Wall clock time and date at job start Sat Mar 6 2021 15:34:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45201 * 1 3 3 C 1.34228 * 116.99632 * 2 1 4 4 O 1.20824 * 120.00311 * 0.02562 * 3 2 1 5 5 C 1.50697 * 120.00134 * 180.02562 * 3 2 1 6 6 H 1.09000 * 112.84917 * 48.80069 * 5 3 2 7 7 C 1.53784 * 113.61718 * 180.02562 * 5 3 2 8 8 C 1.53782 * 87.08264 * 140.06733 * 7 5 3 9 9 H 1.08991 * 113.62067 * 89.19957 * 8 7 5 10 10 N 1.46496 * 113.61202 * 220.02154 * 8 7 5 11 11 C 1.34774 * 120.00087 * 204.99813 * 10 8 7 12 12 O 1.21591 * 119.99897 * 359.97438 * 11 10 8 13 13 C 1.47542 * 120.00065 * 179.97438 * 11 10 8 14 14 C 1.40136 * 120.18817 * 180.02562 * 13 11 10 15 15 O 1.35651 * 120.15544 * 359.97438 * 14 13 11 16 16 C 1.42898 * 117.00391 * 180.02562 * 15 14 13 17 17 C 1.38709 * 119.69849 * 179.97438 * 14 13 11 18 18 C 1.38060 * 120.08515 * 359.74944 * 17 14 13 19 19 C 1.38557 * 120.38490 * 0.50407 * 18 17 14 20 20 C 1.50702 * 119.84476 * 179.76659 * 19 18 17 21 21 O 1.42903 * 109.47007 * 119.73049 * 20 19 18 22 22 Si 1.86300 * 109.47301 * 359.72536 * 20 19 18 23 23 C 1.37781 * 120.30202 * 359.49254 * 19 18 17 24 24 C 1.53783 * 87.08069 * 334.56633 * 8 7 5 25 25 H 1.08998 * 109.47273 * 299.99244 * 1 2 3 26 26 H 1.08994 * 109.47301 * 60.00332 * 1 2 3 27 27 H 1.09005 * 109.46683 * 180.02562 * 1 2 3 28 28 H 1.08991 * 113.61563 * 25.51462 * 7 5 3 29 29 H 1.09002 * 113.60816 * 254.60888 * 7 5 3 30 30 H 0.97003 * 120.00445 * 24.99328 * 10 8 7 31 31 H 1.08997 * 109.47159 * 180.02562 * 16 15 14 32 32 H 1.08997 * 109.47056 * 299.99733 * 16 15 14 33 33 H 1.08999 * 109.47401 * 59.99545 * 16 15 14 34 34 H 1.07999 * 119.96086 * 180.02562 * 17 14 13 35 35 H 1.07992 * 119.80853 * 180.25009 * 18 17 14 36 36 H 1.09004 * 109.46923 * 239.72618 * 20 19 18 37 37 H 0.96700 * 113.99509 * 299.99566 * 21 20 19 38 38 H 1.48498 * 109.99634 * 58.68378 * 22 20 19 39 39 H 1.48502 * 109.99691 * 180.02562 * 22 20 19 40 40 H 1.07999 * 120.04940 * 180.27158 * 23 19 18 41 41 H 1.09000 * 113.61722 * 139.98536 * 24 8 7 42 42 H 1.09007 * 113.61170 * 270.89030 * 24 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1960 0.0000 4 8 1.4032 2.2093 0.0005 5 6 3.5662 1.2750 -0.0006 6 1 4.0233 0.6366 -0.7567 7 6 4.1076 2.7144 0.0001 8 6 5.1827 2.2259 0.9852 9 1 6.0822 1.8492 0.4984 10 7 5.4736 3.1809 2.0573 11 6 6.6727 3.1590 2.6723 12 8 7.5128 2.3463 2.3376 13 6 6.9658 4.1212 3.7517 14 6 8.2115 4.1023 4.3935 15 8 9.1539 3.1986 4.0256 16 6 10.3994 3.2389 4.7250 17 6 8.4764 5.0118 5.4066 18 6 7.5182 5.9344 