Wall clock time and date at job start Sat Mar 6 2021 15:34:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45199 * 1 3 3 C 1.34220 * 117.00282 * 2 1 4 4 O 1.20832 * 119.99756 * 359.97438 * 3 2 1 5 5 C 1.50702 * 120.00601 * 179.97438 * 3 2 1 6 6 H 1.08997 * 112.84615 * 48.79627 * 5 3 2 7 7 C 1.53778 * 113.62122 * 179.97438 * 5 3 2 8 8 C 1.53780 * 87.07996 * 139.97874 * 7 5 3 9 9 H 1.09006 * 113.61127 * 89.20396 * 8 7 5 10 10 N 1.46505 * 113.61431 * 220.01938 * 8 7 5 11 11 C 1.34777 * 119.99724 * 205.00632 * 10 8 7 12 12 O 1.21553 * 120.00290 * 359.97438 * 11 10 8 13 13 C 1.47862 * 119.99564 * 179.72337 * 11 10 8 14 14 C 1.39569 * 120.11562 * 359.97438 * 13 11 10 15 15 C 1.38012 * 119.98590 * 179.76154 * 14 13 11 16 16 C 1.38220 * 120.21820 * 0.51872 * 15 14 13 17 17 C 1.38947 * 120.22816 * 359.73440 * 16 15 14 18 18 N 1.40218 * 119.99769 * 180.02562 * 17 16 15 19 19 C 1.36565 * 125.67121 * 114.67148 * 18 17 16 20 20 C 1.50699 * 125.89709 * 0.02562 * 19 18 17 21 21 C 1.34851 * 108.20455 * 179.89083 * 19 18 17 22 22 C 1.40938 * 107.46577 * 0.36554 * 21 19 18 23 23 C 1.50698 * 126.26619 * 179.78751 * 22 21 19 24 24 O 1.42900 * 109.46671 * 104.97983 * 23 22 21 25 25 Si 1.86296 * 109.47107 * 344.98009 * 23 22 21 26 26 C 1.34857 * 107.46771 * 359.77351 * 22 21 19 27 27 C 1.50696 * 125.89816 * 180.02562 * 26 22 21 28 28 C 1.38555 * 120.00638 * 0.02562 * 17 16 15 29 29 C 1.53774 * 87.08480 * 334.57140 * 8 7 5 30 30 H 1.09006 * 109.47248 * 300.00147 * 1 2 3 31 31 H 1.08995 * 109.47040 * 60.00135 * 1 2 3 32 32 H 1.09005 * 109.47120 * 180.02562 * 1 2 3 33 33 H 1.09001 * 113.61046 * 25.43233 * 7 5 3 34 34 H 1.08996 * 113.68992 * 254.54291 * 7 5 3 35 35 H 0.97000 * 119.99792 * 25.00200 * 10 8 7 36 36 H 1.08006 * 120.00438 * 0.02562 * 14 13 11 37 37 H 1.08001 * 119.89141 * 180.25101 * 15 14 13 38 38 H 1.07998 * 119.89140 * 179.76518 * 16 15 14 39 39 H 1.09005 * 109.47399 * 90.00074 * 20 19 18 40 40 H 1.09003 * 109.47805 * 209.99864 * 20 19 18 41 41 H 1.09001 * 109.47371 * 330.00465 * 20 19 18 42 42 H 1.08002 * 126.26697 * 180.11743 * 21 19 18 43 43 H 1.08998 * 109.47345 * 224.97515 * 23 22 21 44 44 H 0.96697 * 113.99938 * 299.99500 * 24 23 22 45 45 H 1.48503 * 110.00223 * 58.68081 * 25 23 22 46 46 H 1.48504 * 109.99682 * 179.97438 * 25 23 22 47 47 H 1.09001 * 109.47297 * 269.97045 * 27 26 22 48 48 H 1.08998 * 109.47213 * 29.97424 * 27 26 22 49 49 H 1.09000 * 109.47190 * 149.97456 * 27 26 22 50 50 H 1.08008 * 120.10081 * 180.02562 * 28 17 16 51 51 H 1.08994 * 113.61732 * 139.98131 * 29 8 7 52 52 H 1.09001 * 113.61275 * 270.88238 * 29 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4033 2.2093 -0.0005 5 6 3.5663 1.2748 0.0006 6 1 4.0239 0.6361 -0.7548 7 6 4.1079 2.7141 -0.0001 8 6 5.1806 2.2273 0.9883 9 1 6.0813 1.8496 0.5040 10 7 5.4693 3.1842 2.0594 11 6 6.6670 3.1633 2.6770 12 8 7.5076 2.3501 2.3457 13 6 6.9605 4.1331 3.7539 14 6 5.9992 5.0715 4.1323 15 6 6.2742 5.9722 5.1412 16 6 7.5038 5.9559 5.7723 17 