Wall clock time and date at job start Sat Mar 6 2021 15:34:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45196 * 1 3 3 C 1.34233 * 117.00341 * 2 1 4 4 O 1.20823 * 120.00083 * 359.97438 * 3 2 1 5 5 C 1.50698 * 119.99897 * 179.97438 * 3 2 1 6 6 H 1.08998 * 112.84996 * 311.19167 * 5 3 2 7 7 C 1.53778 * 113.69240 * 82.46824 * 5 3 2 8 8 C 1.53778 * 87.08449 * 139.98944 * 7 5 3 9 9 H 1.09000 * 113.61263 * 89.11673 * 8 7 5 10 10 N 1.46502 * 113.61376 * 220.01807 * 8 7 5 11 11 C 1.34777 * 119.99843 * 252.49489 * 10 8 7 12 12 O 1.21544 * 119.99935 * 0.02562 * 11 10 8 13 13 C 1.47854 * 119.99815 * 179.97438 * 11 10 8 14 14 C 1.39463 * 120.11458 * 179.72206 * 13 11 10 15 15 C 1.38589 * 119.78554 * 179.76965 * 14 13 11 16 16 N 1.40225 * 119.99538 * 180.27505 * 15 14 13 17 17 C 1.36571 * 125.66616 * 269.93130 * 16 15 14 18 18 C 1.50696 * 125.90107 * 359.95582 * 17 16 15 19 19 C 1.34855 * 108.19493 * 179.82869 * 17 16 15 20 20 C 1.40938 * 107.47039 * 0.42484 * 19 17 16 21 21 C 1.50702 * 126.26939 * 179.75373 * 20 19 17 22 22 O 1.42899 * 109.47084 * 254.97719 * 21 20 19 23 23 Si 1.86304 * 109.46671 * 14.97576 * 21 20 19 24 24 C 1.34858 * 107.46659 * 359.73701 * 20 19 17 25 25 C 1.50700 * 125.89782 * 180.02562 * 24 20 19 26 26 C 1.38911 * 120.00817 * 0.51327 * 15 14 13 27 27 C 1.50698 * 119.88199 * 179.76204 * 26 15 14 28 28 C 1.38258 * 120.22838 * 359.74059 * 26 15 14 29 29 C 1.37969 * 120.22013 * 0.02562 * 28 26 15 30 30 C 1.53784 * 87.08081 * 334.56700 * 8 7 5 31 31 H 1.08999 * 109.47309 * 179.97438 * 1 2 3 32 32 H 1.09000 * 109.47155 * 300.00282 * 1 2 3 33 33 H 1.09004 * 109.46861 * 59.99967 * 1 2 3 34 34 H 1.08999 * 113.61111 * 254.54007 * 7 5 3 35 35 H 1.09004 * 113.61682 * 25.43403 * 7 5 3 36 36 H 0.97002 * 120.00147 * 72.49618 * 10 8 7 37 37 H 1.08004 * 120.10770 * 0.02567 * 14 13 11 38 38 H 1.09004 * 109.46913 * 90.00403 * 18 17 16 39 39 H 1.09000 * 109.47329 * 209.99767 * 18 17 16 40 40 H 1.08992 * 109.47104 * 330.00430 * 18 17 16 41 41 H 1.08004 * 126.26516 * 180.19188 * 19 17 16 42 42 H 1.09001 * 109.47230 * 134.97476 * 21 20 19 43 43 H 0.96697 * 114.00336 * 59.99644 * 22 21 20 44 44 H 1.48503 * 109.99457 * 179.97438 * 23 21 20 45 45 H 1.48494 * 110.00001 * 301.31649 * 23 21 20 46 46 H 1.08995 * 109.46807 * 269.99254 * 25 24 20 47 47 H 1.09002 * 109.47236 * 29.99901 * 25 24 20 48 48 H 1.08996 * 109.46597 * 149.99630 * 25 24 20 49 49 H 1.08996 * 109.47820 * 269.97628 * 27 26 15 50 50 H 1.08999 * 109.47224 * 29.98141 * 27 26 15 51 51 H 1.09002 * 109.47066 * 149.97469 * 27 26 15 52 52 H 1.08002 * 119.88946 * 180.02562 * 28 26 15 53 53 H 1.08004 * 120.01325 * 179.97438 * 29 28 26 54 54 H 1.09004 * 113.61451 * 270.88641 * 30 8 7 55 55 H 1.08994 * 113.61477 * 139.97943 * 30 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4035 2.2093 -0.0005 5 6 3.5663 1.2747 0.0006 6 1 4.0233 0.6364 0.7568 7 6 4.1936 1.1224 -1.3952 8 6 5.1829 2.2260 -0.9848 9 1 6.0818 1.8476 -0.4981 10 7 5.4739 3.1814 -2.0566 11 6 6.6730 3.1596 -2.6716 12 8 7.5127 2.3469 -2.3373 13 6 6.9664 4.1235 -3.7536 14 6 8.2085 4.1069 -4.3877 15 6 8.4746 5.0103 -5.4044 16 7 9.7199 4.9937 -6.0488 17 6 10.8216 5.7069 -5.6710 18 6 10.9066 6.6443 -4.4941 19 6 11.8211 5.4251 -6.5313 20 6 11.3177 4.5129 -7.4805 21 6 12.0784 3.9212 -8.6391 22 8 11.6586 4.5463 -9.8536 23 14 13.9033 4.2047 -8.3933 24 6 10.0307 4.2662 -7.1620 25 6 9.0971 3.3462 -7.9056 26 6 7.5096 5.9356 -5.7817 27 6 7.8039 6.9202 -6.8840 28 6 6.2800 5.9560 -5.1499 29 6 6.0034 5.0577 -4.1399 30 6 4.1078 2.7141 0.0006 31 1 -0.3634 -1.0276 -0.0005 32 1 -0.3633 0.5139 0.8900 33 1 -0.3633 0.5139 -0.8900 34 1 4.6642 0.1530 -1.5589 35 1 3.5274 1.4131 -2.2074 36 1 4.8036 3.8297 -2.3236 37 1 8.9591 3.3895 -4.0902 38 1 11.2261 6.0908 -3.6111 39 1 11.6276 7.4330 -4.7091 40 1 9.9276 7.0870 -4.3108 41 1 12.8227 5.8278 -6.5010 42 1 11.8812 2.8506 -8.6944 43 1 11.8042 5.5020 -9.8749 44 1 14.6647 3.6252 -9.5289 45 1 14.1811 5.6593 -8.2844 46 1 8.5745 3.9075 -8.6801 47 1 9.6701 2.5405 -8.3646 48 1 8.3714 2.9252 -7.2097 49 1 8.2416 7.8228 -6.4577 50 1 8.5045 6.4756 -7.5908 51 1 6.8785 7.1743 -7.4009 52 1 5.5337 6.6774 -5.4479 53 1 5.0419 5.0769 -3.6483 54 1 3.4181 3.4401 -0.4301 55 1 4.5092 3.0296 0.9636 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10970304_12335842.mol2 55 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:34:08 Heat of formation + Delta-G solvation = -43.448482 kcal Electronic energy + Delta-G solvation = -37385.487079 eV Core-core repulsion = 32549.102867 eV Total energy + Delta-G solvation = -4836.384212 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 399.192 amu Computer time = 1.58 seconds Orbital eigenvalues (eV) -42.95153 -42.04262 -41.25195 -39.96641 -38.99869 -37.81273 -37.44369 -35.15044 -34.12740 -33.70167 -33.63176 -30.65605 -30.14714 -29.55175 -28.66830 -27.29070 -26.84407 -26.62664 -24.71688 -24.06236 -23.68124 -22.46342 -21.89098 -21.09961 -20.77919 -20.14319 -19.03861 -18.66590 -18.07888 -17.58389 -17.52386 -17.44421 -17.17925 -16.81026 -16.33005 -16.31077 -16.04465 -15.95676 -15.55579 -15.39974 -15.02970 -14.90635 -14.80282 -14.63142 -14.46177 -14.28933 -14.26992 -14.10489 -13.97156 -13.67137 -13.56775 -13.46371 -13.39826 -13.20145 -13.15109 -13.05357 -12.97886 -12.80309 -12.69354 -12.55108 -12.44117 -12.32934 -12.13515 -11.86020 -11.82923 -11.68539 -11.44696 -11.18569 -10.50304 -10.28776 -10.18739 -9.90717 -9.71621 -8.81918 -4.83725 -0.46025 -0.03459 1.04893 1.07641 1.42890 1.57153 1.60900 1.67132 1.76880 1.80331 2.01698 2.11774 2.53009 3.22093 3.29804 3.43755 3.57789 3.60106 3.64155 3.67817 3.72110 3.75320 3.87765 3.98915 4.01102 4.10528 4.14172 4.25260 4.28074 4.31685 4.35127 4.42290 4.49209 4.50956 4.56139 4.57202 4.58809 4.61691 4.64717 4.68264 4.69548 4.71548 4.75386 4.81422 4.91472 4.95153 4.97226 5.01308 5.03492 5.04188 5.08030 5.13011 5.24941 5.32108 5.37395 5.40940 5.54285 5.99761 6.16080 6.36232 6.49183 6.59407 6.63749 7.03229 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.365 6.365 3 C 0.472 3.528 4 O -0.535 6.535 5 C -0.106 4.106 6 H 0.151 0.849 7 C -0.130 4.130 8 C 0.124 3.876 9 H 0.118 0.882 10 N -0.700 5.700 11 C 0.563 3.437 12 O -0.574 6.574 13 C -0.144 4.144 14 C -0.052 4.052 15 C 0.089 3.911 16 N -0.400 5.400 17 C 0.021 3.979 18 C -0.083 4.083 19 C -0.200 4.200 20 C -0.201 4.201 21 C -0.045 4.045 22 O -0.550 6.550 23 Si 0.769 3.231 24 C 0.041 3.959 25 C -0.079 4.079 26 C -0.043 4.043 27 C -0.119 4.119 28 C -0.113 4.113 29 C -0.056 4.056 30 C -0.118 4.118 31 H 0.127 0.873 32 H 0.062 0.938 33 H 0.062 0.938 34 H 0.092 0.908 35 H 0.092 0.908 36 H 0.416 0.584 37 H 0.120 0.880 38 H 0.074 0.926 39 H 0.094 0.906 40 H 0.062 0.938 41 H 0.150 0.850 42 H 0.111 0.889 43 H 0.382 0.618 44 H -0.305 1.305 45 H -0.283 1.283 46 H 0.073 0.927 47 H 0.084 0.916 48 H 0.058 0.942 49 H 0.084 0.916 50 H 0.055 0.945 51 H 0.093 0.907 52 H 0.170 0.830 53 H 0.167 0.833 54 H 0.101 0.899 55 H 0.100 0.900 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.061 2.174 2.912 6.230 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.281 6.281 3 C 0.316 3.684 4 O -0.425 6.425 5 C -0.125 4.125 6 H 0.168 0.832 7 C -0.169 4.169 8 C 0.019 3.981 9 H 0.135 0.865 10 N -0.352 5.352 11 C 0.351 3.649 12 O -0.454 6.454 13 C -0.147 4.147 14 C -0.072 4.072 15 C 0.000 4.000 16 N -0.075 5.075 17 C -0.087 4.087 18 C -0.140 4.140 19 C -0.224 4.224 20 C -0.207 4.207 21 C -0.155 4.155 22 O -0.358 6.358 23 Si 0.675 3.325 24 C -0.069 4.069 25 C -0.136 4.136 26 C -0.044 4.044 27 C -0.176 4.176 28 C -0.131 4.131 29 C -0.074 4.074 30 C -0.156 