Wall clock time and date at job start Sat Mar 6 2021 15:34:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45193 * 1 3 3 C 1.34236 * 116.99766 * 2 1 4 4 O 1.20829 * 119.99909 * 0.02562 * 3 2 1 5 5 C 1.50701 * 119.99958 * 179.97438 * 3 2 1 6 6 H 1.08994 * 112.84934 * 48.80590 * 5 3 2 7 7 C 1.53785 * 113.61193 * 180.02562 * 5 3 2 8 8 C 1.53774 * 87.08153 * 140.06371 * 7 5 3 9 9 H 1.09004 * 113.61423 * 89.19912 * 8 7 5 10 10 N 1.46505 * 113.61715 * 220.01584 * 8 7 5 11 11 C 1.34776 * 120.00143 * 205.00408 * 10 8 7 12 12 O 1.21550 * 119.99938 * 359.97438 * 11 10 8 13 13 C 1.47842 * 120.00000 * 180.02562 * 11 10 8 14 14 C 1.39547 * 120.13918 * 359.97438 * 13 11 10 15 15 C 1.38068 * 119.84162 * 180.02562 * 14 13 11 16 16 Br 1.89099 * 119.93764 * 180.02562 * 15 14 13 17 17 C 1.38428 * 120.12467 * 359.97438 * 15 14 13 18 18 C 1.38363 * 120.28398 * 0.02562 * 17 15 14 19 19 C 1.50699 * 119.92148 * 180.02562 * 18 17 15 20 20 O 1.42892 * 109.47249 * 120.00226 * 19 18 17 21 21 Si 1.86298 * 109.47032 * 359.97438 * 19 18 17 22 22 C 1.37947 * 120.15428 * 0.27621 * 18 17 15 23 23 C 1.53781 * 87.08511 * 334.56506 * 8 7 5 24 24 H 1.08997 * 109.47046 * 60.00321 * 1 2 3 25 25 H 1.09001 * 109.46734 * 179.97438 * 1 2 3 26 26 H 1.08995 * 109.47694 * 299.99877 * 1 2 3 27 27 H 1.09003 * 113.61524 * 25.51587 * 7 5 3 28 28 H 1.09003 * 113.61254 * 254.61352 * 7 5 3 29 29 H 0.96992 * 119.99582 * 24.99884 * 10 8 7 30 30 H 1.08001 * 120.07833 * 0.04867 * 14 13 11 31 31 H 1.07999 * 119.85567 * 180.02562 * 17 15 14 32 32 H 1.09004 * 109.46453 * 240.00294 * 19 18 17 33 33 H 0.96703 * 114.00176 * 299.99748 * 20 19 18 34 34 H 1.48506 * 109.99834 * 58.68765 * 21 19 18 35 35 H 1.48502 * 110.00011 * 180.02562 * 21 19 18 36 36 H 1.07990 * 120.05944 * 179.70802 * 22 18 17 37 37 H 1.08997 * 113.61665 * 139.97815 * 23 8 7 38 38 H 1.08994 * 113.61567 * 270.88773 * 23 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4519 0.0000 0.0000 3 6 2.0613 1.1961 0.0000 4 8 1.4032 2.2094 0.0005 5 6 3.5663 1.2750 0.0006 6 1 4.0238 0.6364 -0.7549 7 6 4.1076 2.7144 0.0011 8 6 5.1818 2.2264 0.9873 9 1 6.0818 1.8495 0.5013 10 7 5.4720 3.1819 2.0593 11 6 6.6706 3.1602 2.6752 12 8 7.5107 2.3476 2.3415 13 6 6.9631 4.1241 3.7574 14 6 6.0005 5.0578 4.1432 15 6 6.2805 5.9554 5.1542 16 35 4.9778 7.2215 5.6796 17 6 7.5126 5.9297 5.7847 18 6 8.4708 5.0060 5.4064 19 6 9.8091 4.9849 6.0987 20 8 10.0081 3.7096 6.7118 21 14 9.8552 6.3153 7.4020 22 6 8.2057 4.1079 4.3934 23 6 4.1924 1.1227 1.3969 24 1 -0.3633 0.5138 -0.8900 25 1 -0.3633 -1.0277 -0.0005 26 1 -0.3634 0.5138 0.8899 27 1 3.4175 3.4403 0.4313 28 1 4.5097 3.0300 -0.9616 29 1 4.8014 3.8301 2.3257 30 1 5.0387 5.0781 3.6523 31 1 7.7267 6.6335 6.5753 32 1 10.5986 5.1643 5.3687 33 1 9.3408 3.4831 7.3740 34 1 8.7636 6.1006 8.3857 35 1 11.1703 6.3053 8.0917 36 1 8.9564 3.3908 4.0962 37 1 4.6630 0.1533 1.5610 38 1 3.5256 1.4134 2.2085 There are 56 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 56 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10970304_12335870.