Wall clock time and date at job start Sat Mar 6 2021 15:34:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45203 * 1 3 3 C 1.34226 * 116.99259 * 2 1 4 4 O 1.20829 * 120.00628 * 0.02562 * 3 2 1 5 5 C 1.50707 * 119.99870 * 180.02562 * 3 2 1 6 6 H 1.09002 * 112.90790 * 311.25401 * 5 3 2 7 7 C 1.53775 * 113.61351 * 82.50644 * 5 3 2 8 8 C 1.53779 * 87.08308 * 139.98235 * 7 5 3 9 9 H 1.09001 * 113.69151 * 89.12530 * 8 7 5 10 10 N 1.46495 * 113.61590 * 220.01604 * 8 7 5 11 11 C 1.34775 * 120.00480 * 252.49641 * 10 8 7 12 12 O 1.21285 * 119.99794 * 359.97438 * 11 10 8 13 13 C 1.50698 * 120.00249 * 180.02562 * 11 10 8 14 14 N 1.46500 * 109.46905 * 179.97438 * 13 11 10 15 15 C 1.35045 * 125.92911 * 125.00182 * 14 13 11 16 16 C 1.35082 * 107.97747 * 180.02562 * 15 14 13 17 17 C 1.50699 * 126.07214 * 180.02562 * 16 15 14 18 18 O 1.42894 * 109.47489 * 103.99564 * 17 16 15 19 19 Si 1.86308 * 109.47187 * 343.99552 * 17 16 15 20 20 C 1.40844 * 107.85025 * 0.26222 * 16 15 14 21 21 C 1.48415 * 126.03420 * 179.70046 * 20 16 15 22 22 C 1.39326 * 120.11854 * 223.02915 * 21 20 16 23 23 C 1.38017 * 119.88025 * 179.79157 * 22 21 20 24 24 C 1.38319 * 120.11983 * 0.46715 * 23 22 21 25 25 C 1.38322 * 120.24037 * 359.78549 * 24 23 22 26 26 C 1.38013 * 120.11767 * 359.97438 * 25 24 23 27 27 N 1.31622 * 107.92385 * 359.55403 * 20 16 15 28 28 C 1.53777 * 87.07987 * 334.56859 * 8 7 5 29 29 H 1.09007 * 109.46698 * 179.97438 * 1 2 3 30 30 H 1.08989 * 109.47170 * 299.99099 * 1 2 3 31 31 H 1.09003 * 109.47385 * 60.00182 * 1 2 3 32 32 H 1.09000 * 113.61648 * 25.43187 * 7 5 3 33 33 H 1.09006 * 113.61601 * 254.52835 * 7 5 3 34 34 H 0.97001 * 119.99870 * 72.50031 * 10 8 7 35 35 H 1.09001 * 109.46803 * 60.00178 * 13 11 10 36 36 H 1.08998 * 109.47352 * 300.00051 * 13 11 10 37 37 H 1.07994 * 126.00669 * 359.97438 * 15 14 13 38 38 H 1.09003 * 109.46814 * 224.00056 * 17 16 15 39 39 H 0.96705 * 114.00227 * 179.97438 * 18 17 16 40 40 H 1.48501 * 109.99750 * 298.68344 * 19 17 16 41 41 H 1.48502 * 109.99582 * 60.00421 * 19 17 16 42 42 H 1.08003 * 120.05959 * 359.97438 * 22 21 20 43 43 H 1.08008 * 119.94403 * 180.23015 * 23 22 21 44 44 H 1.08004 * 119.88311 * 179.76251 * 24 23 22 45 45 H 1.08004 * 119.94056 * 179.97438 * 25 24 23 46 46 H 1.07999 * 120.05882 * 180.02562 * 26 25 24 47 47 H 1.08999 * 113.61543 * 139.97891 * 28 8 7 48 48 H 1.09000 * 113.61587 * 270.80045 * 28 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1960 0.0000 4 8 1.4031 2.2094 0.0005 5 6 3.5662 1.2751 -0.0006 6 1 4.0250 0.6360 0.7539 7 6 4.1904 1.1242 -1.3978 8 6 5.1805 2.2274 -0.9886 9 1 6.0811 1.8501 -0.5042 10 7 5.4690 3.1839 -2.0600 11 6 6.6667 3.1629 -2.6777 12 8 7.5059 2.3524 -2.3461 13 6 6.9638 4.1472 -3.7794 14 7 8.3204 3.9208 -4.2839 15 6 8.6590 3.6884 -5.5704 16 6 9.9994 3.5310 -5.6268 17 6 10.8088 3.2539 -6.8674 18 8 11.4798 4.4478 -7.2751 19 14 9.6773 2.6807 -8.2320 20 6 10.5055 3.6666 -4.3195 21 6 11.9308 3.5604 -3.9196 22 6 12.2842 2.8530 -2.7725 23 6 13.6116 2.7537 -2.4076 24 6 14.5893 3.3631 -3.1730 25 6 14.2436 4.0711 -4.3099 26 6 12.9197 4.1725 -4.6867 27 7 9.4915 3.9072 -3.5155 28 6 4.1076 2.7144 -0.0004 29 1 -0.3633 -1.0278 -0.0005 30 1 -0.3633 0.5136 0.8900 31 1 -0.3634 0.5138 -0.8900 32 1 3.5224 1.4156 -2.2083 33 1 4.6609 0.1549 -1.5636 34 1 4.7981 3.8324 -2.3249 35 1 6.8859 5.1624 -3.3903 36 1 6.2472 4.0127 -4.5897 37 1 7.9777 3.6365 -6.4067 38 1 11.5444 2.4779 -6.6555 39 1 12.0215 4.3430 -8.0693 40 1 8.9973 1.4222 -7.8330 41 1 8.6696 3.7300 -8.5305 42 1 11.5212 2.3807 -2.1716 43 1 13.8871 2.2025 -1.5206 44 1 15.6265 3.2862 -2.8818 45 1 15.0109 4.5453 -4.9038 46 1 12.6509 4.7251 -5.5748 47 1 4.5110 3.0291 0.9621 48 1 3.4177 3.4418 -0.4284 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10970304_12622748.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:34:43 Heat of formation + Delta-G solvation = -4.078700 kcal Electronic energy + Delta-G solvation = -32738.752794 eV Core-core repulsion = 28149.725111 eV Total energy + Delta-G solvation = -4589.027683 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 372.156 amu Computer time = 1.30 seconds Orbital eigenvalues (eV) -42.45754 -42.01127 -40.84031 -39.65534 -39.18101 -37.64320 -37.38314 -34.90085 -34.57368 -32.30774 -31.71248 -31.37153 -29.64142 -28.80807 -27.03301 -26.88826 -25.75439 -24.12479 -23.28205 -22.66257 -21.86445 -21.52309 -20.95077 -20.55727 -19.06906 -18.48640 -18.36763 -18.24294 -17.97033 -17.48873 -17.34747 -16.74259 -16.53836 -16.37487 -16.01134 -15.78740 -15.65312 -15.28157 -15.08960 -14.79918 -14.70562 -14.55993 -14.29080 -14.20527 -13.98007 -13.92871 -13.78655 -13.69112 -13.46100 -13.32543 -13.10056 -12.69834 -12.62476 -12.45414 -12.12559 -11.97778 -11.96259 -11.85662 -11.78190 -11.57860 -11.44811 -11.15370 -10.54001 -10.27955 -10.16326 -9.67822 -9.63396 -9.20776 -4.99986 0.28979 0.69421 0.81874 1.06630 1.16712 1.33465 1.36288 1.58184 1.63113 1.83826 1.97521 2.03023 3.04698 3.06886 3.13303 3.25958 3.39845 3.49362 3.57509 3.58587 3.62971 3.78717 3.83141 3.88995 4.09833 4.12962 4.17370 4.22248 4.26816 4.30843 4.37079 4.39317 4.43325 4.48155 4.53044 4.61941 4.64963 4.70304 4.76965 4.88447 4.89329 4.91742 5.16361 5.25187 5.31985 5.35699 5.44713 5.76827 5.78790 5.80697 5.85130 6.21790 6.23880 6.65003 6.67980 6.73097 6.97592 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.357 6.357 3 C 0.472 3.528 4 O -0.505 6.505 5 C -0.109 4.109 6 H 0.132 0.868 7 C -0.134 4.134 8 C 0.128 3.872 9 H 0.125 0.875 10 N -0.719 5.719 11 C 0.502 3.498 12 O -0.502 6.502 13 C 0.115 3.885 14 N -0.358 5.358 15 C 0.059 3.941 16 C -0.203 4.203 17 C -0.029 4.029 18 O -0.546 6.546 19 Si 0.683 3.317 20 C 0.135 3.865 21 C -0.021 4.021 22 C -0.090 4.090 