Wall clock time and date at job start Sat Mar 6 2021 15:34:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45198 * 1 3 3 C 1.34231 * 116.99983 * 2 1 4 4 O 1.20822 * 120.00142 * 0.02562 * 3 2 1 5 5 C 1.50698 * 120.00053 * 180.02562 * 3 2 1 6 6 H 1.09006 * 112.84935 * 311.19443 * 5 3 2 7 7 C 1.53777 * 113.61732 * 82.50319 * 5 3 2 8 8 C 1.53781 * 87.08387 * 139.98090 * 7 5 3 9 9 H 1.09002 * 113.61444 * 89.11389 * 8 7 5 10 10 N 1.46494 * 113.61808 * 220.02164 * 8 7 5 11 11 C 1.34774 * 120.00207 * 252.49899 * 10 8 7 12 12 O 1.21707 * 119.99909 * 359.97438 * 11 10 8 13 13 C 1.46423 * 120.00300 * 179.97438 * 11 10 8 14 14 C 1.34817 * 120.00143 * 179.97438 * 13 11 10 15 15 C 1.47206 * 120.00186 * 180.02562 * 14 13 11 16 16 C 1.39838 * 120.16701 * 359.71851 * 15 14 13 17 17 C 1.37890 * 119.82338 * 179.76742 * 16 15 14 18 18 C 1.38401 * 120.17362 * 0.49231 * 17 16 15 19 19 C 1.50701 * 119.82875 * 179.76302 * 18 17 16 20 20 O 1.42906 * 109.46883 * 120.02351 * 19 18 17 21 21 Si 1.86292 * 109.47338 * 0.02562 * 19 18 17 22 22 C 1.38403 * 120.34224 * 359.78576 * 18 17 16 23 23 C 1.37892 * 120.17020 * 359.95103 * 22 18 17 24 24 C 1.53778 * 113.61647 * 180.02562 * 5 3 2 25 25 H 1.09002 * 109.47379 * 59.99613 * 1 2 3 26 26 H 1.09001 * 109.46782 * 299.99696 * 1 2 3 27 27 H 1.09004 * 109.47085 * 179.97438 * 1 2 3 28 28 H 1.09003 * 113.61478 * 254.53049 * 7 5 3 29 29 H 1.09004 * 113.61370 * 25.43532 * 7 5 3 30 30 H 0.97003 * 120.00490 * 72.49491 * 10 8 7 31 31 H 1.07996 * 120.00167 * 359.97438 * 13 11 10 32 32 H 1.08002 * 119.99919 * 359.97438 * 14 13 11 33 33 H 1.08006 * 120.08787 * 0.02562 * 16 15 14 34 34 H 1.08010 * 119.91550 * 180.25716 * 17 16 15 35 35 H 1.08999 * 109.47069 * 240.01710 * 19 18 17 36 36 H 0.96695 * 113.99589 * 179.97438 * 20 19 18 37 37 H 1.48505 * 109.99793 * 298.68039 * 21 19 18 38 38 H 1.48494 * 110.00404 * 59.99656 * 21 19 18 39 39 H 1.08001 * 119.91328 * 179.97438 * 22 18 17 40 40 H 1.07996 * 120.08388 * 180.02562 * 23 22 18 41 41 H 1.09003 * 113.61629 * 334.56623 * 24 5 3 42 42 H 1.09005 * 113.61754 * 105.38297 * 24 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2749 -0.0006 6 1 4.0239 0.6362 0.7550 7 6 4.1906 1.1239 -1.3978 8 6 5.1807 2.2271 -0.9886 9 1 6.0806 1.8483 -0.5041 10 7 5.4693 3.1836 -2.0600 11 6 6.6670 3.1624 -2.6776 12 8 7.5090 2.3490 -2.3449 13 6 6.9553 4.1181 -3.7489 14 6 8.1536 4.0972 -4.3663 15 6 8.4437 5.0584 -5.4430 16 6 7.4767 5.9907 -5.8320 17 6 7.7577 6.8908 -6.8381 18 6 8.9892 6.8666 -7.4692 19 6 9.2861 7.8505 -8.5714 