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:34:25 Heat of formation + Delta-G solvation = -87.453153 kcal Electronic energy + Delta-G solvation = -24456.341522 eV Core-core repulsion = 20506.023548 eV Total energy + Delta-G solvation = -3950.317973 eV No. of doubly occupied orbitals = 56 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 370.029 amu Computer time = 0.80 seconds Orbital eigenvalues (eV) -42.08072 -41.47535 -40.28348 -39.08356 -37.81669 -37.44603 -34.91694 -33.62279 -32.89605 -30.45989 -29.41367 -27.30034 -26.93184 -26.84582 -25.13826 -22.83403 -22.49345 -21.61570 -20.70169 -19.15886 -18.99784 -18.11409 -17.86579 -17.57537 -17.45344 -17.09053 -16.47069 -16.37029 -16.15620 -15.96772 -15.70945 -15.10828 -14.96077 -14.52991 -14.32496 -14.22984 -14.15235 -13.64419 -13.53822 -13.29892 -13.03733 -13.01799 -12.55548 -12.36824 -12.28711 -11.97613 -11.86346 -11.84722 -11.82348 -11.47996 -11.43094 -11.19733 -10.72458 -10.39121 -10.13197 -9.91030 -4.97114 -0.52397 -0.16526 0.43130 1.04722 1.20846 1.50600 1.55450 1.62380 1.92007 2.05767 2.44827 3.21532 3.25114 3.28167 3.34325 3.45728 3.63575 3.73244 3.80897 3.87022 3.96259 4.01299 4.20641 4.24865 4.27456 4.29316 4.48909 4.55031 4.56710 4.61338 4.67748 4.76014 4.81582 4.91423 4.92530 5.00442 5.09130 5.31485 5.35754 5.42861 6.32537 6.42548 6.63572 6.99656 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.364 6.364 3 C 0.471 3.529 4 O -0.536 6.536 5 C -0.105 4.105 6 H 0.152 0.848 7 C -0.119 4.119 8 C 0.125 3.875 9 H 0.121 0.879 10 N -0.702 5.702 11 C 0.563 3.437 12 O -0.567 6.567 13 C -0.136 4.136 14 C -0.045 4.045 15 C -0.100 4.100 16 Br -0.031 7.031 17 C -0.060 4.060 18 C -0.114 4.114 19 C -0.082 4.082 20 O -0.545 6.545 21 Si 0.760 3.240 22 C -0.027 4.027 23 C -0.130 4.130 24 H 0.062 0.938 25 H 0.127 0.873 26 H 0.061 0.939 27 H 0.099 0.901 28 H 0.101 0.899 29 H 0.414 0.586 30 H 0.159 0.841 31 H 0.156 0.844 32 H 0.132 0.868 33 H 0.388 0.612 34 H -0.275 1.275 35 H -0.297 1.297 36 H 0.134 0.866 37 H 0.093 0.907 38 H 0.090 0.910 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.516 1.936 -0.532 3.219 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.280 6.280 3 C 0.315 3.685 4 O -0.425 6.425 5 C -0.125 4.125 6 H 0.170 0.830 7 C -0.157 4.157 8 C 0.020 3.980 9 H 0.139 0.861 10 N -0.354 5.354 11 C 0.351 3.649 12 O -0.447 6.447 13 C -0.140 4.140 14 C -0.066 4.066 15 C -0.179 4.179 16 Br 0.055 6.945 17 C -0.080 4.080 18 C -0.115 4.115 19 C -0.191 4.191 20 O -0.353 6.353 21 Si 0.664 3.336 22 C -0.047 4.047 23 C -0.169 4.169 24 H 0.080 0.920 25 H 0.145 0.855 26 H 0.080 0.920 27 H 0.117 0.883 28 H 0.120 0.880 29 H 0.252 0.748 30 H 0.177 0.823 31 H 0.173 0.827 32 H 0.150 0.850 33 H 0.237 0.763 34 H -0.201 1.201 35 H -0.225 1.225 36 H 0.152 0.848 37 H 0.112 0.888 38 H 0.109 0.891 Dipole moment (debyes) X Y Z Total from point charges -2.087 2.291 -0.143 3.102 hybrid contribution -0.721 -1.167 0.369 1.420 sum -2.808 1.124 0.226 3.033 Atomic orbital electron populations 1.23521 0.75053 1.05566 1.02478 1.86525 1.24755 1.33253 1.83473 1.23983 0.92494 0.81003 0.70974 1.90668 1.67860 1.37315 1.46704 1.22432 0.85954 1.01714 1.02379 0.83009 1.23347 0.96412 0.94671 1.01277 1.22493 0.97910 0.89643 0.87979 0.86138 1.45801 1.15577 1.37035 