Wall clock time and date at job start Sat Mar 6 2021 15:34:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 C 1.52996 * 109.47398 * 2 1 4 4 C 1.53005 * 109.47112 * 295.00192 * 3 2 1 5 5 C 1.53000 * 109.47185 * 175.00055 * 3 2 1 6 6 C 1.50700 * 109.47147 * 185.15985 * 5 3 2 7 7 O 1.21286 * 120.00013 * 34.92171 * 6 5 3 8 8 N 1.34777 * 120.00040 * 214.92521 * 6 5 3 9 9 C 1.46504 * 120.00059 * 174.84488 * 8 6 5 10 10 H 1.09005 * 112.84922 * 336.19629 * 9 8 6 11 11 C 1.53784 * 113.61307 * 107.49721 * 9 8 6 12 12 C 1.53780 * 87.07650 * 139.98194 * 11 9 8 13 13 H 1.09002 * 113.69182 * 89.13111 * 12 11 9 14 14 C 1.50705 * 113.61398 * 220.01856 * 12 11 9 15 15 O 1.20823 * 120.00000 * 97.50242 * 14 12 11 16 16 O 1.34226 * 119.99995 * 277.49884 * 14 12 11 17 17 C 1.45203 * 116.99529 * 179.97438 * 16 14 12 18 18 C 1.53773 * 113.61345 * 204.99853 * 9 8 6 19 19 N 1.46498 * 109.47342 * 305.15613 * 5 3 2 20 20 C 1.36337 * 125.63667 * 299.69871 * 19 5 3 21 21 C 1.34859 * 108.21627 * 179.82438 * 20 19 5 22 22 C 1.40889 * 107.41625 * 0.42349 * 21 20 19 23 23 C 1.34853 * 107.41587 * 359.73701 * 22 21 20 24 24 C 1.50702 * 125.88768 * 179.97438 * 23 22 21 25 25 O 1.42896 * 109.47212 * 150.02013 * 24 23 22 26 26 Si 1.86301 * 109.47357 * 30.01526 * 24 23 22 27 27 H 1.09000 * 109.47212 * 179.97438 * 1 2 3 28 28 H 1.08999 * 109.47114 * 300.00030 * 1 2 3 29 29 H 1.09002 * 109.46890 * 59.99528 * 1 2 3 30 30 H 1.08999 * 109.47114 * 239.99970 * 2 1 3 31 31 H 1.08999 * 109.47381 * 120.00361 * 2 1 3 32 32 H 1.08998 * 109.46988 * 54.99966 * 3 2 1 33 33 H 1.08999 * 109.46964 * 55.35464 * 4 3 2 34 34 H 1.09005 * 109.46889 * 175.34985 * 4 3 2 35 35 H 1.08994 * 109.47229 * 295.34931 * 4 3 2 36 36 H 1.08998 * 109.47029 * 65.16366 * 5 3 2 37 37 H 0.96995 * 119.99897 * 354.84450 * 8 6 5 38 38 H 1.09001 * 113.61143 * 25.43890 * 11 9 8 39 39 H 1.08993 * 113.62030 * 254.53126 * 11 9 8 40 40 H 1.09002 * 109.47168 * 60.01001 * 17 16 14 41 41 H 1.09002 * 109.46859 * 180.02562 * 17 16 14 42 42 H 1.08999 * 109.47376 * 300.00003 * 17 16 14 43 43 H 1.09003 * 113.61279 * 105.47570 * 18 9 8 44 44 H 1.08999 * 113.69356 * 334.57855 * 18 9 8 45 45 H 1.07996 * 125.89274 * 0.02562 * 20 19 5 46 46 H 1.08001 * 126.29017 * 180.15592 * 21 20 19 47 47 H 1.07994 * 126.28893 * 179.73290 * 22 21 20 48 48 H 1.09001 * 109.46695 * 270.01982 * 24 23 22 49 49 H 0.96698 * 113.99749 * 300.00005 * 25 24 23 50 50 H 1.48507 * 109.99458 * 58.68511 * 26 24 23 51 51 H 1.48494 * 110.00046 * 179.97438 * 26 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0401 1.4424 0.0000 4 6 1.6353 2.1265 -1.3074 5 6 3.5649 1.4442 0.1257 6 6 4.0568 2.8630 0.2532 7 8 3.3945 3.6828 0.8533 8 7 5.2327 3.2208 -0.2998 9 6 5.6577 4.6226 -0.2743 10 1 4.8226 5.3164 -0.1771 11 6 6.8086 4.8995 0.7074 12 6 7.3925 5.8355 -0.3641 13 1 7.0335 6.8621 -0.2915 14 6 8.8916 5.7474 -0.4906 15 8 9.3858 5.0577 -1.3507 16 8 9.6778 6.4352 0.3523 17 6 11.1125 6.3024 0.1721 18 6 