6 8.4693 5.0290 5.3991 18 7 9.7149 5.0164 6.0430 19 6 10.1970 4.0058 6.8248 20 6 9.4836 2.7167 7.1419 21 6 11.4228 4.3592 7.2617 22 6 11.7062 5.6369 6.7386 23 6 12.9646 6.4343 6.9660 24 8 13.7734 6.3934 5.7887 25 14 13.9114 5.7060 8.3956 26 6 10.6451 6.0152 5.9972 27 6 10.5096 7.3152 5.2473 28 6 8.2015 4.1171 4.3909 29 6 4.1906 1.1243 1.3979 30 1 -0.3634 0.5139 0.8900 31 1 -0.3633 0.5138 -0.8900 32 1 -0.3634 -1.0277 0.0005 33 1 3.4172 3.4406 0.4280 34 1 4.5114 3.0297 -0.9622 35 1 4.7984 3.8329 2.3240 36 1 5.0388 5.0900 3.6386 37 1 5.5277 6.6951 5.4355 38 1 7.7147 6.6656 6.5585 39 1 9.7353 1.9679 6.3909 40 1 9.7925 2.3628 8.1256 41 1 8.4070 2.8869 7.1386 42 1 12.0676 3.7725 7.8993 43 1 12.7038 7.4682 7.1919 44 1 14.0435 5.5023 5.5278 45 1 14.2454 4.2868 8.1134 46 1 15.1550 6.4831 8.6296 47 1 10.0519 8.0626 5.8954 48 1 11.4958 7.6595 4.9357 49 1 9.8831 7.1640 4.3682 50 1 8.9507 3.3957 4.0999 51 1 4.6608 0.1551 1.5640 52 1 3.5226 1.4161 2.2083 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10970304_12335854.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:34:12 Heat of formation + Delta-G solvation = -40.755773 kcal Electronic energy + Delta-G solvation = -34805.381020 eV Core-core repulsion = 30124.651191 eV Total energy + Delta-G solvation = -4680.729829 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 385.177 amu Computer time = 1.61 seconds Orbital eigenvalues (eV) -42.90583 -42.05407 -41.25170 -39.85260 -38.93276 -37.83219 -37.44727 -35.06431 -34.08399 -33.71039 -32.33232 -30.51342 -30.15033 -29.36568 -27.27600 -27.08895 -26.85774 -25.12518 -24.67866 -23.69667 -22.56960 -21.90516 -21.13296 -20.84469 -20.21004 -19.05341 -18.68376 -18.07324 -17.62083 -17.47557 -17.43722 -17.34874 -16.98351 -16.49903 -16.36614 -16.02504 -15.90757 -15.57719 -15.40701 -15.02052 -14.97057 -14.70331 -14.49808 -14.33726 -14.28917 -14.14282 -14.03877 -13.76881 -13.61199 -13.47707 -13.42031 -13.26703 -13.20333 -13.02004 -12.95000 -12.74918 -12.57057 -12.45208 -12.34584 -12.17866 -11.86582 -11.84315 -11.70298 -11.45529 -11.20556 -10.53035 -10.43172 -10.33251 -10.11418 -9.53408 -8.84588 -4.85154 -0.44752 -0.05770 1.04339 1.08178 1.42727 1.58981 1.60832 1.67092 1.74538 1.78059 2.02491 2.09363 2.56397 3.20809 3.28683 3.46029 3.55716 3.62107 3.66880 3.67739 3.72998 3.88718 3.92020 3.97111 4.00605 4.10108 4.18707 4.25050 4.27919 4.32244 4.38338 4.43732 4.50068 4.55227 4.60560 4.61730 4.64612 4.67318 4.68090 4.70703 4.72312 4.80264 4.90173 4.96095 4.99024 5.01855 5.03762 5.06962 5.14202 5.17215 5.31414 5.34230 5.39333 5.54153 5.96773 6.13355 6.34281 6.45528 6.55667 6.63202 7.00932 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.364 6.364 3 C 0.472 3.528 4 O -0.535 6.535 5 C -0.106 4.106 6 H 0.150 0.850 7 C -0.118 4.118 8 C 0.123 3.877 9 H 0.116 0.884 10 N -0.699 5.699 11 C 0.561 3.439 12 O -0.575 6.575 13 C -0.134 4.134 14 C -0.066 4.066 15 C -0.101 4.101 16 C -0.081 4.081 17 C 0.096 3.904 18 N -0.405 5.405 19 