Wall clock time and date at job start Sat Mar 6 2021 15:34:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45202 * 1 3 3 C 1.34228 * 116.99753 * 2 1 4 4 O 1.20816 * 120.00264 * 0.02562 * 3 2 1 5 5 C 1.50701 * 119.99812 * 180.02562 * 3 2 1 6 6 H 1.08998 * 112.84814 * 48.80913 * 5 3 2 7 7 C 1.53785 * 113.61514 * 180.02562 * 5 3 2 8 8 C 1.53779 * 87.08098 * 140.06729 * 7 5 3 9 9 H 1.08997 * 113.61464 * 89.20172 * 8 7 5 10 10 N 1.46507 * 113.61137 * 220.02116 * 8 7 5 11 11 C 1.34777 * 119.99613 * 205.00042 * 10 8 7 12 12 O 1.21284 * 120.00465 * 359.97438 * 11 10 8 13 13 C 1.50702 * 119.99896 * 180.02562 * 11 10 8 14 14 N 1.46503 * 109.47132 * 179.97438 * 13 11 10 15 15 C 1.35030 * 125.92495 * 124.98108 * 14 13 11 16 16 C 1.35096 * 107.97521 * 179.75983 * 15 14 13 17 17 C 1.50697 * 126.07733 * 180.25852 * 16 15 14 18 18 O 1.42897 * 109.47174 * 104.02027 * 17 16 15 19 19 Si 1.86305 * 109.47033 * 344.01909 * 17 16 15 20 20 C 1.40847 * 107.84391 * 0.43098 * 16 15 14 21 21 C 1.48414 * 126.03702 * 179.82605 * 20 16 15 22 22 C 1.39355 * 120.06226 * 43.65131 * 21 20 16 23 23 C 1.37929 * 119.93254 * 180.25284 * 22 21 20 24 24 C 1.38813 * 120.06384 * 359.45444 * 23 22 21 25 25 O 1.35888 * 119.93379 * 180.26953 * 24 23 22 26 26 C 1.42906 * 116.99736 * 180.02562 * 25 24 23 27 27 C 1.38818 * 120.12988 * 0.29832 * 24 23 22 28 28 C 1.37922 * 120.06331 * 359.97438 * 27 24 23 29 29 N 1.31625 * 107.92513 * 359.56544 * 20 16 15 30 30 C 1.53783 * 87.08385 * 334.56569 * 8 7 5 31 31 H 1.09003 * 109.47024 * 59.99771 * 1 2 3 32 32 H 1.09004 * 109.47092 * 179.97438 * 1 2 3 33 33 H 1.08999 * 109.47104 * 299.99265 * 1 2 3 34 34 H 1.09001 * 113.61080 * 25.51326 * 7 5 3 35 35 H 1.08998 * 113.61306 * 254.61491 * 7 5 3 36 36 H 0.96999 * 119.99916 * 24.99973 * 10 8 7 37 37 H 1.08998 * 109.47382 * 59.99732 * 13 11 10 38 38 H 1.09006 * 109.46483 * 299.99617 * 13 11 10 39 39 H 1.08000 * 126.01549 * 0.05217 * 15 14 13 40 40 H 1.09004 * 109.47287 * 224.02241 * 17 16 15 41 41 H 0.96697 * 113.99872 * 299.99582 * 18 17 16 42 42 H 1.48498 * 109.99729 * 179.97438 * 19 17 16 43 43 H 1.48495 * 110.00105 * 301.31845 * 19 17 16 44 44 H 1.07997 * 120.03666 * 359.97438 * 22 21 20 45 45 H 1.07996 * 119.96141 * 179.72905 * 23 22 21 46 46 H 1.08994 * 109.47183 * 60.00376 * 26 25 24 47 47 H 1.08998 * 109.46827 * 180.02562 * 26 25 24 48 48 H 1.08999 * 109.47093 * 300.00361 * 26 25 24 49 49 H 1.08003 * 119.96844 * 179.97438 * 27 24 23 50 50 H 1.07999 * 120.03543 * 179.97438 * 28 27 24 51 51 H 1.08996 * 113.61535 * 139.98003 * 30 8 7 52 52 H 1.08994 * 113.61467 * 270.88821 * 30 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2749 -0.0006 6 1 4.0233 0.6366 -0.7568 7 6 4.1077 2.7143 0.0001 8 6 5.1828 2.2257 0.9852 9 1 6.0823 1.8490 0.4983 10 7 5.4738 3.1808 2.0574 11 6 6.6729 3.1587 2.6723 12 8 7.5109 2.3480 2.3384 13 6 6.9720 4.1407 3.7756 14 7 8.3294 3.9128 4.2774 15 6 9.3104 4.8373 4.3566 16 6 10.4056 4.2398 4.8750 17 6 11.7332 4.9001 5.1440 18 8 11.8711 5.1386 