Wall clock time and date at job start Sat Mar 6 2021 15:34:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45202 * 1 3 3 C 1.34229 * 117.00141 * 2 1 4 4 O 1.20832 * 119.99860 * 0.02562 * 3 2 1 5 5 C 1.50696 * 119.99902 * 179.97438 * 3 2 1 6 6 H 1.08999 * 112.84719 * 48.81365 * 5 3 2 7 7 C 1.53783 * 113.61375 * 180.02562 * 5 3 2 8 8 C 1.53779 * 87.08347 * 140.06764 * 7 5 3 9 9 H 1.08998 * 113.61286 * 89.19824 * 8 7 5 10 10 N 1.46499 * 113.61706 * 220.01929 * 8 7 5 11 11 C 1.34771 * 120.00137 * 204.99784 * 10 8 7 12 12 O 1.21284 * 120.00034 * 0.02562 * 11 10 8 13 13 C 1.50699 * 119.99840 * 179.97438 * 11 10 8 14 14 C 1.50701 * 109.46986 * 180.02562 * 13 11 10 15 15 C 1.38276 * 119.93352 * 90.00009 * 14 13 11 16 16 C 1.38126 * 120.06695 * 180.02562 * 15 14 13 17 17 C 1.38828 * 119.93176 * 0.02562 * 16 15 14 18 18 N 1.40199 * 120.06497 * 179.97438 * 17 16 15 19 19 C 1.36572 * 125.66764 * 294.97550 * 18 17 16 20 20 C 1.50701 * 125.90087 * 0.04394 * 19 18 17 21 21 C 1.34851 * 108.20081 * 179.74229 * 19 18 17 22 22 C 1.40950 * 107.46748 * 0.43296 * 21 19 18 23 23 C 1.50699 * 126.26639 * 179.82857 * 22 21 19 24 24 O 1.42892 * 109.47249 * 104.69148 * 23 22 21 25 25 Si 1.86298 * 109.47032 * 344.68534 * 23 22 21 26 26 C 1.34847 * 107.46260 * 359.56799 * 22 21 19 27 27 C 1.50704 * 125.89799 * 180.24019 * 26 22 21 28 28 C 1.38824 * 119.86999 * 0.25625 * 17 16 15 29 29 C 1.38120 * 119.93235 * 359.48488 * 28 17 16 30 30 C 1.53780 * 87.07993 * 334.56676 * 8 7 5 31 31 H 1.09007 * 109.47228 * 59.99606 * 1 2 3 32 32 H 1.08996 * 109.47221 * 179.97438 * 1 2 3 33 33 H 1.09004 * 109.47104 * 300.00059 * 1 2 3 34 34 H 1.08997 * 113.61326 * 25.51517 * 7 5 3 35 35 H 1.09006 * 113.61400 * 254.62056 * 7 5 3 36 36 H 0.97006 * 119.99674 * 24.99849 * 10 8 7 37 37 H 1.08999 * 109.47402 * 60.00499 * 13 11 10 38 38 H 1.09004 * 109.47385 * 299.99669 * 13 11 10 39 39 H 1.08002 * 119.96873 * 359.97438 * 15 14 13 40 40 H 1.07997 * 120.03542 * 179.97438 * 16 15 14 41 41 H 1.08996 * 109.47285 * 90.00203 * 20 19 18 42 42 H 1.09001 * 109.47122 * 209.99883 * 20 19 18 43 43 H 1.08997 * 109.46764 * 329.99550 * 20 19 18 44 44 H 1.08000 * 126.27161 * 180.28524 * 21 19 18 45 45 H 1.09004 * 109.46453 * 224.69217 * 23 22 21 46 46 H 0.96703 * 114.00176 * 299.99748 * 24 23 22 47 47 H 1.48506 * 109.99834 * 58.68765 * 25 23 22 48 48 H 1.48502 * 110.00011 * 180.02562 * 25 23 22 49 49 H 1.09007 * 109.46900 * 90.02198 * 27 26 22 50 50 H 1.08993 * 109.47282 * 210.01776 * 27 26 22 51 51 H 1.09000 * 