C 0.015 3.985 20 C -0.083 4.083 21 C -0.199 4.199 22 C -0.202 4.202 23 C -0.045 4.045 24 O -0.552 6.552 25 Si 0.775 3.225 26 C 0.040 3.960 27 C -0.083 4.083 28 C -0.065 4.065 29 C -0.129 4.129 30 H 0.062 0.938 31 H 0.062 0.938 32 H 0.127 0.873 33 H 0.102 0.898 34 H 0.099 0.901 35 H 0.416 0.584 36 H 0.166 0.834 37 H 0.175 0.825 38 H 0.146 0.854 39 H 0.067 0.933 40 H 0.098 0.902 41 H 0.063 0.937 42 H 0.150 0.850 43 H 0.117 0.883 44 H 0.381 0.619 45 H -0.290 1.290 46 H -0.304 1.304 47 H 0.089 0.911 48 H 0.080 0.920 49 H 0.060 0.940 50 H 0.116 0.884 51 H 0.092 0.908 52 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.773 0.870 1.920 8.054 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.281 6.281 3 C 0.316 3.684 4 O -0.425 6.425 5 C -0.125 4.125 6 H 0.168 0.832 7 C -0.156 4.156 8 C 0.018 3.982 9 H 0.134 0.866 10 N -0.351 5.351 11 C 0.349 3.651 12 O -0.455 6.455 13 C -0.138 4.138 14 C -0.085 4.085 15 C -0.119 4.119 16 C -0.100 4.100 17 C 0.007 3.993 18 N -0.080 5.080 19 C -0.094 4.094 20 C -0.140 4.140 21 C -0.222 4.222 22 C -0.209 4.209 23 C -0.155 4.155 24 O -0.360 6.360 25 Si 0.681 3.319 26 C -0.069 4.069 27 C -0.140 4.140 28 C -0.085 4.085 29 C -0.168 4.168 30 H 0.081 0.919 31 H 0.080 0.920 32 H 0.145 0.855 33 H 0.120 0.880 34 H 0.118 0.882 35 H 0.255 0.745 36 H 0.183 0.817 37 H 0.192 0.808 38 H 0.164 0.836 39 H 0.086 0.914 40 H 0.116 0.884 41 H 0.082 0.918 42 H 0.168 0.832 43 H 0.135 0.865 44 H 0.230 0.770 45 H -0.217 1.217 46 H -0.232 1.232 47 H 0.108 0.892 48 H 0.099 0.901 49 H 0.079 0.921 50 H 0.134 0.866 51 H 0.110 0.890 52 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges -7.080 0.840 1.815 7.357 hybrid contribution 0.048 -0.472 -1.157 1.250 sum -7.032 0.368 0.658 7.072 Atomic orbital electron populations 1.23529 0.74993 1.05580 1.02516 1.86522 1.24804 1.33267 1.83457 1.23947 0.92433 0.81018 0.70997 1.90666 1.67832 1.37270 1.46694 1.22419 0.86047 1.01703 1.02354 0.83222 1.23339 0.96393 0.94715 1.01155 1.22471 0.97806 0.89784 0.88101 0.86605 1.45741 1.15562 1.36950 1.36815 1.18430 0.82026 0.83006 0.81601 1.90795 1.47904 1.40733 1.66078 1.19727 0.95554 0.99379 0.99126 1.21783 0.98904 0.92003 0.95763 1.21447 0.96419 0.99173 0.94841 1.21672 0.92338 0.96968 0.99038 1.17666 0.85768 0.99862 0.95998 1.41514 1.12435 1.15478 1.38532 1.20743 0.96209 0.92882 0.99536 1.20365 0.99270 0.91015 1.03383 1.20791 0.96757 0.97423 1.07253 1.19671 0.97480 0.97589 1.06141 1.24463 0.91115 1.04379 0.95556 1.86524 1.70542 1.34284 1.44656 0.93889 0.78939 0.75642 0.83430 1.20592 0.89715 0.92840 1.03765 1.20361 1.03646 0.91276 0.98736 1.21118 0.96681 0.97642 0.93075 1.23423 0.97581 1.01120 0.94628 0.91904 0.91970 0.85525 0.87971 0.88241 0.74489 0.81652 0.80794 0.83578 0.91391 0.88353 0.91805 0.83225 0.86531 0.77005 1.21685 1.23215 0.89225 0.90086 0.92111 0.86634 0.88966 0.88848 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.07 10.56 113.37 1.20 1.13 16 2 O -0.36 -0.50 10.56 -51.32 -0.54 -1.04 16 3 C 0.47 