Wall clock time and date at job start Sat Mar 6 2021 15:34:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45198 * 1 3 3 C 1.34228 * 116.99985 * 2 1 4 4 O 1.20826 * 120.00319 * 359.97438 * 3 2 1 5 5 C 1.50706 * 120.00394 * 179.97438 * 3 2 1 6 6 H 1.09007 * 112.84361 * 48.80960 * 5 3 2 7 7 C 1.53782 * 113.61744 * 179.97438 * 5 3 2 8 8 C 1.53782 * 87.07935 * 139.98512 * 7 5 3 9 9 H 1.08993 * 113.61185 * 89.11441 * 8 7 5 10 10 N 1.46499 * 113.61044 * 220.02056 * 8 7 5 11 11 C 1.34779 * 119.99648 * 204.99771 * 10 8 7 12 12 O 1.21571 * 119.99938 * 0.02562 * 11 10 8 13 13 C 1.47694 * 119.99899 * 180.02562 * 11 10 8 14 14 C 1.39809 * 120.15185 * 179.72610 * 13 11 10 15 15 F 1.35097 * 120.08431 * 359.97438 * 14 13 11 16 16 C 1.38319 * 119.82735 * 179.74559 * 14 13 11 17 17 C 1.38190 * 120.14492 * 0.55385 * 16 14 13 18 18 C 1.50694 * 119.84109 * 179.71860 * 17 16 14 19 19 O 1.42900 * 109.47499 * 254.97819 * 18 17 16 20 20 Si 1.86308 * 109.47074 * 14.98168 * 18 17 16 21 21 C 1.38657 * 120.31234 * 359.69878 * 17 16 14 22 22 F 1.35105 * 119.91140 * 180.02562 * 21 17 16 23 23 C 1.38062 * 120.17054 * 0.02562 * 21 17 16 24 24 C 1.53770 * 113.61615 * 277.50201 * 5 3 2 25 25 H 1.09002 * 109.47379 * 299.99940 * 1 2 3 26 26 H 1.09001 * 109.46782 * 180.02562 * 1 2 3 27 27 H 1.09004 * 109.47085 * 60.00143 * 1 2 3 28 28 H 1.08995 * 113.61390 * 254.53491 * 7 5 3 29 29 H 1.09001 * 113.61232 * 25.34809 * 7 5 3 30 30 H 0.96997 * 120.00239 * 24.99949 * 10 8 7 31 31 H 1.07996 * 119.92512 * 180.27592 * 16 14 13 32 32 H 1.09002 * 109.47108 * 134.98009 * 18 17 16 33 33 H 0.96705 * 113.99331 * 60.00049 * 19 18 17 34 34 H 1.48495 * 110.00175 * 58.67763 * 20 18 17 35 35 H 1.48505 * 109.99867 * 179.97438 * 20 18 17 36 36 H 1.07997 * 120.07537 * 179.97438 * 23 21 17 37 37 H 1.09003 * 113.61809 * 334.56242 * 24 5 3 38 38 H 1.09001 * 113.61801 * 105.46465 * 24 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2094 -0.0005 5 6 3.5663 1.2750 0.0006 6 1 4.0239 0.6363 -0.7551 7 6 4.1078 2.7143 -0.0001 8 6 5.1807 2.2275 0.9882 9 1 6.0806 1.8486 0.5038 10 7 5.4693 3.1844 2.0592 11 6 6.6670 3.1635 2.6769 12 8 7.5080 2.3508 2.3448 13 6 6.9578 4.1278 3.7571 14 6 8.1971 4.1052 4.4038 15 9 9.1330 3.2003 4.0428 16 6 8.4642 5.0149 5.4110 17 6 7.5054 5.9367 5.7858 18 6 7.8014 6.9205 6.8883 19 8 7.1099 6.5278 8.0756 20 14 9.6348 6.9500 7.2185 21 6 6.2724 5.9610 5.1520 22 9 5.3411 6.8660 5.5246 23 6 5.9940 5.0627 4.1412 24 6 4.1906 1.1238 1.3977 25 1 -0.3634 0.5138 0.8900 26 1 -0.3633 -1.0277 0.0005 27 1 -0.3633 0.5138 -0.8900 28 1 4.5111 3.0286 -0.9627 29 1 3.4165 3.4410 0.4267 30 1 4.7984 3.8330 2.3239 31 1 9.4226 5.0017 5.9086 32 1 7.4704 7.9143 6.5869 33 1 7.3552 5.6512 8.4019 34 1 10.3674 7.3261 5.9828 35 1 9.9399 7.9170 8.3035 36 1 5.0330 5.0827 3.6489 37 1 3.5227 1.4153 2.2083 38 1 4.6609 0.1546 1.5634 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10970304_12360598.