109.47211 * 330.03045 * 27 26 22 52 52 H 1.08004 * 120.03393 * 179.72759 * 28 17 16 53 53 H 1.07998 * 119.96915 * 180.25450 * 29 28 17 54 54 H 1.09004 * 113.61461 * 139.97527 * 30 8 7 55 55 H 1.08997 * 113.61656 * 270.88484 * 30 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2094 0.0005 5 6 3.5663 1.2748 0.0006 6 1 4.0239 0.6362 -0.7550 7 6 4.1078 2.7141 0.0011 8 6 5.1821 2.2260 0.9872 9 1 6.0819 1.8490 0.5011 10 7 5.4723 3.1814 2.0592 11 6 6.6709 3.1595 2.6751 12 8 7.5094 2.3493 2.3416 13 6 6.9696 4.1427 3.7775 14 6 8.3658 3.9091 4.2942 15 6 9.4335 4.5772 3.7235 16 6 10.7145 4.3648 4.1945 17 6 10.9294 3.4791 5.2418 18 7 12.2285 3.2610 5.7218 19 6 13.2513 2.6895 5.0199 20 6 13.1772 2.1878 3.6008 21 6 14.3408 2.6579 5.8139 22 6 13.9772 3.2205 7.0540 23 6 14.8740 3.3906 8.2530 24 8 15.2519 4.7633 8.3744 25 14 16.3997 2.3427 8.0409 26 6 12.6814 3.5841 6.9690 27 6 11.8726 4.2343 8.0617 28 6 9.8562 2.8054 5.8089 29 6 8.5770 3.0260 5.3371 30 6 4.1926 1.1224 1.3968 31 1 -0.3634 0.5139 -0.8900 32 1 -0.3633 -1.0276 -0.0005 33 1 -0.3633 0.5139 0.8900 34 1 3.4178 3.4400 0.4312 35 1 4.5098 3.0298 -0.9617 36 1 4.8018 3.8297 2.3258 37 1 6.2543 4.0074 4.5887 38 1 6.8913 5.1584 3.3896 39 1 9.2658 5.2652 2.9080 40 1 11.5481 4.8865 3.7481 41 1 13.4421 2.9936 2.9163 42 1 13.8724 1.3583 3.4719 43 1 12.1634 1.8487 3.3879 44 1 15.3134 2.2700 5.5490 45 1 14.3416 3.0794 9.1519 46 1 15.7310 5.1085 7.6086 47 1 17.1175 2.7357 6.8017 48 1 17.2922 2.5010 9.2172 49 1 11.9598 5.3180 7.9825 50 1 10.8265 3.9457 7.9602 51 1 12.2466 3.9098 9.0328 52 1 10.0209 2.1125 6.6208 53 1 7.7412 2.5053 5.7805 54 1 4.6631 0.1529 1.5608 55 1 3.5258 1.4131 2.2085 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10970304_12335864.mol2 55 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:34:20 Heat of formation + Delta-G solvation = -47.368440 kcal Electronic energy + Delta-G solvation = -36355.069326 eV Core-core repulsion = 31518.515131 eV Total energy + Delta-G solvation = -4836.554194 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 399.192 amu Computer time = 1.71 seconds Orbital eigenvalues (eV) -42.84476 -41.99645 -41.06091 -40.01858 -39.00095 -37.83753 -37.43675 -34.89037 -34.52420 -33.70859 -32.09954 -32.03388 -30.14416 -29.49531 -28.57745 -27.11821 -26.82149 -26.36656 -24.56195 -23.95810 -23.36439 -22.36340 -21.55535 -20.99527 -20.62031 -20.32811 -18.98308 -18.12344 -18.08683 -17.93768 -17.59158 -17.45890 -17.16038 -16.94226 -16.37664 -16.16837 -16.03728 -15.80257 -15.64919 -15.49599 -15.01262 -14.92475 -14.61237 -14.55884 -14.43826 -14.32007 -14.25356 -14.11008 -14.00642 -13.67942 -13.55014 -13.47689 -13.41733 -13.22709 -13.15196 -12.99776 -12.85473 -12.77229 -12.62731 -12.41546 -12.32846 -12.16043 -12.05685 -11.86211 -11.79655 -11.68988 -11.43180 -10.98128 -10.48187 -10.12912 -10.08506 -10.05577 -9.38608 -8.83337 -4.84116 -0.04672 0.28046 1.04924 1.13590 1.43448 1.61802 1.66484 1.67800 1.77002 1.84066 2.03338 2.19729 2.66145 3.24860 3.33634 3.56864 3.59093 3.66357 3.74055 3.75245 3.75353 3.85295 3.94580 3.98872 4.06899 4.13340 4.23381 4.25152 4.27701 4.28667 4.34232 4.43492 4.51028 4.54738 4.57674 4.58794 4.59097 4.64269 4.65348 4.67963 4.68000 4.73160 4.77552 4.83184 4.92302 4.92999 5.00602 5.02230 5.09803 5.12005 5.17525 5.28862 5.32530 5.36854 5.45570 5.51972 5.74807 5.99451 6.17846 6.51218 6.54184 6.57837 6.63825 7.25278 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.365 6.365 3 C 0.471 3.529 4 O -0.536 6.536 5 C -0.108 4.108 6 H 0.148 0.852 7 C -0.119 4.119 8 C 0.127 3.873 9 H 0.113 0.887 10 N -0.710 5.710 11 C 0.517 3.483 12 O -0.575 6.575 13 C -0.101 4.101 14 C -0.061 4.061 15 C -0.096 4.096 16 C -0.117 4.117 17 C 0.100 3.900 18 N -0.402 5.402 19 C 0.015 3.985 20 C -0.082 4.082 21 C -0.201 4.201 22 C -0.202 4.202 23 C -0.045 4.045 24 O -0.551 6.551 25 Si 0.772 3.228 26 C 0.037 3.963 27 C -0.080 4.080 28 C -0.116 4.116 29 C -0.096 4.096 30 C -0.129 4.129 31 H 0.061 0.939 32 H 0.127 0.873 33 H 0.062 0.938 34 H 0.099 0.901 35 H 0.096 0.904 36 H 0.417 0.583 37 H 0.134 0.866 38 H 0.134 0.866 39 H 0.146 0.854 40 H 0.125 0.875 41 H 0.075 0.925 42 H 0.095 0.905 43 H 0.056 0.944 44 H 0.150 0.850 45 H 0.114 0.886 46 H 0.381 0.619 47 H -0.287 1.287 48 H -0.303 1.303 49 H 0.067 0.933 50 H 0.069 0.931 51 H 0.087 0.913 52 H 0.130 0.870 53 H 0.148 0.852 54 H 0.089 0.911 55 H 0.091 0.909 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.441 -1.053 -1.831 6.778 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.281 6.281 3 C 0.315 3.685 4 O -0.426 6.426 5 C -0.127 4.127 6 H 0.166 0.834 7 C -0.157 4.157 8 C 0.021 3.979 9 H 0.131 0.869 10 N -0.362 5.362 11 C 0.305 3.695 12 O -0.454 6.454 13 C -0.140 4.140 14 C -0.061 4.061 15 C -0.115 4.115 16 C -0.136 4.136 17 C 0.011 3.989 18 N -0.077 5.077 19 C -0.094 4.094 20 C -0.139 4.139 21 C -0.224 4.224 22 C -0.209 4.209 23 C -0.155 4.155 24 O -0.359 6.359 25 Si 0.678 3.322 26 C -0.073 4.073 27 C -0.138 4.138 28 C -0.135 4.135 29 C -0.114 4.114 30 C -0.167 4.167 31 H 