37 16 43 H 0.07 -0.33 7.66 -2.39 -0.02 -0.35 16 44 H 0.11 -0.44 8.14 -2.39 -0.02 -0.46 16 45 H 0.09 -0.24 8.14 -2.39 -0.02 -0.26 16 46 H 0.09 -0.22 8.09 -2.39 -0.02 -0.24 16 Total: 0.00 -28.01 383.04 2.01 -25.99 By element: Atomic # 1 Polarization: -15.86 SS G_CDS: -0.18 Total: -16.05 kcal Atomic # 6 Polarization: 5.57 SS G_CDS: 5.84 Total: 11.40 kcal Atomic # 7 Polarization: 0.99 SS G_CDS: -2.35 Total: -1.36 kcal Atomic # 8 Polarization: -16.63 SS G_CDS: -3.34 Total: -19.97 kcal Atomic # 14 Polarization: -2.08 SS G_CDS: 2.05 Total: -0.02 kcal Total: -28.01 2.01 -25.99 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10970304_12297780.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -134.350 kcal (2) G-P(sol) polarization free energy of solvation -28.007 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -162.356 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.014 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.993 kcal (6) G-S(sol) free energy of system = (1) + (5) -160.342 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.15 seconds