6.6359 4.9902 -1.4024 19 7 3.9579 0.6826 1.3139 20 6 3.5981 0.9708 2.5970 21 6 4.1488 0.0442 3.4074 22 6 4.8831 -0.8430 2.5958 23 6 4.7484 -0.4281 1.3198 24 6 5.3658 -1.0796 0.1092 25 8 4.5260 -0.8662 -1.0270 26 14 5.5470 -2.9088 0.4128 27 1 -0.3633 -1.0277 -0.0005 28 1 -0.3633 0.5138 0.8900 29 1 -0.3633 0.5139 -0.8900 30 1 1.8933 -0.5138 -0.8900 31 1 1.8934 -0.5139 0.8899 32 1 1.6055 1.9815 0.8418 33 1 0.5556 2.0525 -1.4370 34 1 1.9260 3.1765 -1.2731 35 1 2.1359 1.6380 -2.1432 36 1 4.0031 0.9861 -0.7610 37 1 5.7975 2.5502 -0.7146 38 1 7.4293 4.0267 0.9098 39 1 6.4944 5.4162 1.6141 40 1 11.3862 6.6422 -0.8267 41 1 11.6297 6.9077 0.9166 42 1 11.3985 5.2574 0.2916 43 1 6.1822 5.5802 -2.1987 44 1 7.2100 4.1431 -1.7777 45 1 2.9765 1.7966 2.9100 46 1 4.0491 -0.0059 4.4816 47 1 5.4498 -1.6981 2.9336 48 1 6.3472 -0.6434 -0.0773 49 1 3.6348 -1.2290 -0.9310 50 1 4.2196 -3.5098 0.6998 51 1 6.1542 -3.5629 -0.7740 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10970304_12360566.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:34:29 Heat of formation + Delta-G solvation = -77.894016 kcal Electronic energy + Delta-G solvation = -33206.549932 eV Core-core repulsion = 28881.576611 eV Total energy + Delta-G solvation = -4324.973321 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 351.192 amu Computer time = 1.06 seconds Orbital eigenvalues (eV) -42.80117 -41.94860 -40.78997 -39.36333 -38.10341 -37.53591 -37.27139 -34.73393 -33.36661 -31.09139 -30.84902 -29.49500 -27.94169 -26.98877 -26.76739 -26.07294 -25.23356 -22.80885 -22.06124 -21.81407 -20.97142 -20.86087 -20.29897 -19.05192 -18.83273 -18.14775 -17.95973 -17.47289 -17.41676 -16.87985 -16.56414 -16.39628 -16.04339 -15.74922 -15.48699 -15.32774 -15.00297 -14.71514 -14.47073 -14.40439 -14.22223 -14.14392 -14.05461 -13.76559 -13.59328 -13.55055 -13.21143 -13.12759 -13.07425 -13.00764 -12.67880 -12.65636 -12.42330 -12.35672 -12.08393 -11.95069 -11.93032 -11.81308 -11.76296 -11.66404 -11.40874 -11.09802 -10.82038 -10.23648 -9.52040 -8.92439 -4.96752 0.99730 1.02761 1.12840 1.42918 1.59511 1.64612 1.88314 2.00125 2.13774 2.30224 2.97642 3.10051 3.17818 3.38547 3.44359 3.51560 3.61645 3.62102 3.78271 3.91357 3.95515 4.05456 4.13909 4.21372 4.26480 4.31204 4.37102 4.40842 4.42080 4.45764 4.48165 4.48602 4.55823 4.56970 4.65747 4.68072 4.72969 4.74309 4.86802 4.92001 4.93886 4.98929 5.05330 5.22533 5.30011 5.32906 5.35322 5.36672 5.41057 5.96312 6.16664 6.22300 6.33184 6.37936 6.69433 6.97468 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.152 4.152 2 C -0.120 4.120 3 C -0.088 4.088 4 C -0.151 4.151 5 C 0.105 3.895 6 C 0.515 3.485 7 O -0.521 6.521 8 N -0.712 5.712 9 C 0.125 3.875 10 H 0.124 0.876 11 C -0.132 4.132 12 C -0.109 4.109 13 H 0.132 0.868 14 C 0.472 3.528 15 O -0.505 6.505 16 O -0.356 6.356 17 C 0.034 3.966 18 C -0.126 4.126 19 N -0.421 5.421 20 C 0.003 3.997 21 C -0.194 4.194 22 C -0.182 4.182 23 C -0.023 4.023 