0.080 0.920 32 H 0.145 0.855 33 H 0.081 0.919 34 H 0.118 0.882 35 H 0.115 0.885 36 H 0.255 0.745 37 H 0.152 0.848 38 H 0.152 0.848 39 H 0.164 0.836 40 H 0.143 0.857 41 H 0.094 0.906 42 H 0.113 0.887 43 H 0.075 0.925 44 H 0.168 0.832 45 H 0.132 0.868 46 H 0.230 0.770 47 H -0.214 1.214 48 H -0.231 1.231 49 H 0.086 0.914 50 H 0.088 0.912 51 H 0.106 0.894 52 H 0.148 0.852 53 H 0.165 0.835 54 H 0.108 0.892 55 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges -5.825 -1.372 -1.682 6.216 hybrid contribution -0.360 1.392 -0.461 1.510 sum -6.185 0.021 -2.143 6.546 Atomic orbital electron populations 1.23526 0.75033 1.05570 1.02487 1.86525 1.24780 1.33298 1.83474 1.24000 0.92514 0.80988 0.70956 1.90666 1.67869 1.37303 1.46737 1.22448 0.85902 1.01846 1.02543 0.83431 1.23328 0.96635 0.94500 1.01236 1.22323 0.97303 0.89852 0.88387 0.86931 1.45888 1.16297 1.37049 1.36982 1.20960 0.81331 0.84335 0.82916 1.90753 1.47749 1.40883 1.66014 1.20799 0.94435 1.00800 0.97982 1.19641 0.95192 0.96110 0.95202 1.21138 0.91053 0.99859 0.99441 1.21196 0.98400 0.97331 0.96689 1.17833 0.83039 0.99675 0.98363 1.41551 1.07526 1.47238 1.11358 1.20755 0.87522 1.04480 0.96636 1.20348 1.02982 1.01807 0.88763 1.20776 0.98738 1.08985 0.93923 1.19666 0.94386 1.09587 0.97255 1.24451 1.05500 0.87707 0.97828 1.86527 1.77506 1.25649 1.46230 0.93840 0.74139 0.88430 0.75770 1.20576 0.94877 1.05129 0.86671 1.20325 0.98500 0.99785 0.95142 1.21233 0.92184 0.99135 1.00976 1.21156 0.96613 0.97198 0.96432 1.23414 0.97708 1.01221 0.94404 0.92009 0.85508 0.91936 0.88233 0.88547 0.74520 0.84773 0.84818 0.83621 0.85668 0.90595 0.88658 0.92466 0.83202 0.86780 0.76999 1.21369 1.23117 0.91429 0.91239 0.89380 0.85184 0.83458 0.89213 0.89011 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.06 10.56 113.37 1.20 1.13 16 2 O -0.36 -0.56 10.57 -51.41 -0.54 -1.10 16 3 C 0.47 0.85 7.49 71.23 0.53 1.38 16 4 O -0.54 -3.96 15.65 21.95 0.34 -3.61 16 5 C -0.11 0.48 4.26 -11.01 -0.05 0.43 16 6 H 0.15 -1.15 8.14 -2.39 -0.02 -1.17 16 7 C -0.12 0.69 7.16 31.12 0.22 0.91 16 8 C 0.13 -0.63 4.24 45.52 0.19 -0.44 16 9 H 0.11 -0.23 7.46 -2.39 -0.02 -0.24 16 10 N -0.71 4.72 5.35 -440.05 -2.36 2.37 16 11 C 0.52 -1.14 7.82 87.66 0.69 -0.45 16 12 O -0.58 -4.36 15.63 -3.04 -0.05 -4.41 16 13 C -0.10 0.81 5.83 29.10 0.17 0.98 16 14 C -0.06 0.10 4.37 -19.85 -0.09 0.02 16 15 C -0.10 0.01 9.69 22.25 0.22 0.23 16 16 C -0.12 -0.37 9.73 22.38 0.22 -0.16 16 17 C 0.10 0.49 4.83 38.08 0.18 0.67 16 18 N -0.40 -2.69 2.79 -320.25 -0.89 -3.59 16 19 C 0.01 0.09 6.81 41.04 0.28 0.37 16 20 C -0.08 -0.19 9.94 71.24 0.71 0.52 16 21 C -0.20 -1.18 9.27 22.16 0.21 -0.97 16 22 C -0.20 -1.25 5.35 -19.98 -0.11 -1.36 16 23 C -0.05 -0.19 2.60 71.24 0.19 -0.01 16 24 O -0.55 -3.80 12.88 -148.98 -1.92 -5.72 16 25 Si 0.77 1.95 30.87 68.60 2.12 4.07 16 26 C 0.04 0.25 6.81 41.04 0.28 0.53 16 27 C -0.08 -0.25 9.87 71.24 0.70 0.45 16 28 C -0.12 -0.31 8.80 22.38 0.20 -0.11 16 29 C -0.10 0.05 9.69 22.25 0.22 0.26 16 30 C -0.13 0.65 7.43 31.12 0.23 0.88 16 31 H 0.06 -0.11 8.14 -2.38 -0.02 -0.13 16 32 H 0.13 -0.95 8.14 -2.39 -0.02 -0.97 16 33 H 0.06 -0.13 8.13 -2.38 -0.02 -0.15 16 34 H 0.10 -0.46 7.41 -2.39 -0.02 -0.47 16 35 H 0.10 -0.68 8.14 -2.38 -0.02 -0.70 16 36 H 0.42 -5.00 8.73 -92.70 -0.81 -5.81 16 37 H 0.13 -1.75 8.09 -2.39 -0.02 -1.77 16 38 H 0.13 -1.73 8.08 -2.39 -0.02 -1.75 16 39 H 0.15 -0.60 8.06 -2.91 -0.02 -0.63 16 40 H 0.13 0.36 8.06 -2.91 -0.02 0.33 16 41 H 0.08 0.07 8.14 -2.39 -0.02 0.05 16 42 H 0.09 -0.06 8.14 -2.39 -0.02 -0.08 16 43 H 0.06 0.24 7.83 -2.39 -0.02 0.22 16 44 H 0.15 0.47 6.53 -2.91 -0.02 0.45 16 45 H 0.11 0.28 7.50 -2.38 -0.02 0.26 16 46 H 0.38 0.85 8.70 -74.06 -0.64 0.21 16 47 H -0.29 -1.88 7.01 99.48 0.70 -1.18 16 48 H -0.30 -2.76 7.11 99.48 0.71 -2.05 16 49 H 0.07 0.26 8.14 -2.38 -0.02 0.24 16 50 H 0.07 0.11 6.86 -2.39 -0.02 0.09 16 51 H 0.09 0.14 7.50 -2.39 -0.02 0.12 16 52 H 0.13 0.23 8.06 -2.91 -0.02 0.21 16 53 H 0.15 -0.70 8.06 -2.91 -0.02 -0.72 16 54 H 0.09 -0.42 8.14 -2.38 -0.02 -0.44 16 55 H 0.09 -0.45 8.10 -2.39 -0.02 -0.47 16 Total: 0.00 -25.83 458.69 2.58 -23.25 By element: Atomic # 1 Polarization: -16.03 SS G_CDS: -0.50 Total: -16.53 kcal Atomic # 6 Polarization: -1.11 SS G_CDS: 6.38 Total: 5.27 kcal Atomic # 7 Polarization: 2.03 SS G_CDS: -3.25 Total: -1.22 kcal Atomic # 8 Polarization: -12.68 SS G_CDS: -2.17 Total: -14.84 kcal Atomic # 14 Polarization: 1.95 SS G_CDS: 2.12 Total: 4.07 kcal Total: -25.83 2.58 -23.25 kcal The number of atoms in the molecule is 55 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10970304_12335864.mol2 55 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -24.116 kcal (2) G-P(sol) polarization free energy of solvation -25.835 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -49.951 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.582 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.253 kcal (6) G-S(sol) free energy of system = (1) + (5) -47.368 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.71 seconds