0.75 7.48 71.24 0.53 1.29 16 4 O -0.54 -3.74 15.65 21.95 0.34 -3.40 16 5 C -0.11 0.47 4.26 -11.01 -0.05 0.42 16 6 H 0.15 -1.19 8.14 -2.39 -0.02 -1.21 16 7 C -0.12 0.65 7.16 31.12 0.22 0.88 16 8 C 0.12 -0.46 4.24 45.51 0.19 -0.27 16 9 H 0.12 -0.11 7.46 -2.38 -0.02 -0.13 16 10 N -0.70 2.61 5.31 -442.88 -2.35 0.26 16 11 C 0.56 1.78 7.77 86.79 0.67 2.45 16 12 O -0.57 -6.93 15.95 -3.88 -0.06 -6.99 16 13 C -0.13 -0.04 5.87 -20.10 -0.12 -0.15 16 14 C -0.07 0.46 9.54 22.54 0.21 0.68 16 15 C -0.10 0.80 10.02 22.21 0.22 1.02 16 16 C -0.08 0.27 9.72 22.44 0.22 0.49 16 17 C 0.10 0.21 4.65 38.04 0.18 0.39 16 18 N -0.40 -1.97 2.79 -320.37 -0.89 -2.86 16 19 C 0.01 0.07 6.81 41.04 0.28 0.35 16 20 C -0.08 -0.09 9.94 71.24 0.71 0.62 16 21 C -0.20 -0.98 9.27 22.15 0.21 -0.77 16 22 C -0.20 -1.04 5.35 -19.98 -0.11 -1.15 16 23 C -0.05 -0.16 2.50 71.24 0.18 0.02 16 24 O -0.55 -3.67 12.88 -148.98 -1.92 -5.59 16 25 Si 0.77 1.53 30.86 68.60 2.12 3.65 16 26 C 0.04 0.21 6.81 41.04 0.28 0.49 16 27 C -0.08 -0.11 9.72 71.23 0.69 0.58 16 28 C -0.06 -0.27 9.28 22.65 0.21 -0.06 16 29 C -0.13 0.58 7.43 31.12 0.23 0.81 16 30 H 0.06 -0.14 8.13 -2.38 -0.02 -0.16 16 31 H 0.06 -0.12 8.13 -2.39 -0.02 -0.14 16 32 H 0.13 -0.96 8.14 -2.38 -0.02 -0.98 16 33 H 0.10 -0.49 7.41 -2.39 -0.02 -0.51 16 34 H 0.10 -0.69 8.14 -2.39 -0.02 -0.71 16 35 H 0.42 -4.02 6.76 -92.71 -0.63 -4.64 16 36 H 0.17 -2.30 6.40 -2.91 -0.02 -2.32 16 37 H 0.17 -2.47 8.06 -2.91 -0.02 -2.49 16 38 H 0.15 -0.79 8.06 -2.91 -0.02 -0.82 16 39 H 0.07 0.13 8.14 -2.38 -0.02 0.11 16 40 H 0.10 -0.22 8.14 -2.39 -0.02 -0.24 16 41 H 0.06 0.05 7.83 -2.39 -0.02 0.04 16 42 H 0.15 0.37 6.52 -2.91 -0.02 0.35 16 43 H 0.12 0.16 7.96 -2.39 -0.02 0.14 16 44 H 0.38 0.92 8.70 -74.06 -0.64 0.27 16 45 H -0.29 -1.88 7.01 99.48 0.70 -1.18 16 46 H -0.30 -2.66 7.11 99.48 0.71 -1.95 16 47 H 0.09 -0.22 8.14 -2.39 -0.02 -0.24 16 48 H 0.08 0.24 7.87 -2.39 -0.02 0.22 16 49 H 0.06 0.10 7.83 -2.39 -0.02 0.08 16 50 H 0.12 1.06 7.65 -2.91 -0.02 1.03 16 51 H 0.09 -0.40 8.14 -2.39 -0.02 -0.42 16 52 H 0.09 -0.42 8.09 -2.39 -0.02 -0.44 16 Total: 0.00 -25.69 436.37 2.58 -23.11 By element: Atomic # 1 Polarization: -16.05 SS G_CDS: -0.28 Total: -16.33 kcal Atomic # 6 Polarization: 3.05 SS G_CDS: 6.17 Total: 9.21 kcal Atomic # 7 Polarization: 0.64 SS G_CDS: -3.24 Total: -2.60 kcal Atomic # 8 Polarization: -14.85 SS G_CDS: -2.18 Total: -17.03 kcal Atomic # 14 Polarization: 1.53 SS G_CDS: 2.12 Total: 3.65 kcal Total: -25.69 2.58 -23.11 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10970304_12335854.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -17.650 kcal (2) G-P(sol) polarization free energy of solvation -25.687 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -43.337 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.582 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.105 kcal (6) G-S(sol) free energy of system = (1) + (5) -40.756 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.61 seconds