24 C -0.052 4.052 25 O -0.536 6.536 26 Si 0.711 3.289 27 H 0.057 0.943 28 H 0.057 0.943 29 H 0.059 0.941 30 H 0.060 0.940 31 H 0.069 0.931 32 H 0.091 0.909 33 H 0.071 0.929 34 H 0.059 0.941 35 H 0.059 0.941 36 H 0.141 0.859 37 H 0.405 0.595 38 H 0.091 0.909 39 H 0.090 0.910 40 H 0.064 0.936 41 H 0.104 0.896 42 H 0.064 0.936 43 H 0.089 0.911 44 H 0.103 0.897 45 H 0.162 0.838 46 H 0.139 0.861 47 H 0.145 0.855 48 H 0.120 0.880 49 H 0.376 0.624 50 H -0.256 1.256 51 H -0.256 1.256 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.270 -0.527 0.314 1.410 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.209 4.209 2 C -0.158 4.158 3 C -0.108 4.108 4 C -0.209 4.209 5 C 0.000 4.000 6 C 0.299 3.701 7 O -0.395 6.395 8 N -0.363 5.363 9 C 0.020 3.980 10 H 0.142 0.858 11 C -0.171 4.171 12 C -0.128 4.128 13 H 0.150 0.850 14 C 0.315 3.685 15 O -0.392 6.392 16 O -0.272 6.272 17 C -0.060 4.060 18 C -0.164 4.164 19 N -0.099 5.099 20 C -0.127 4.127 21 C -0.219 4.219 22 C -0.207 4.207 23 C -0.133 4.133 24 C -0.162 4.162 25 O -0.344 6.344 26 Si 0.610 3.390 27 H 0.076 0.924 28 H 0.076 0.924 29 H 0.078 0.922 30 H 0.079 0.921 31 H 0.088 0.912 32 H 0.109 0.891 33 H 0.090 0.910 34 H 0.078 0.922 35 H 0.078 0.922 36 H 0.158 0.842 37 H 0.240 0.760 38 H 0.110 0.890 39 H 0.109 0.891 40 H 0.083 0.917 41 H 0.122 0.878 42 H 0.083 0.917 43 H 0.108 0.892 44 H 0.122 0.878 45 H 0.179 0.821 46 H 0.157 0.843 47 H 0.163 0.837 48 H 0.137 0.863 49 H 0.226 0.774 50 H -0.181 1.181 51 H -0.180 1.180 Dipole moment (debyes) X Y Z Total from point charges 1.163 -0.447 -0.311 1.284 hybrid contribution -0.380 0.269 -0.650 0.800 sum 0.783 -0.178 -0.962 1.253 Atomic orbital electron populations 1.21793 0.94827 1.02032 1.02284 1.21607 0.96919 0.95185 1.02086 1.21369 0.90816 0.97817 1.00752 1.21888 1.02683 1.00618 0.95679 1.22032 0.98113 0.89613 0.90251 1.20672 0.80931 0.90098 0.78440 1.90733 1.56150 1.52711 1.39891 1.45997 1.20974 1.09714 1.59594 1.22482 0.96229 0.83359 0.95949 0.85798 1.23426 0.96937 0.98922 0.97794 1.22309 0.87108 1.02762 1.00656 0.85016 1.23445 0.90444 0.76240 0.78392 1.90684 1.76248 1.38263 1.33992 1.86521 1.20252 1.65060 1.55412 1.23333 0.76250 1.03115 1.03278 1.23382 0.96048 1.00413 0.96594 1.43712 1.39212 1.21407 1.05614 1.21948 1.05579 1.02763 0.82386 1.20889 1.03935 0.97767 0.99262 1.20616 1.05862 1.02970 0.91249 1.20758 1.03006 0.92736 0.96788 1.24776 0.95714 1.12522 0.83165 1.86495 1.27949 1.79931 1.40056 0.94328 0.86002 0.72226 0.86448 0.92437 0.92416 0.92217 0.92129 0.91234 0.89104 0.91037 0.92207 0.92235 0.84202 0.76011 0.89012 0.89131 0.91703 0.87797 0.91744 0.89196 0.87831 0.82107 0.84334 0.83711 0.86269 0.77416 1.18051 1.18024 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.13 9.67 37.16 0.36 0.49 16 2 C -0.12 0.10 4.82 -26.73 -0.13 -0.03 16 3 C -0.09 0.02 1.57 -90.62 -0.14 -0.13 16 4 C -0.15 0.10 8.79 37.16 0.33 0.42 16 5 C 0.11 -0.01 2.00 -69.08 -0.14 -0.15 16 6 C 0.51 0.63 5.90 -10.99 -0.06 0.57 16 7 O -0.52 -2.20 15.61 5.55 0.09 -2.12 16 8 N -0.71 0.51 5.35 -53.01 -0.28 0.22 16 9 C 0.12 -0.14 4.21 -67.12 -0.28 -0.42 16 10 H 0.12 -0.06 7.53 -51.93 -0.39 -0.45 16 11 C -0.13 0.15 7.43 -25.92 -0.19 -0.04 16 12 C -0.11 0.14 4.26 -90.96 -0.39 -0.25 16 13 H 0.13 -0.39 8.14 -51.93 -0.42 -0.81 16 14 C 0.47 0.74 7.48 36.01 0.27 1.01 16 15 O -0.50 -2.12 15.65 -18.75 -0.29 -2.41 16 16 O -0.36 -0.48 10.57 -39.25 -0.41 -0.90 16 17 C 0.03 -0.02 10.56 101.05 1.07 1.04 16 18 C -0.13 0.22 7.16 -25.92 -0.19 0.03 16 19 N -0.42 -0.23 1.57 -106.71 -0.17 -0.40 16 20 C 0.00 0.00 10.47 -16.75 -0.18 -0.17 16 21 C -0.19 -0.25 10.86 -39.78 -0.43 -0.69 16 22 C -0.18 -0.07 9.43 -39.78 -0.38 -0.44 16 23 C -0.02 0.00 6.15 -81.79 -0.50 -0.51 16 24 C -0.05 0.07 2.96 36.01 0.11 0.17 16 25 O -0.54 0.46 9.85 -35.23 -0.35 0.12 16 26 Si 0.71 -1.07 31.14 -169.99 -5.29 -6.37 16 27 H 0.06 -0.05 8.14 -51.93 -0.42 -0.47 16 28 H 0.06 -0.02 8.14 -51.93 -0.42 -0.44 16 29 H 0.06 -0.07 6.47 -51.93 -0.34 -0.40 16 30 H 0.06 -0.11 6.45 -51.93 -0.34 -0.45 16 31 H 0.07 0.03 7.18 -51.93 -0.37 -0.34 16 32 H 0.09 0.14 7.60 -51.93 -0.39 -0.25 16 33 H 0.07 -0.07 6.36 -51.93 -0.33 -0.40 16 34 H 0.06 0.04 7.37 -51.93 -0.38 -0.35 16 35 H 0.06 -0.08 8.14 -51.93 -0.42 -0.50 16 36 H 0.14 -0.12 5.18 -51.93 -0.27 -0.39 16 37 H 0.40 -0.83 8.73 -40.82 -0.36 -1.19 16 38 H 0.09 -0.05 8.09 -51.93 -0.42 -0.47 16 39 H 0.09 -0.10 8.14 -51.93 -0.42 -0.52 16 40 H 0.06 -0.04 8.13 -51.93 -0.42 -0.46 16 41 H 0.10 -0.30 8.14 -51.93 -0.42 -0.73 16 42 H 0.06 -0.04 8.13 -51.93 -0.42 -0.46 16 43 H 0.09 -0.23 8.14 -51.93 -0.42 -0.65 16 44 H 0.10 -0.09 7.41 -51.93 -0.38 -0.47 16 45 H 0.16 0.29 8.06 -52.49 -0.42 -0.14 16 46 H 0.14 0.03 8.06 -52.49 -0.42 -0.39 16 47 H 0.15 -0.27 6.89 -52.49 -0.36 -0.63 16 48 H 0.12 -0.27 7.96 -51.93 -0.41 -0.68 16 49 H 0.38 -0.78 6.44 45.56 0.29 -0.48 16 50 H -0.26 -0.29 7.11 56.52 0.40 0.11 16 51 H -0.26 -0.35 7.11 56.52 0.40 0.05 16 LS Contribution 406.70 15.07 6.13 6.13 Total: 0.00 -7.43 406.70 -9.76 -17.20 By element: Atomic # 1 Polarization: -4.07 SS G_CDS: -8.30 Total: -12.37 kcal Atomic # 6 Polarization: 1.78 SS G_CDS: -0.88 Total: 0.91 kcal Atomic # 7 Polarization: 0.27 SS G_CDS: -0.45 Total: -0.18 kcal Atomic # 8 Polarization: -4.34 SS G_CDS: -0.97 Total: -5.31 kcal Atomic # 14 Polarization: -1.07 SS G_CDS: -5.29 Total: -6.37 kcal Total LS contribution 6.13 Total: 6.13 kcal Total: -7.43 -9.76 -17.20 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10970304_12360566.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -60.698 kcal (2) G-P(sol) polarization free energy of solvation -7.431 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -68.129 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.765 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.196 kcal (6) G-S(sol) free energy of system = (1) + (5) -77.894 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.06 seconds