5.7765 19 6 6.2836 5.9529 5.1479 20 6 5.2447 6.9618 5.5649 21 8 4.9088 7.7887 4.4489 22 14 5.9233 8.0198 6.9400 23 6 6.0034 5.0567 4.1395 24 6 4.1936 1.1221 1.3951 25 1 -0.3634 0.5137 0.8900 26 1 -0.3633 0.5137 -0.8900 27 1 -0.3633 -1.0277 0.0005 28 1 3.4179 3.4401 0.4310 29 1 4.5090 3.0303 -0.9628 30 1 4.8033 3.8291 2.3246 31 1 11.0611 2.4663 4.3334 32 1 10.8617 4.2164 4.5877 33 1 10.2257 3.0650 5.7869 34 1 9.4351 5.0013 5.9038 35 1 7.7307 6.6431 6.5631 36 1 4.3523 6.4416 5.9132 37 1 5.6569 8.2827 4.0863 38 1 7.1581 8.7097 6.4878 39 1 4.9079 9.0185 7.3607 40 1 5.0413 5.0776 3.6494 41 1 4.6643 0.1526 1.5585 42 1 3.5273 1.4126 2.2075 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10970304_12496546.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:34:37 Heat of formation + Delta-G solvation = -124.402156 kcal Electronic energy + Delta-G solvation = -27068.976845 eV Core-core repulsion = 22982.654834 eV Total energy + Delta-G solvation = -4086.322011 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 322.134 amu Computer time = 0.97 seconds Orbital eigenvalues (eV) -42.00487 -41.60255 -40.33020 -39.25596 -38.87720 -37.29814 -37.23785 -34.56997 -32.55937 -31.86660 -29.38323 -28.62538 -27.01964 -26.88401 -26.23993 -25.06793 -23.04218 -22.08026 -21.48778 -20.69299 -19.46291 -18.86578 -18.44271 -18.14737 -17.85164 -17.37163 -17.09240 -16.86565 -16.48115 -16.26252 -16.14873 -15.95870 -15.82376 -15.59830 -14.86919 -14.59213 -14.57032 -14.36624 -14.13322 -13.72243 -13.61780 -13.57291 -13.34552 -13.20161 -12.99878 -12.53755 -12.47145 -12.28866 -12.27007 -12.11746 -11.82082 -11.76662 -11.73198 -11.32936 -10.90545 -10.55566 -10.24623 -10.00157 -9.30198 -5.03847 -0.27026 0.17508 1.17670 1.20550 1.51703 1.66763 1.84034 1.90279 2.19333 2.22302 2.69361 3.20992 3.27106 3.29222 3.48754 3.57408 3.62099 3.66272 3.71851 3.92376 3.99975 4.06575 4.17657 4.18250 4.18798 4.25166 4.33387 4.44382 4.49799 4.51801 4.56153 4.58605 4.60732 4.64750 4.76777 4.84070 4.86840 5.02515 5.10232 5.21684 5.39812 5.47386 5.51963 6.26739 6.32863 6.53278 6.75354 7.31563 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.357 6.357 3 C 0.472 3.528 4 O -0.505 6.505 5 C -0.109 4.109 6 H 0.132 0.868 7 C -0.127 4.127 8 C 0.129 3.871 9 H 0.125 0.875 10 N -0.720 5.720 11 C 0.564 3.436 12 O -0.514 6.514 13 C -0.176 4.176 14 C 0.194 3.806 15 O -0.279 6.279 16 C 0.019 3.981 17 C -0.214 4.214 18 C -0.046 4.046 19 C -0.167 4.167 20 C -0.069 4.069 21 O -0.530 6.530 22 Si 0.681 3.319 23 C -0.020 4.020 