4.156 31 H 0.145 0.855 32 H 0.080 0.920 33 H 0.080 0.920 34 H 0.110 0.890 35 H 0.110 0.890 36 H 0.254 0.746 37 H 0.138 0.862 38 H 0.092 0.908 39 H 0.112 0.888 40 H 0.081 0.919 41 H 0.168 0.832 42 H 0.129 0.871 43 H 0.231 0.769 44 H -0.233 1.233 45 H -0.210 1.210 46 H 0.092 0.908 47 H 0.103 0.897 48 H 0.077 0.923 49 H 0.102 0.898 50 H 0.074 0.926 51 H 0.112 0.888 52 H 0.188 0.812 53 H 0.184 0.816 54 H 0.120 0.880 55 H 0.118 0.882 Dipole moment (debyes) X Y Z Total from point charges -4.456 1.643 2.870 5.549 hybrid contribution -0.951 0.908 -0.714 1.496 sum -5.407 2.551 2.155 6.355 Atomic orbital electron populations 1.23526 0.75021 1.05573 1.02500 1.86525 1.24784 1.33288 1.83468 1.23961 0.92458 0.81005 0.70982 1.90663 1.67849 1.37270 1.46700 1.22426 0.85988 1.01754 1.02367 0.83167 1.23431 0.97612 1.01179 0.94637 1.22466 0.97795 0.89731 0.88077 0.86458 1.45741 1.15481 1.37046 1.36899 1.18380 0.82021 0.82919 0.81562 1.90793 1.47963 1.40567 1.66062 1.19711 0.95591 0.99863 0.99559 1.21207 0.96485 0.96450 0.93042 1.17408 0.85998 0.99529 0.97076 1.41335 1.07870 1.35812 1.22461 1.20729 0.86190 1.00745 1.01069 1.20356 1.03174 0.97036 0.93422 1.20752 0.99441 1.04233 0.97962 1.19630 0.94280 1.05636 1.01194 1.24415 1.09370 0.99515 0.82155 1.86532 1.85327 1.26603 1.37338 0.93821 0.72964 0.80375 0.85373 1.20463 0.96046 0.99957 0.90446 1.20273 0.97346 0.97353 0.98663 1.20508 0.93043 0.94443 0.96437 1.20881 1.03627 0.97401 0.95684 1.21315 0.96082 0.99936 0.95736 1.21743 0.98868 0.91675 0.95154 1.23341 0.96361 0.94656 1.01213 0.85531 0.91951 0.91953 0.88976 0.88978 0.74573 0.86210 0.90775 0.88755 0.91883 0.83237 0.87142 0.76947 1.23304 1.20977 0.90827 0.89707 0.92282 0.89788 0.92592 0.88782 0.81244 0.81608 0.88049 0.88154 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.06 10.56 113.37 1.20 1.13 16 2 O -0.36 -0.54 10.56 -51.45 -0.54 -1.09 16 3 C 0.47 0.79 7.49 71.24 0.53 1.32 16 4 O -0.54 -3.80 15.65 21.97 0.34 -3.45 16 5 C -0.11 0.47 4.26 -11.01 -0.05 0.42 16 6 H 0.15 -1.21 8.14 -2.39 -0.02 -1.23 16 7 C -0.13 0.58 7.43 31.12 0.23 0.81 16 8 C 0.12 -0.48 4.24 45.52 0.19 -0.29 16 9 H 0.12 -0.16 7.47 -2.39 -0.02 -0.18 16 10 N -0.70 2.64 5.31 -442.90 -2.35 0.29 16 11 C 0.56 1.70 7.77 86.79 0.67 2.37 16 12 O -0.57 -6.69 15.95 -3.85 -0.06 -6.75 16 13 C -0.14 -0.06 5.87 -20.10 -0.12 -0.18 16 14 C -0.05 -0.22 9.51 22.65 0.22 0.00 16 15 C 0.09 0.23 4.49 38.04 0.17 0.40 16 16 N -0.40 -1.83 1.85 -320.36 -0.59 -2.42 16 17 C 0.02 0.09 6.86 41.04 0.28 0.37 16 18 C -0.08 0.03 10.09 71.23 