6.5462 19 14 11.8184 6.5197 4.2272 20 6 10.0872 2.8891 5.1155 21 6 11.0003 1.8637 5.6790 22 6 11.8109 2.1743 6.7691 23 6 12.6624 1.2209 7.2874 24 6 12.7039 -0.0503 6.7314 25 8 13.5398 -0.9892 7.2476 26 6 13.5322 -2.2762 6.6265 27 6 11.8938 -0.3641 5.6487 28 6 11.0445 0.5868 5.1226 29 7 8.8350 2.6981 4.7575 30 6 4.1937 1.1219 1.3952 31 1 -0.3633 0.5139 -0.8900 32 1 -0.3633 -1.0277 -0.0005 33 1 -0.3633 0.5137 0.8900 34 1 3.4180 3.4400 0.4311 35 1 4.5091 3.0303 -0.9628 36 1 4.8034 3.8289 2.3247 37 1 6.2573 4.0042 4.5872 38 1 6.8930 5.1568 3.3889 39 1 9.2318 5.8735 4.0623 40 1 12.5385 4.2482 4.8054 41 1 11.1868 5.7126 6.9167 42 1 13.1227 7.1811 4.4848 43 1 11.6444 6.2887 2.7707 44 1 11.7759 3.1618 7.2049 45 1 13.2940 1.4625 8.1294 46 1 13.8159 -2.1758 5.5790 47 1 14.2422 -2.9289 7.1346 48 1 12.5326 -2.7057 6.6927 49 1 11.9286 -1.3539 5.2178 50 1 10.4147 0.3423 4.2800 51 1 4.6643 0.1525 1.5584 52 1 3.5275 1.4123 2.2075 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10970304_12622750.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:34:46 Heat of formation + Delta-G solvation = -45.689562 kcal Electronic energy + Delta-G solvation = -37015.025888 eV Core-core repulsion = 31949.974011 eV Total energy + Delta-G solvation = -5065.051877 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 402.172 amu Computer time = 1.63 seconds Orbital eigenvalues (eV) -42.45324 -41.99813 -41.05414 -40.75556 -39.19711 -38.43617 -37.60056 -37.45613 -34.80224 -34.36361 -32.31082 -31.81220 -31.24573 -29.58032 -28.82862 -28.05583 -26.86136 -26.79542 -25.69317 -24.16355 -23.44938 -22.63543 -21.81033 -21.50192 -21.03234 -20.61580 -19.18449 -19.04702 -18.56032 -18.32076 -17.97824 -17.47934 -17.28170 -17.07711 -16.78385 -16.71443 -16.63030 -16.15689 -16.14249 -15.98894 -15.58011 -15.37066 -15.18054 -14.72826 -14.66937 -14.51191 -14.43957 -14.34692 -14.22113 -13.99368 -13.72431 -13.61295 -13.59122 -13.25146 -13.04566 -12.99437 -12.77058 -12.56933 -12.44323 -12.36948 -12.16068 -12.03938 -11.88006 -11.87693 -11.84005 -11.58245 -11.46512 -11.15597 -10.42698 -10.21193 -10.16309 -10.04827 -9.59193 -8.98514 -4.97991 0.08725 0.32530 0.87461 1.02620 1.33511 1.44982 1.47544 1.65549 1.65975 1.80085 2.08755 2.17797 2.30899 2.75686 3.20876 3.28442 3.40411 3.59601 3.63536 3.68652 3.72840 3.73757 3.80859 3.93341 3.98307 4.02662 4.19129 4.22532 4.23327 4.24732 4.26391 4.32935 4.36052 4.43732 4.45666 4.48047 4.55034 4.60791 4.66319 4.66739 4.74657 4.78637 4.79736 4.89342 4.90023 5.03400 5.04636 5.09926 5.24320 5.30290 5.43979 5.51720 5.58195 5.73414 5.98209 6.35268 6.45303 6.61531 6.66208 6.97298 7.14977 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.366 6.366 3 C 0.472 3.528 4 O -0.534 6.534 5 C -0.108 4.108 6 H 0.146 0.854 7 C -0.114 4.114 8 C 0.129 3.871 9 H 0.108 0.892 10 N -0.704 5.704 11 C 0.497 3.503 12 O -0.564 6.564 13 C 0.109 3.891 14 N -0.360 5.360 15 C 0.080 3.920 16 C -0.270 4.270 17 C -0.036 4.036 18 O -0.553 6.553 19 Si 0.805 3.195 20 