23 C -0.126 4.126 24 C -0.111 4.111 25 C -0.126 4.126 26 C -0.093 4.093 27 N -0.247 5.247 28 C -0.126 4.126 29 H 0.104 0.896 30 H 0.065 0.935 31 H 0.064 0.936 32 H 0.091 0.909 33 H 0.090 0.910 34 H 0.404 0.596 35 H 0.121 0.879 36 H 0.127 0.873 37 H 0.172 0.828 38 H 0.072 0.928 39 H 0.379 0.621 40 H -0.257 1.257 41 H -0.254 1.254 42 H 0.124 0.876 43 H 0.124 0.876 44 H 0.123 0.877 45 H 0.126 0.874 46 H 0.147 0.853 47 H 0.090 0.910 48 H 0.104 0.896 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.626 -1.000 -3.975 4.410 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.273 6.273 3 C 0.315 3.685 4 O -0.392 6.392 5 C -0.128 4.128 6 H 0.150 0.850 7 C -0.173 4.173 8 C 0.022 3.978 9 H 0.143 0.857 10 N -0.372 5.372 11 C 0.285 3.715 12 O -0.375 6.375 13 C -0.010 4.010 14 N -0.140 5.140 15 C -0.085 4.085 16 C -0.214 4.214 17 C -0.141 4.141 18 O -0.352 6.352 19 Si 0.584 3.416 20 C -0.031 4.031 21 C -0.023 4.023 22 C -0.109 4.109 23 C -0.144 4.144 24 C -0.130 4.130 25 C -0.144 4.144 26 C -0.112 4.112 27 N -0.067 5.067 28 C -0.164 4.164 29 H 0.122 0.878 30 H 0.083 0.917 31 H 0.082 0.918 32 H 0.110 0.890 33 H 0.108 0.892 34 H 0.239 0.761 35 H 0.139 0.861 36 H 0.145 0.855 37 H 0.189 0.811 38 H 0.090 0.910 39 H 0.227 0.773 40 H -0.182 1.182 41 H -0.179 1.179 42 H 0.142 0.858 43 H 0.142 0.858 44 H 0.141 0.859 45 H 0.143 0.857 46 H 0.165 0.835 47 H 0.108 0.892 48 H 0.122 0.878 Dipole moment (debyes) X Y Z Total from point charges -2.943 -1.001 -2.197 3.807 hybrid contribution -0.618 0.185 -0.255 0.694 sum -3.561 -0.816 -2.453 4.400 Atomic orbital electron populations 1.23336 0.75838 1.04097 1.02721 1.86523 1.23799 1.33221 1.83723 1.23449 0.91533 0.81454 0.72064 1.90685 1.66976 1.36428 1.45134 1.22302 0.87790 1.01002 1.01755 0.84978 1.23455 0.97934 1.01206 0.94690 1.22451 0.97911 0.89449 0.87941 0.85715 1.45847 1.16076 1.37414 1.37852 1.20565 0.82264 0.85171 0.83474 1.90825 1.45534 1.37712 1.63390 1.21525 0.80344 1.00792 0.98365 1.47800 1.05689 1.55661 1.04846 1.22145 0.96522 1.01852 0.88031 1.19379 0.92093 1.15738 0.94206 1.23872 1.00640 0.90596 0.98949 1.86466 1.66481 1.33350 1.48949 0.95218 0.81867 0.79593 0.84873 1.20655 0.92802 0.99016 0.90625 1.17767 0.88056 1.00275 0.96173 1.21253 0.96546 0.97860 0.95275 1.21089 0.92617 1.00468 1.00209 1.21294 0.99492 0.97068 0.95142 1.21121 0.96072 0.99833 0.97332 1.21643 0.91892 0.97896 0.99764 1.77803 0.89376 1.22530 1.16984 1.23380 0.97037 0.94958 1.01024 0.87773 0.91661 0.91772 0.89004 0.89166 0.76065 0.86140 0.85482 0.81115 0.90960 0.77303 1.18179 1.17851 0.85816 0.85796 0.85948 0.85653 0.83507 0.89159 0.87798 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 101.05 1.07 1.04 16 2 O -0.36 -0.40 10.57 -39.25 -0.41 -0.81 16 3 C 0.47 0.58 7.48 36.01 0.27 0.85 16 4 O -0.50 -1.93 15.65 -18.75 -0.29 -2.22 16 5 C -0.11 0.17 4.26 -90.96 -0.39 -0.22 16 6 H 0.13 -0.40 8.14 -51.93 -0.42 -0.82 16 7 C -0.13 0.24 7.43 -25.92 -0.19 0.05 16 8 C 0.13 -0.19 4.24 -67.12 -0.28 -0.48 16 9 H 0.13 0.00 7.46 -51.93 -0.39 -0.39 16 10 N -0.72 1.45 5.35 -53.02 -0.28 1.17 16 11 C 0.50 0.51 7.86 -10.99 -0.09 0.43 16 12 O -0.50 -2.99 15.30 5.55 0.08 -2.91 16 13 C 0.12 -0.13 6.99 -5.19 -0.04 -0.16 16 14 N -0.36 -1.21 3.40 -62.58 -0.21 -1.42 16 15 C 0.06 0.17 9.96 -17.26 -0.17 -0.01 16 16 C -0.20 -0.79 5.38 -104.76 -0.56 -1.35 16 17 C -0.03 -0.02 2.16 36.01 0.08 0.06 16 18 O -0.55 0.04 10.41 -35.23 -0.37 -0.32 16 19 Si 0.68 -0.73 30.81 -169.99 -5.24 -5.97 16 20 C 0.14 0.78 6.66 -82.78 -0.55 0.23 16 21 C -0.02 -0.10 5.74 -104.90 -0.60 -0.70 16 22 C -0.09 -0.41 9.78 -39.26 -0.38 -0.79 16 23 C -0.13 -0.35 10.03 -39.63 -0.40 -0.74 16 24 C -0.11 -0.21 10.04 -39.52 -0.40 -0.61 16 25 C -0.13 -0.24 10.03 -39.63 -0.40 -0.64 16 26 C -0.09 -0.31 9.05 -39.26 -0.36 -0.66 16 27 N -0.25 -1.60 11.67 33.43 0.39 -1.21 16 28 C -0.13 0.26 7.15 -25.92 -0.19 0.08 16 29 H 0.10 -0.32 8.14 -51.92 -0.42 -0.75 16 30 H 0.06 -0.05 8.13 -51.94 -0.42 -0.47 16 31 H 0.06 -0.06 8.13 -51.93 -0.42 -0.48 16 32 H 0.09 -0.17 8.09 -51.93 -0.42 -0.59 16 33 H 0.09 -0.14 8.14 -51.93 -0.42 -0.57 16 34 H 0.40 -1.99 8.73 -40.82 -0.36 -2.34 16 35 H 0.12 -0.38 8.14 -51.93 -0.42 -0.81 16 36 H 0.13 -0.63 8.07 -51.93 -0.42 -1.05 16 37 H 0.17 0.01 6.37 -52.49 -0.33 -0.33 16 38 H 0.07 0.02 7.96 -51.93 -0.41 -0.39 16 39 H 0.38 -1.93 8.74 45.56 0.40 -1.53 16 40 H -0.26 -0.50 7.11 56.52 0.40 -0.09 16 41 H -0.25 -0.26 7.02 56.52 0.40 0.14 16 42 H 0.12 0.61 8.06 -52.48 -0.42 0.19 16 43 H 0.12 0.11 8.06 -52.48 -0.42 -0.31 16 44 H 0.12 -0.03 8.06 -52.48 -0.42 -0.45 16 45 H 0.13 -0.04 8.06 -52.48 -0.42 -0.46 16 46 H 0.15 0.40 5.34 -52.49 -0.28 0.12 16 47 H 0.09 -0.23 8.14 -51.93 -0.42 -0.65 16 48 H 0.10 -0.17 7.41 -51.93 -0.39 -0.56 16 LS Contribution 409.47 15.07 6.17 6.17 Total: 0.00 -13.57 409.47 -10.19 -23.77 By element: Atomic # 1 Polarization: -6.15 SS G_CDS: -6.45 Total: -12.60 kcal Atomic # 6 Polarization: -0.07 SS G_CDS: -3.58 Total: -3.65 kcal Atomic # 7 Polarization: -1.36 SS G_CDS: -0.11 Total: -1.46 kcal Atomic # 8 Polarization: -5.27 SS G_CDS: -0.99 Total: -6.26 kcal Atomic # 14 Polarization: -0.73 SS G_CDS: -5.24 Total: -5.97 kcal Total LS contribution 6.17 Total: 6.17 kcal Total: -13.57 -10.19 -23.77 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10970304_12622748.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 19.687 kcal (2) G-P(sol) polarization free energy of solvation -13.574 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 6.113 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.192 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.766 kcal (6) G-S(sol) free energy of system = (1) + (5) -4.079 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.30 seconds