24 C -0.134 4.134 25 H 0.063 0.937 26 H 0.064 0.936 27 H 0.103 0.897 28 H 0.102 0.898 29 H 0.089 0.911 30 H 0.401 0.599 31 H 0.105 0.895 32 H 0.058 0.942 33 H 0.059 0.941 34 H 0.141 0.859 35 H 0.134 0.866 36 H 0.120 0.880 37 H 0.377 0.623 38 H -0.259 1.259 39 H -0.256 1.256 40 H 0.136 0.864 41 H 0.090 0.910 42 H 0.091 0.909 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.248 -0.441 3.314 3.569 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.273 6.273 3 C 0.315 3.685 4 O -0.392 6.392 5 C -0.129 4.129 6 H 0.150 0.850 7 C -0.165 4.165 8 C 0.023 3.977 9 H 0.143 0.857 10 N -0.373 5.373 11 C 0.351 3.649 12 O -0.390 6.390 13 C -0.179 4.179 14 C 0.145 3.855 15 O -0.189 6.189 16 C -0.076 4.076 17 C -0.233 4.233 18 C -0.064 4.064 19 C -0.168 4.168 20 C -0.179 4.179 21 O -0.336 6.336 22 Si 0.583 3.417 23 C -0.038 4.038 24 C -0.173 4.173 25 H 0.082 0.918 26 H 0.083 0.917 27 H 0.121 0.879 28 H 0.121 0.879 29 H 0.107 0.893 30 H 0.237 0.763 31 H 0.124 0.876 32 H 0.076 0.924 33 H 0.078 0.922 34 H 0.159 0.841 35 H 0.152 0.848 36 H 0.137 0.863 37 H 0.224 0.776 38 H -0.184 1.184 39 H -0.181 1.181 40 H 0.153 0.847 41 H 0.109 0.891 42 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges 1.267 -0.344 3.288 3.541 hybrid contribution -0.296 0.880 -0.793 1.221 sum 0.972 0.536 2.495 2.730 Atomic orbital electron populations 1.23322 0.75964 1.04007 1.02690 1.86523 1.23697 1.33285 1.83776 1.23485 0.91588 0.81417 0.72035 1.90683 1.66988 1.36435 1.45122 1.22314 0.87644 1.01022 1.01897 0.85040 1.23391 0.97191 0.94904 1.01048 1.22406 0.97750 0.89497 0.88016 0.85695 1.45847 1.16320 1.37320 1.37784 1.17983 0.81832 0.83480 0.81560 1.90845 1.46028 1.38103 1.64007 1.19322 0.94021 1.02237 1.02365 1.19091 0.88113 0.87460 0.90869 1.86378 1.23241 1.51191 1.58125 1.23237 0.83786 1.03355 0.97259 1.21234 1.02027 0.99011 1.01004 1.21002 0.91981 0.96447 0.96981 1.20073 0.96146 1.00485 1.00052 1.24947 1.01500 0.95067 0.96393 1.86605 1.38737 1.61134 1.47141 0.95094 0.79407 0.83052 0.84182 1.20977 0.97661 0.91075 0.94116 1.23464 0.97978 1.01298 0.94532 0.91783 0.91730 0.87850 0.87912 0.89267 0.76333 0.87648 0.92363 0.92218 0.84114 0.84834 0.86259 0.77567 1.18428 1.18064 0.84669 0.89122 0.89043 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 10.56 101.05 1.07 1.05 16 2 O -0.36 -0.58 10.57 -39.25 -0.41 -0.99 16 3 C 0.47 0.90 7.49 36.00 0.27 1.17 16 4 O -0.50 -2.31 15.65 -18.75 -0.29 -2.61 16 5 C -0.11 0.09 4.26 -90.96 -0.39 -0.30 16 6 H 0.13 -0.34 8.14 -51.93 -0.42 -0.76 16 7 C -0.13 0.13 7.16 -25.92 -0.19 -0.05 16 8 C 0.13 -0.04 4.24 -67.12 -0.28 -0.33 16 9 H 0.13 0.07 7.46 -51.93 -0.39 -0.32 16 10 N -0.72 -0.18 5.30 -54.06 -0.29 -0.47 16 11 C 0.56 1.81 7.76 -12.47 -0.10 1.71 16 12 O -0.51 -3.48 14.76 -16.59 -0.24 -3.73 16 13 C -0.18 -0.34 5.89 -104.84 -0.62 -0.95 16 14 C 0.19 0.39 6.70 -38.70 -0.26 0.13 16 15 O -0.28 -0.88 8.57 -40.53 -0.35 -1.23 16 16 C 0.02 -0.02 9.81 101.05 0.99 0.97 16 17 C -0.21 0.12 9.03 -39.47 -0.36 -0.24 16 18 C -0.05 0.06 8.66 -39.53 -0.34 -0.28 16 19 C -0.17 0.16 5.39 -104.67 -0.56 -0.41 16 20 C -0.07 0.10 2.81 36.01 0.10 0.20 16 21 O -0.53 -0.01 12.76 -35.23 -0.45 -0.46 16 22 Si 0.68 -1.31 29.77 -169.99 -5.06 -6.37 16 23 C -0.02 0.00 9.09 -39.20 -0.36 -0.35 16 24 C -0.13 0.11 7.43 -25.92 -0.19 -0.08 16 25 H 0.06 -0.02 8.13 -51.93 -0.42 -0.44 16 26 H 0.06 -0.02 8.13 -51.93 -0.42 -0.44 16 27 H 0.10 -0.28 8.14 -51.93 -0.42 -0.70 16 28 H 0.10 -0.03 7.41 -51.93 -0.38 -0.42 16 29 H 0.09 -0.16 8.14 -51.93 -0.42 -0.58 16 30 H 0.40 -0.70 6.76 -40.82 -0.28 -0.97 16 31 H 0.11 -0.22 8.14 -51.93 -0.42 -0.64 16 32 H 0.06 -0.15 7.66 -51.93 -0.40 -0.54 16 33 H 0.06 -0.16 7.66 -51.93 -0.40 -0.56 16 34 H 0.14 -0.39 6.30 -52.49 -0.33 -0.72 16 35 H 0.13 -0.46 4.85 -52.49 -0.25 -0.72 16 36 H 0.12 -0.26 7.96 -51.93 -0.41 -0.68 16 37 H 0.38 -0.97 8.70 45.56 0.40 -0.57 16 38 H -0.26 0.01 7.10 56.52 0.40 0.41 16 39 H -0.26 -0.42 7.11 56.52 0.40 -0.02 16 40 H 0.14 -0.25 6.40 -52.49 -0.34 -0.59 16 41 H 0.09 -0.09 8.14 -51.93 -0.42 -0.51 16 42 H 0.09 -0.05 8.10 -51.93 -0.42 -0.47 16 LS Contribution 354.10 15.07 5.34 5.34 Total: 0.00 -10.17 354.10 -8.33 -18.50 By element: Atomic # 1 Polarization: -4.88 SS G_CDS: -5.36 Total: -10.24 kcal Atomic # 6 Polarization: 3.46 SS G_CDS: -1.21 Total: 2.25 kcal Atomic # 7 Polarization: -0.18 SS G_CDS: -0.29 Total: -0.47 kcal Atomic # 8 Polarization: -7.26 SS G_CDS: -1.75 Total: -9.01 kcal Atomic # 14 Polarization: -1.31 SS G_CDS: -5.06 Total: -6.37 kcal Total LS contribution 5.34 Total: 5.34 kcal Total: -10.17 -8.33 -18.50 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10970304_12496546.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -105.898 kcal (2) G-P(sol) polarization free energy of solvation -10.171 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -116.069 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.333 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.504 kcal (6) G-S(sol) free energy of system = (1) + (5) -124.402 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.97 seconds