C 0.115 3.885 21 C -0.071 4.071 22 C -0.051 4.051 23 C -0.164 4.164 24 C 0.124 3.876 25 O -0.333 6.333 26 C 0.017 3.983 27 C -0.214 4.214 28 C -0.065 4.065 29 N -0.296 5.296 30 C -0.130 4.130 31 H 0.062 0.938 32 H 0.126 0.874 33 H 0.062 0.938 34 H 0.104 0.896 35 H 0.098 0.902 36 H 0.421 0.579 37 H 0.142 0.858 38 H 0.182 0.818 39 H 0.229 0.771 40 H 0.087 0.913 41 H 0.395 0.605 42 H -0.303 1.303 43 H -0.293 1.293 44 H 0.162 0.838 45 H 0.144 0.856 46 H 0.063 0.937 47 H 0.120 0.880 48 H 0.063 0.937 49 H 0.146 0.854 50 H 0.117 0.883 51 H 0.084 0.916 52 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.024 4.916 -0.727 7.809 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.282 6.282 3 C 0.316 3.684 4 O -0.423 6.423 5 C -0.128 4.128 6 H 0.164 0.836 7 C -0.152 4.152 8 C 0.023 3.977 9 H 0.126 0.874 10 N -0.357 5.357 11 C 0.283 3.717 12 O -0.441 6.441 13 C -0.015 4.015 14 N -0.142 5.142 15 C -0.065 4.065 16 C -0.281 4.281 17 C -0.146 4.146 18 O -0.361 6.361 19 Si 0.711 3.289 20 C -0.050 4.050 21 C -0.073 4.073 22 C -0.070 4.070 23 C -0.183 4.183 24 C 0.078 3.922 25 O -0.246 6.246 26 C -0.077 4.077 27 C -0.233 4.233 28 C -0.085 4.085 29 N -0.118 5.118 30 C -0.169 4.169 31 H 0.081 0.919 32 H 0.144 0.856 33 H 0.081 0.919 34 H 0.123 0.877 35 H 0.116 0.884 36 H 0.259 0.741 37 H 0.160 0.840 38 H 0.200 0.800 39 H 0.245 0.755 40 H 0.104 0.896 41 H 0.245 0.755 42 H -0.231 1.231 43 H -0.220 1.220 44 H 0.179 0.821 45 H 0.161 0.839 46 H 0.081 0.919 47 H 0.138 0.862 48 H 0.082 0.918 49 H 0.163 0.837 50 H 0.135 0.865 51 H 0.102 0.898 52 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges -5.751 3.914 -1.636 7.146 hybrid contribution 0.047 -0.619 -0.326 0.701 sum -5.704 3.295 -1.962 6.873 Atomic orbital electron populations 1.23531 0.74962 1.05575 1.02550 1.86527 1.24854 1.33350 1.83477 1.23937 0.92418 0.81007 0.71006 1.90659 1.67809 1.37211 1.46665 1.22437 0.86050 1.02017 1.02282 0.83622 1.23314 0.96364 0.94407 1.01138 1.22300 0.97234 0.89825 0.88335 0.87382 1.45743 1.15802 1.37216 1.36927 1.21173 0.82105 0.85043 0.83390 1.90817 1.48001 1.40099 1.65140 1.22021 0.80432 1.02124 0.96890 1.48131 1.11110 1.06455 1.48470 1.22891 0.86887 0.97524 0.99206 1.20628 0.98927 0.93596 1.14983 1.24487 0.93337 1.08321 0.88431 1.86399 1.55748 1.72841 1.21125 0.94168 0.83354 0.75762 0.75629 1.20696 0.91756 0.93757 0.98814 1.17909 0.98662 0.92282 0.98420 1.21523 0.92023 1.00224 0.93257 1.20621 1.03228 0.90930 1.03505 1.19339 0.90301 0.89839 0.92717 1.86058 1.58896 1.22579 1.57089 1.23345 1.03855 0.81240 0.99245 1.21300 1.00859 1.01656 0.99449 1.21041 0.96677 0.92112 0.98623 1.77709 1.10941 1.04270 1.18843 1.23416 0.97772 1.01077 0.94642 0.91899 0.85570 0.91884 0.87745 0.88374 0.74051 0.84024 0.80038 0.75526 0.89575 0.75493 1.23076 1.22038 0.82087 0.83863 0.91862 0.86215 0.91825 0.83667 0.86507 0.89752 0.88858 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.05 10.56 113.37 1.20 1.14 16 2 O -0.37 -0.78 10.57 -51.40 -0.54 -1.33 16 3 C 0.47 