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:34:33 Heat of formation + Delta-G solvation = -177.161600 kcal Electronic energy + Delta-G solvation = -27433.899529 eV Core-core repulsion = 22880.601557 eV Total energy + Delta-G solvation = -4553.297972 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 328.100 amu Computer time = 0.77 seconds Orbital eigenvalues (eV) -50.12920 -50.08855 -42.05863 -41.28780 -40.13121 -39.10631 -37.64203 -37.44279 -34.94055 -33.12034 -31.38113 -29.45989 -28.07530 -26.84675 -26.66647 -24.40653 -24.01584 -22.53382 -21.83088 -20.86575 -19.56516 -19.08901 -18.75825 -18.52093 -17.92602 -17.91540 -17.45310 -17.36119 -17.01396 -16.59545 -16.41330 -16.24659 -16.06468 -15.88942 -15.80209 -15.53000 -15.19714 -14.76813 -14.47136 -14.27567 -14.18498 -13.83093 -13.66877 -13.55653 -13.16600 -13.04373 -12.98949 -12.55398 -12.40005 -12.30684 -12.17208 -11.86434 -11.83492 -11.45005 -11.22472 -10.61962 -10.59433 -10.22770 -9.83405 -5.05315 -0.82448 -0.31761 1.04718 1.15825 1.36906 1.59769 1.62322 1.93872 1.96556 2.21995 2.78002 2.83718 3.11138 3.21227 3.27033 3.31793 3.50180 3.54303 3.63243 3.73563 3.80014 4.01012 4.14937 4.25078 4.27660 4.30955 4.32375 4.45491 4.54741 4.57198 4.61375 4.68001 4.68530 4.71433 4.82126 4.91640 5.00648 5.31451 5.36017 5.40463 6.26979 6.63571 6.68012 6.94613 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.364 6.364 3 C 0.471 3.529 4 O -0.537 6.537 5 C -0.106 4.106 6 H 0.153 0.847 7 C -0.120 4.120 8 C 0.125 3.875 9 H 0.122 0.878 10 N -0.700 5.700 11 C 0.561 3.439 12 O -0.554 6.554 13 C -0.149 4.149 14 C 0.144 3.856 15 F -0.120 7.120 16 C -0.120 4.120 17 C -0.096 4.096 18 C -0.079 4.079 19 O -0.547 6.547 20 Si 0.782 3.218 21 C 0.098 3.902 22 F -0.131 7.131 23 C -0.080 4.080 24 C -0.129 4.129 25 H 0.061 0.939 26 H 0.127 0.873 27 H 0.061 0.939 28 H 0.100 0.900 29 H 0.099 0.901 30 H 0.415 0.585 31 H 0.182 0.818 32 H 0.113 0.887 33 H 0.399 0.601 34 H -0.279 1.279 35 H -0.291 1.291 36 H 0.176 0.824 37 H 0.091 0.909 38 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.726 -2.203 0.719 2.428 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.280 6.280 3 C 0.315 3.685 4 O -0.427 6.427 5 C -0.125 4.125 6 H 0.170 0.830 7 C -0.158 4.158 8 C 0.020 3.980 9 H 0.140 0.860 10 N -0.352 5.352 11 C 0.349 3.651 12 O -0.433 6.433 13 C -0.154 4.154 14 C 0.123 3.877 15 F -0.098 7.098 16 C -0.138 4.138 17 C -0.098 4.098 18 C -0.188 4.188 19 O -0.355 6.355 20 Si 0.685 3.315 21 C 0.078 3.922 22 F -0.110 7.110 23 C -0.099 4.099 24 C -0.168 4.168 25 H 0.080 0.920 26 H 0.145 0.855 27 H 0.080 0.920 28 H 0.119 0.881 29 H 0.117 0.883 30 H 0.253 0.747 31 H 0.199 0.801 32 H 0.130 0.870 33 H 0.250 0.750 34 H -0.206 1.206 35 H -0.219 1.219 36 H 0.194 0.806 37 H 0.110 0.890 38 H 0.114 0.886 Dipole moment (debyes) X Y Z Total from point charges 0.060 -1.451 0.402 1.507 hybrid contribution -1.316 0.703 -0.289 1.520 sum -1.255 -0.748 0.113 1.466 Atomic orbital electron populations 1.23525 0.75054 1.05582 1.02458 1.86523 1.24745 1.33234 1.83456 1.23993 0.92515 0.80996 0.70949 1.90669 1.67894 1.37339 1.46752 1.22434 0.85927 1.01668 1.02461 0.82982 1.23350 0.96446 0.94739 1.01255 1.22513 0.97983 0.89590 0.87876 0.86048 1.45761 1.15404 1.37029 1.36959 1.18044 0.82487 0.82999 0.81602 1.90871 1.47328 1.39711 