0.72 0.74 16 19 C -0.20 -0.86 9.27 22.15 0.21 -0.66 16 20 C -0.20 -1.04 5.35 -19.98 -0.11 -1.15 16 21 C -0.04 -0.17 2.60 71.24 0.19 0.01 16 22 O -0.55 -3.30 12.88 -148.98 -1.92 -5.22 16 23 Si 0.77 1.78 30.86 68.60 2.12 3.90 16 24 C 0.04 0.23 6.32 41.05 0.26 0.49 16 25 C -0.08 -0.26 9.88 71.24 0.70 0.44 16 26 C -0.04 0.07 5.90 -19.70 -0.12 -0.05 16 27 C -0.12 0.35 9.76 71.24 0.70 1.05 16 28 C -0.11 0.71 9.67 22.21 0.21 0.93 16 29 C -0.06 0.35 9.54 22.54 0.21 0.57 16 30 C -0.12 0.67 7.16 31.12 0.22 0.89 16 31 H 0.13 -0.94 8.14 -2.39 -0.02 -0.96 16 32 H 0.06 -0.11 8.13 -2.39 -0.02 -0.13 16 33 H 0.06 -0.13 8.13 -2.38 -0.02 -0.15 16 34 H 0.09 -0.39 8.14 -2.39 -0.02 -0.41 16 35 H 0.09 -0.39 8.10 -2.38 -0.02 -0.41 16 36 H 0.42 -3.95 6.76 -92.71 -0.63 -4.58 16 37 H 0.12 1.03 7.65 -2.91 -0.02 1.00 16 38 H 0.07 -0.03 8.14 -2.38 -0.02 -0.05 16 39 H 0.09 -0.29 8.14 -2.39 -0.02 -0.31 16 40 H 0.06 -0.04 7.83 -2.39 -0.02 -0.06 16 41 H 0.15 0.27 6.52 -2.91 -0.02 0.25 16 42 H 0.11 0.32 7.50 -2.39 -0.02 0.30 16 43 H 0.38 0.36 8.70 -74.06 -0.64 -0.28 16 44 H -0.30 -2.81 7.11 99.48 0.71 -2.10 16 45 H -0.28 -1.64 7.01 99.48 0.70 -0.94 16 46 H 0.07 0.20 8.14 -2.39 -0.02 0.18 16 47 H 0.08 0.22 7.50 -2.39 -0.02 0.20 16 48 H 0.06 0.20 7.83 -2.39 -0.02 0.19 16 49 H 0.08 -0.31 8.14 -2.39 -0.02 -0.33 16 50 H 0.06 0.08 6.98 -2.39 -0.02 0.06 16 51 H 0.09 -0.62 8.08 -2.39 -0.02 -0.64 16 52 H 0.17 -2.05 8.06 -2.91 -0.02 -2.07 16 53 H 0.17 -2.21 6.40 -2.91 -0.02 -2.23 16 54 H 0.10 -0.49 7.41 -2.39 -0.02 -0.51 16 55 H 0.10 -0.73 8.14 -2.39 -0.02 -0.75 16 Total: 0.00 -24.44 455.39 3.21 -21.23 By element: Atomic # 1 Polarization: -15.81 SS G_CDS: -0.31 Total: -16.11 kcal Atomic # 6 Polarization: 3.10 SS G_CDS: 6.53 Total: 9.63 kcal Atomic # 7 Polarization: 0.81 SS G_CDS: -2.94 Total: -2.13 kcal Atomic # 8 Polarization: -14.33 SS G_CDS: -2.18 Total: -16.51 kcal Atomic # 14 Polarization: 1.78 SS G_CDS: 2.12 Total: 3.90 kcal Total: -24.44 3.21 -21.23 kcal The number of atoms in the molecule is 55 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10970304_12335842.mol2 55 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -22.223 kcal (2) G-P(sol) polarization free energy of solvation -24.440 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -46.663 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 3.214 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.226 kcal (6) G-S(sol) free energy of system = (1) + (5) -43.448 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.59 seconds