20 8 10.4128 8.6498 -8.2056 21 14 7.8057 8.9495 -8.8383 22 6 9.9493 5.9431 -7.0937 23 6 9.6853 5.0400 -6.0857 24 6 4.1077 2.7142 0.0001 25 1 -0.3634 0.5139 -0.8899 26 1 -0.3633 0.5138 0.8900 27 1 -0.3633 -1.0277 -0.0005 28 1 4.6609 0.1546 -1.5634 29 1 3.5226 1.4154 -2.2083 30 1 4.7984 3.8321 -2.3250 31 1 6.2081 4.8396 -4.0444 32 1 8.9010 3.3759 -4.0706 33 1 6.5139 6.0083 -5.3430 34 1 7.0135 7.6143 -7.1369 35 1 9.5078 7.3096 -9.4914 36 1 10.6615 9.3066 -8.8703 37 1 6.6352 8.1335 -9.2501 38 1 7.4932 9.6925 -7.5912 39 1 10.9078 5.9301 -7.5912 40 1 10.4356 4.3203 -5.7936 41 1 3.4171 3.4408 -0.4280 42 1 4.5099 3.0290 0.9631 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10970304_12360594.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:34:32 Heat of formation + Delta-G solvation = -78.336193 kcal Electronic energy + Delta-G solvation = -24694.601304 eV Core-core repulsion = 20800.732915 eV Total energy + Delta-G solvation = -3893.868389 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 318.135 amu Computer time = 0.77 seconds Orbital eigenvalues (eV) -41.96425 -40.91996 -40.52280 -39.16238 -37.78783 -37.32849 -35.17160 -34.52022 -32.33444 -31.40645 -29.44312 -27.64641 -26.94391 -26.55401 -24.26246 -23.96219 -22.46717 -21.81489 -21.05868 -20.18161 -18.96759 -18.67916 -18.45168 -17.94580 -17.46644 -17.34664 -16.85399 -16.53990 -16.35751 -16.06931 -15.76451 -15.37063 -15.24498 -14.93289 -14.49695 -14.39925 -14.22657 -14.02995 -13.82365 -13.71834 -13.62299 -13.54619 -13.06563 -13.00291 -12.60026 -12.37060 -12.34227 -12.04829 -11.95346 -11.88597 -11.80747 -11.38609 -11.36018 -10.93137 -10.40185 -10.12944 -10.07553 -9.29731 -5.03974 -0.60150 0.29045 0.85531 1.13158 1.20586 1.56986 1.62755 1.89659 2.20509 2.23314 2.71648 3.15359 3.23393 3.27380 3.50137 3.57667 3.63622 3.67273 3.73901 3.81625 3.94311 4.08776 4.11322 4.14213 4.20965 4.21623 4.27543 4.39975 4.45676 4.46359 4.52723 4.57351 4.70623 4.72877 4.78332 4.87155 4.98101 5.02745 5.06380 5.29381 5.35592 5.39107 5.45784 5.53134 5.79157 6.45465 6.53514 6.70722 7.20128 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.357 6.357 3 C 0.472 3.528 4 O -0.505 6.505 5 C -0.109 4.109 6 H 0.132 0.868 7 C -0.134 4.134 8 C 0.126 3.874 9 H 0.125 0.875 10 N -0.716 5.716 11 C 0.551 3.449 12 O -0.541 6.541 13 C -0.217 4.217 14 C -0.012 4.012 15 C -0.075 4.075 16 C -0.093 4.093 17 C -0.126 4.126 18 C -0.062 4.062 19 C -0.075 4.075 20 O -0.545 6.545 21 Si 0.684 3.316 22 C -0.091 4.091 23 C -0.090 4.090 24 C -0.127 4.127 