1.01 7.49 71.24 0.53 1.54 16 4 O -0.53 -3.87 15.65 21.99 0.34 -3.53 16 5 C -0.11 0.41 4.26 -11.01 -0.05 0.36 16 6 H 0.15 -0.99 8.14 -2.39 -0.02 -1.01 16 7 C -0.11 0.68 7.16 31.12 0.22 0.90 16 8 C 0.13 -0.54 4.24 45.52 0.19 -0.34 16 9 H 0.11 -0.03 7.46 -2.39 -0.02 -0.05 16 10 N -0.70 4.73 5.35 -440.02 -2.36 2.38 16 11 C 0.50 -0.37 7.86 87.66 0.69 0.32 16 12 O -0.56 -6.43 15.30 -3.04 -0.05 -6.48 16 13 C 0.11 -0.89 6.99 85.63 0.60 -0.29 16 14 N -0.36 -0.42 3.40 -351.90 -1.20 -1.62 16 15 C 0.08 -0.23 9.96 83.48 0.83 0.60 16 16 C -0.27 -0.84 5.34 -19.95 -0.11 -0.94 16 17 C -0.04 -0.04 2.18 71.24 0.16 0.12 16 18 O -0.55 0.33 10.43 -148.98 -1.55 -1.22 16 19 Si 0.81 -2.84 30.76 68.60 2.11 -0.73 16 20 C 0.12 1.16 6.66 42.53 0.28 1.45 16 21 C -0.07 -0.80 5.73 -20.03 -0.11 -0.92 16 22 C -0.05 -0.46 9.04 22.47 0.20 -0.26 16 23 C -0.16 -1.50 9.97 22.33 0.22 -1.28 16 24 C 0.12 1.21 6.69 22.55 0.15 1.36 16 25 O -0.33 -2.78 10.49 -92.29 -0.97 -3.75 16 26 C 0.02 0.01 9.81 113.37 1.11 1.12 16 27 C -0.21 -1.91 9.02 22.33 0.20 -1.71 16 28 C -0.07 -0.76 9.77 22.46 0.22 -0.54 16 29 N -0.30 -3.23 11.67 -48.16 -0.56 -3.79 16 30 C -0.13 0.48 7.43 31.12 0.23 0.71 16 31 H 0.06 -0.10 8.13 -2.39 -0.02 -0.12 16 32 H 0.13 -0.88 8.14 -2.38 -0.02 -0.90 16 33 H 0.06 -0.11 8.13 -2.39 -0.02 -0.13 16 34 H 0.10 -0.58 7.41 -2.39 -0.02 -0.60 16 35 H 0.10 -0.72 8.14 -2.39 -0.02 -0.74 16 36 H 0.42 -5.74 8.73 -92.71 -0.81 -6.55 16 37 H 0.14 -1.77 8.14 -2.39 -0.02 -1.79 16 38 H 0.18 -3.46 8.07 -2.38 -0.02 -3.48 16 39 H 0.23 -3.22 6.43 -2.91 -0.02 -3.24 16 40 H 0.09 0.50 7.96 -2.39 -0.02 0.48 16 41 H 0.39 -3.79 8.70 -74.06 -0.64 -4.43 16 42 H -0.30 -1.37 7.11 99.48 0.71 -0.66 16 43 H -0.29 -0.71 7.11 99.48 0.71 0.00 16 44 H 0.16 1.07 5.36 -2.91 -0.02 1.06 16 45 H 0.14 0.89 8.06 -2.91 -0.02 0.87 16 46 H 0.06 -0.05 7.65 -2.39 -0.02 -0.07 16 47 H 0.12 -0.42 8.14 -2.39 -0.02 -0.44 16 48 H 0.06 -0.05 7.65 -2.39 -0.02 -0.07 16 49 H 0.15 0.64 6.28 -2.91 -0.02 0.62 16 50 H 0.12 1.50 8.06 -2.91 -0.02 1.47 16 51 H 0.08 -0.19 8.14 -2.39 -0.02 -0.21 16 52 H 0.09 -0.35 8.10 -2.39 -0.02 -0.37 16 Total: 0.00 -38.64 439.03 1.58 -37.06 By element: Atomic # 1 Polarization: -19.92 SS G_CDS: -0.42 Total: -20.34 kcal Atomic # 6 Polarization: -3.43 SS G_CDS: 6.78 Total: 3.35 kcal Atomic # 7 Polarization: 1.08 SS G_CDS: -4.11 Total: -3.03 kcal Atomic # 8 Polarization: -13.53 SS G_CDS: -2.77 Total: -16.30 kcal Atomic # 14 Polarization: -2.84 SS G_CDS: 2.11 Total: -0.73 kcal Total: -38.64 1.58 -37.06 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10970304_12622750.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -8.633 kcal (2) G-P(sol) polarization free energy of solvation -38.636 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -47.268 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.579 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.057 kcal (6) G-S(sol) free energy of system = (1) + (5) -45.690 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.64 seconds