1.65395 1.19837 0.94815 1.00290 1.00432 1.17770 0.85881 0.88948 0.95086 1.91617 1.63139 1.64614 1.90443 1.21005 1.01275 0.94176 0.97312 1.20577 0.92591 0.98097 0.98533 1.25294 1.11686 0.97809 0.84040 1.86559 1.67944 1.41153 1.39848 0.93792 0.70944 0.88123 0.78621 1.17423 0.87181 0.90726 0.96878 1.91565 1.63956 1.64904 1.90543 1.21322 1.00479 0.92404 0.95673 1.23439 0.97561 1.01253 0.94541 0.92010 0.85472 0.92001 0.88097 0.88259 0.74698 0.80080 0.86964 0.75006 1.20583 1.21870 0.80650 0.89040 0.88631 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.05 10.56 113.37 1.20 1.14 16 2 O -0.36 -0.62 10.57 -51.40 -0.54 -1.16 16 3 C 0.47 0.96 7.48 71.24 0.53 1.49 16 4 O -0.54 -4.20 15.65 21.96 0.34 -3.85 16 5 C -0.11 0.46 4.26 -11.01 -0.05 0.41 16 6 H 0.15 -1.26 8.14 -2.38 -0.02 -1.28 16 7 C -0.12 0.64 7.16 31.12 0.22 0.86 16 8 C 0.13 -0.50 4.24 45.53 0.19 -0.31 16 9 H 0.12 -0.24 7.46 -2.39 -0.02 -0.26 16 10 N -0.70 2.49 5.31 -442.99 -2.35 0.14 16 11 C 0.56 1.51 7.77 86.74 0.67 2.18 16 12 O -0.55 -5.97 14.94 -3.94 -0.06 -6.03 16 13 C -0.15 0.02 5.88 -20.06 -0.12 -0.10 16 14 C 0.14 0.14 7.28 22.67 0.17 0.31 16 15 F -0.12 -0.75 15.55 44.97 0.70 -0.05 16 16 C -0.12 0.49 8.62 22.28 0.19 0.68 16 17 C -0.10 0.29 5.27 -19.78 -0.10 0.19 16 18 C -0.08 0.25 2.44 71.23 0.17 0.42 16 19 O -0.55 1.22 12.88 -148.98 -1.92 -0.70 16 20 Si 0.78 -4.05 29.90 68.60 2.05 -2.00 16 21 C 0.10 -0.13 7.23 22.33 0.16 0.03 16 22 F -0.13 -0.28 16.73 44.97 0.75 0.47 16 23 C -0.08 0.32 9.51 22.57 0.21 0.54 16 24 C -0.13 0.60 7.43 31.13 0.23 0.83 16 25 H 0.06 -0.09 8.13 -2.39 -0.02 -0.11 16 26 H 0.13 -0.91 8.14 -2.39 -0.02 -0.93 16 27 H 0.06 -0.08 8.13 -2.38 -0.02 -0.10 16 28 H 0.10 -0.70 8.14 -2.39 -0.02 -0.72 16 29 H 0.10 -0.39 7.41 -2.39 -0.02 -0.41 16 30 H 0.41 -3.58 6.76 -92.71 -0.63 -4.21 16 31 H 0.18 -1.75 5.10 -2.91 -0.01 -1.77 16 32 H 0.11 -0.14 7.89 -2.39 -0.02 -0.16 16 33 H 0.40 -4.48 8.70 -74.05 -0.64 -5.12 16 34 H -0.28 0.07 7.11 99.48 0.71 0.78 16 35 H -0.29 -0.72 7.11 99.48 0.71 -0.01 16 36 H 0.18 -1.74 6.40 -2.91 -0.02 -1.76 16 37 H 0.09 -0.38 8.09 -2.39 -0.02 -0.40 16 38 H 0.10 -0.46 8.14 -2.39 -0.02 -0.48 16 Total: 0.00 -24.06 337.53 2.58 -21.47 By element: Atomic # 1 Polarization: -16.88 SS G_CDS: -0.08 Total: -16.96 kcal Atomic # 6 Polarization: 4.98 SS G_CDS: 3.69 Total: 8.67 kcal Atomic # 7 Polarization: 2.49 SS G_CDS: -2.35 Total: 0.14 kcal Atomic # 8 Polarization: -9.57 SS G_CDS: -2.18 Total: -11.75 kcal Atomic # 9 Polarization: -1.03 SS G_CDS: 1.45 Total: 0.42 kcal Atomic # 14 Polarization: -4.05 SS G_CDS: 2.05 Total: -2.00 kcal Total: -24.06 2.58 -21.47 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10970304_12360598.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -155.687 kcal (2) G-P(sol) polarization free energy of solvation -24.058 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -179.745 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.583 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.474 kcal (6) G-S(sol) free energy of system = (1) + (5) -177.162 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.77 seconds