1.36957 1.18319 0.82050 0.82949 0.81536 1.90802 1.47724 1.40256 1.65870 1.19876 0.96012 0.98734 0.99404 1.21456 0.99402 0.91566 0.94135 1.21731 0.95536 0.99383 1.01277 1.96864 1.52199 1.54466 1.90961 1.21381 0.91070 0.97181 0.98349 1.20270 0.97020 0.96564 0.97649 1.25273 0.95868 0.93755 1.04165 1.86613 1.55417 1.34713 1.58558 0.94190 0.77270 0.84265 0.77867 1.21270 0.95395 0.96012 0.91975 1.23431 0.97614 1.01232 0.94602 0.91961 0.85506 0.92008 0.88256 0.88028 0.74815 0.82328 0.82669 0.84994 0.76274 1.20063 1.22512 0.84815 0.88793 0.89149 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.05 10.56 113.37 1.20 1.15 16 2 O -0.36 -0.71 10.57 -51.47 -0.54 -1.25 16 3 C 0.47 1.08 7.49 71.24 0.53 1.61 16 4 O -0.54 -4.26 15.65 21.96 0.34 -3.91 16 5 C -0.11 0.42 4.26 -11.01 -0.05 0.37 16 6 H 0.15 -1.20 8.14 -2.39 -0.02 -1.22 16 7 C -0.12 0.59 7.16 31.12 0.22 0.82 16 8 C 0.12 -0.43 4.24 45.51 0.19 -0.24 16 9 H 0.12 -0.18 7.46 -2.38 -0.02 -0.20 16 10 N -0.70 2.03 5.31 -442.91 -2.35 -0.32 16 11 C 0.56 1.71 7.77 86.79 0.67 2.38 16 12 O -0.57 -6.16 15.95 -3.87 -0.06 -6.22 16 13 C -0.14 -0.06 5.87 -20.09 -0.12 -0.17 16 14 C -0.05 0.15 9.28 22.55 0.21 0.36 16 15 C -0.10 0.26 6.22 22.27 0.14 0.40 16 16 Br -0.03 0.08 33.69 -20.37 -0.69 -0.61 16 17 C -0.06 0.20 8.41 22.34 0.19 0.38 16 18 C -0.11 0.19 5.38 -19.90 -0.11 0.09 16 19 C -0.08 0.18 2.82 71.24 0.20 0.38 16 20 O -0.54 -0.78 12.77 -148.98 -1.90 -2.69 16 21 Si 0.76 -2.83 29.78 68.60 2.04 -0.79 16 22 C -0.03 -0.04 9.16 22.53 0.21 0.16 16 23 C -0.13 0.52 7.43 31.12 0.23 0.75 16 24 H 0.06 -0.08 8.13 -2.39 -0.02 -0.10 16 25 H 0.13 -0.89 8.14 -2.39 -0.02 -0.91 16 26 H 0.06 -0.08 8.13 -2.39 -0.02 -0.10 16 27 H 0.10 -0.36 7.41 -2.39 -0.02 -0.38 16 28 H 0.10 -0.69 8.14 -2.39 -0.02 -0.71 16 29 H 0.41 -3.15 6.76 -92.71 -0.63 -3.77 16 30 H 0.16 -1.31 6.40 -2.91 -0.02 -1.33 16 31 H 0.16 -0.99 4.86 -2.91 -0.01 -1.01 16 32 H 0.13 -0.50 7.96 -2.38 -0.02 -0.52 16 33 H 0.39 -1.70 8.70 -74.06 -0.64 -2.34 16 34 H -0.27 0.14 7.11 99.48 0.71 0.85 16 35 H -0.30 -1.25 7.11 99.48 0.71 -0.55 16 36 H 0.13 0.60 7.65 -2.92 -0.02 0.58 16 37 H 0.09 -0.38 8.14 -2.39 -0.02 -0.40 16 38 H 0.09 -0.31 8.10 -2.39 -0.02 -0.33 16 Total: 0.00 -20.24 348.10 0.46 -19.77 By element: Atomic # 1 Polarization: -12.33 SS G_CDS: -0.10 Total: -12.43 kcal Atomic # 6 Polarization: 4.73 SS G_CDS: 3.72 Total: 8.45 kcal Atomic # 7 Polarization: 2.03 SS G_CDS: -2.35 Total: -0.32 kcal Atomic # 8 Polarization: -11.91 SS G_CDS: -2.16 Total: -14.08 kcal Atomic # 14 Polarization: -2.83 SS G_CDS: 2.04 Total: -0.79 kcal Atomic # 35 Polarization: 0.08 SS G_CDS: -0.69 Total: -0.61 kcal Total: -20.24 0.46 -19.77 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10970304_12335870.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -67.679 kcal (2) G-P(sol) polarization free energy of solvation -20.236 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -87.915 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.462 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.774 kcal (6) G-S(sol) free energy of system = (1) + (5) -87.453 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.80 seconds