25 H 0.063 0.937 26 H 0.064 0.936 27 H 0.104 0.896 28 H 0.090 0.910 29 H 0.091 0.909 30 H 0.404 0.596 31 H 0.130 0.870 32 H 0.140 0.860 33 H 0.132 0.868 34 H 0.121 0.879 35 H 0.077 0.923 36 H 0.384 0.616 37 H -0.255 1.255 38 H -0.250 1.250 39 H 0.133 0.867 40 H 0.134 0.866 41 H 0.103 0.897 42 H 0.089 0.911 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.802 1.604 -3.777 4.181 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.273 6.273 3 C 0.315 3.685 4 O -0.393 6.393 5 C -0.129 4.129 6 H 0.150 0.850 7 C -0.173 4.173 8 C 0.020 3.980 9 H 0.143 0.857 10 N -0.367 5.367 11 C 0.341 3.659 12 O -0.420 6.420 13 C -0.238 4.238 14 C -0.031 4.031 15 C -0.075 4.075 16 C -0.111 4.111 17 C -0.144 4.144 18 C -0.063 4.063 19 C -0.186 4.186 20 O -0.351 6.351 21 Si 0.585 3.415 22 C -0.109 4.109 23 C -0.108 4.108 24 C -0.165 4.165 25 H 0.082 0.918 26 H 0.083 0.917 27 H 0.122 0.878 28 H 0.109 0.891 29 H 0.110 0.890 30 H 0.239 0.761 31 H 0.147 0.853 32 H 0.157 0.843 33 H 0.149 0.851 34 H 0.138 0.862 35 H 0.095 0.905 36 H 0.231 0.769 37 H -0.180 1.180 38 H -0.175 1.175 39 H 0.151 0.849 40 H 0.152 0.848 41 H 0.121 0.879 42 H 0.108 0.892 Dipole moment (debyes) X Y Z Total from point charges -1.300 1.133 -2.746 3.243 hybrid contribution -0.548 -0.145 0.093 0.574 sum -1.848 0.989 -2.653 3.381 Atomic orbital electron populations 1.23330 0.75913 1.04054 1.02696 1.86522 1.23742 1.33267 1.83753 1.23481 0.91583 0.81425 0.72025 1.90681 1.66997 1.36442 1.45154 1.22317 0.87685 1.01038 1.01843 0.85003 1.23457 0.97992 1.01275 0.94557 1.22435 0.97817 0.89577 0.88130 0.85705 1.45816 1.16424 1.36946 1.37471 1.18354 0.81674 0.83827 0.82087 1.90837 1.46413 1.39402 1.65351 1.22885 0.99374 1.01939 0.99587 1.22411 0.96286 0.94032 0.90420 1.19050 0.94721 0.96701 0.97000 1.21303 0.99110 0.94318 0.96394 1.20809 0.96605 0.99661 0.97308 1.19545 0.94130 0.96021 0.96564 1.24727 0.99490 0.96969 0.97367 1.86489 1.48532 1.52198 1.47920 0.95247 0.76282 0.84043 0.85927 1.20981 0.99078 0.93987 0.96870 1.21477 0.95891 0.98325 0.95085 1.23392 0.97177 0.94915 1.01020 0.91791 0.91701 0.87798 0.89126 0.89045 0.76102 0.85257 0.84267 0.85071 0.86154 0.90502 0.76864 1.17954 1.17469 0.84918 0.84771 0.87906 0.89240 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.56 101.05 1.07 1.05 16 2 O -0.36 -0.54 10.57 -39.26 -0.41 -0.95 16 3 C 0.47 0.82 7.48 36.00 0.27 1.08 16 4 O -0.51 -2.21 15.65 -18.75 -0.29 -2.50 16 5 C -0.11 0.11 4.26 -90.96 -0.39 -0.27 16 6 H 0.13 -0.36 8.14 -51.93 -0.42 -0.78 16 7 C -0.13 0.15 7.43 -25.92 -0.19 -0.05 16 8 C 0.13 -0.09 4.24 -67.10 -0.28 -0.38 16 9 H 0.13 0.03 7.46 -51.93 -0.39 -0.36 16 10 N -0.72 0.38 5.35 -54.39 -0.29 0.09 16 11 C 0.55 1.13 7.74 -12.97 -0.10 1.03 16 12 O -0.54 -3.11 15.83 5.18 0.08 -3.03 16 13 C -0.22 -0.07 9.41 -37.50 -0.35 -0.42 16 14 C -0.01 -0.01 9.46 -37.15 -0.35 -0.36 16 15 C -0.07 -0.09 5.87 -105.06 -0.62 -0.71 16 16 C -0.09 -0.10 9.41 -39.11 -0.37 -0.46 16 17 C -0.13 -0.23 8.65 -39.65 -0.34 -0.57 16 18 C -0.06 -0.11 5.43 -104.50 -0.57 -0.68 16 19 C -0.07 0.04 2.81 36.01 0.10 0.14 16 20 O -0.55 0.10 12.74 -35.23 -0.45 -0.35 16 21 Si 0.68 -0.97 29.77 -169.99 -5.06 -6.03 16 22 C -0.09 -0.13 9.59 -39.65 -0.38 -0.51 16 23 C -0.09 -0.09 9.80 -39.11 -0.38 -0.47 16 24 C -0.13 0.18 7.16 -25.90 -0.19 -0.01 16 25 H 0.06 -0.03 8.13 -51.93 -0.42 -0.45 16 26 H 0.06 -0.03 8.13 -51.93 -0.42 -0.45 16 27 H 0.10 -0.29 8.14 -51.93 -0.42 -0.72 16 28 H 0.09 -0.11 8.14 -51.93 -0.42 -0.53 16 29 H 0.09 -0.08 8.09 -51.93 -0.42 -0.50 16 30 H 0.40 -1.15 8.71 -40.82 -0.36 -1.50 16 31 H 0.13 -0.28 6.07 -52.49 -0.32 -0.59 16 32 H 0.14 0.18 7.52 -52.49 -0.39 -0.22 16 33 H 0.13 -0.16 6.17 -52.48 -0.32 -0.49 16 34 H 0.12 0.13 4.86 -52.48 -0.25 -0.12 16 35 H 0.08 -0.16 7.96 -51.93 -0.41 -0.58 16 36 H 0.38 -1.99 8.74 45.56 0.40 -1.60 16 37 H -0.25 -0.23 7.11 56.52 0.40 0.17 16 38 H -0.25 -0.45 7.11 56.52 0.40 -0.05 16 39 H 0.13 0.02 8.06 -52.49 -0.42 -0.40 16 40 H 0.13 -0.13 8.06 -52.49 -0.42 -0.55 16 41 H 0.10 -0.08 7.41 -51.93 -0.38 -0.46 16 42 H 0.09 -0.18 8.14 -51.93 -0.42 -0.61 16 LS Contribution 361.36 15.07 5.45 5.45 Total: 0.00 -10.22 361.36 -9.49 -19.71 By element: Atomic # 1 Polarization: -5.35 SS G_CDS: -5.43 Total: -10.79 kcal Atomic # 6 Polarization: 1.48 SS G_CDS: -3.08 Total: -1.60 kcal Atomic # 7 Polarization: 0.38 SS G_CDS: -0.29 Total: 0.09 kcal Atomic # 8 Polarization: -5.76 SS G_CDS: -1.07 Total: -6.83 kcal Atomic # 14 Polarization: -0.97 SS G_CDS: -5.06 Total: -6.03 kcal Total LS contribution 5.45 Total: 5.45 kcal Total: -10.22 -9.49 -19.71 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10970304_12360594.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -58.622 kcal (2) G-P(sol) polarization free energy of solvation -10.223 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -68.845 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.491 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.714 kcal (6) G-S(sol) free energy of system = (1) + (5) -78.336 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.77 seconds