Wall clock time and date at job start Sat Mar 6 2021 15:34:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45200 * 1 3 3 C 1.34230 * 117.00059 * 2 1 4 4 O 1.20826 * 119.99983 * 0.02562 * 3 2 1 5 5 C 1.50695 * 120.00099 * 179.97438 * 3 2 1 6 6 H 1.09000 * 112.90993 * 311.26183 * 5 3 2 7 7 C 1.53792 * 113.61057 * 82.50804 * 5 3 2 8 8 C 1.53787 * 87.07905 * 139.98084 * 7 5 3 9 9 H 1.08997 * 113.68981 * 89.12812 * 8 7 5 10 10 N 1.46503 * 113.61020 * 220.01758 * 8 7 5 11 11 C 1.34773 * 119.99748 * 252.49597 * 10 8 7 12 12 O 1.21628 * 120.00357 * 0.02562 * 11 10 8 13 13 C 1.47297 * 119.99725 * 180.02562 * 11 10 8 14 14 C 1.40371 * 120.04363 * 179.97438 * 13 11 10 15 15 O 1.35670 * 120.13955 * 0.02562 * 14 13 11 16 16 C 1.38317 * 119.71971 * 179.74364 * 14 13 11 17 17 C 1.39568 * 119.81799 * 0.50204 * 16 14 13 18 18 C 1.47564 * 119.95505 * 179.78915 * 17 16 14 19 19 C 1.36105 * 125.93948 * 179.72690 * 18 17 16 20 20 C 1.40800 * 106.73149 * 180.02562 * 19 18 17 21 21 C 1.34828 * 107.04950 * 0.02562 * 20 19 18 22 22 C 1.50705 * 125.65410 * 179.97438 * 21 20 19 23 23 O 1.42902 * 109.46956 * 64.99909 * 22 21 20 24 24 Si 1.86295 * 109.47371 * 184.99674 * 22 21 20 25 25 O 1.34228 * 108.69468 * 359.97438 * 21 20 19 26 26 C 1.39959 * 120.08353 * 359.51783 * 17 16 14 27 27 C 1.36387 * 120.28358 * 0.22584 * 26 17 16 28 28 C 1.53780 * 87.08359 * 334.56851 * 8 7 5 29 29 H 1.09003 * 109.47327 * 59.98958 * 1 2 3 30 30 H 1.08995 * 109.47578 * 179.97438 * 1 2 3 31 31 H 1.09001 * 109.46958 * 299.99792 * 1 2 3 32 32 H 1.08998 * 113.61186 * 25.43092 * 7 5 3 33 33 H 1.08998 * 113.61190 * 254.53077 * 7 5 3 34 34 H 0.97001 * 119.99606 * 72.50318 * 10 8 7 35 35 H 0.96698 * 113.99886 * 90.00002 * 15 14 13 36 36 H 1.08007 * 120.09130 * 180.29637 * 16 14 13 37 37 H 1.08000 * 126.63644 * 359.77385 * 19 18 17 38 38 H 1.08000 * 126.47146 * 179.97438 * 20 19 18 39 39 H 1.08999 * 109.47098 * 305.00196 * 22 21 20 40 40 H 0.96694 * 113.99914 * 60.00139 * 23 22 21 41 41 H 1.48498 * 110.00184 * 179.97438 * 24 22 21 42 42 H 1.48503 * 110.00158 * 301.32326 * 24 22 21 43 43 H 1.08005 * 119.86045 * 180.25392 * 26 17 16 44 44 H 1.07996 * 119.91221 * 180.02562 * 27 26 17 45 45 H 1.08993 * 113.61399 * 139.98033 * 28 8 7 46 46 H 1.09006 * 113.61390 * 270.80559 * 28 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2749 0.0006 6 1 4.0244 0.6360 0.7556 7 6 4.1916 1.1233 -1.3963 8 6 5.1814 2.2267 -0.9866 9 1 6.0816 1.8495 -0.5015 10 7 5.4708 3.1828 -2.0583 11 6 6.6689 3.1614 -2.6750 12 8 7.5098 2.3481 -2.3422 13 6 6.9601 4.1231 -3.7521 14 6 8.2079 4.1020 -4.3947 15 8 9.1486 3.1964 -4.0264 16 6 8.4723 5.0046 -5.4088 17 6 7.5014 5.9364 -5.7791 18 6 7.7819 6.9038 -6.8576 19 6 6.9263 7.8568 -7.3182 20 6 7.6024 8.5476 -8.3421 21 6 8.8240 7.9887 -8.4562 22 6 9.8945 8.4083 -9.4305 23 8 10.3260 9.7351 -9.1217 24 14 11.3404 7.2402 -9.3056 25 8 8.9289 6.9967 -7.5581 26 6 6.2600 5.9507 -5.1328 27 6 5.9934 5.0590 -4.1358 28 6 4.1078 2.7142 0.0006 29 1 -0.3634 0.5140 -0.8899 30 1 -0.3634 -1.0276 -0.0005 31 1 -0.3633 0.5138 0.8900 32 1 3.5241 1.4146 -2.2073 33 1 4.6620 0.1540 -1.5612 34 1 4.8000 3.8313 -2.3238 35 1 9.1050 2.3632 -4.5151 36 1 9.4286 4.9906 -5.9106 37 1 5.9217 8.0441 -6.9691 38 1 7.2151 9.3692 -8.9263 39 1 9.4935 8.3832 -10.4438 40 1 10.6951 9.8319 -8.2332 41 1 12.4027 7.6428 -10.2620 42 1 11.8761 7.2413 -7.9206 43 1 5.5098 6.6706 -5.4250 44 1 5.0334 5.0750 -3.6414 45 1 4.5105 3.0292 0.9632 46 1 3.4183 3.4415 -0.4282 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10970304_12807986.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:34:51 Heat of formation + Delta-G solvation = -111.319135 kcal Electronic energy + Delta-G solvation = -32485.971596 eV Core-core repulsion = 27696.856294 eV Total energy + Delta-G solvation = -4789.115302 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.134 amu Computer time = 1.18 seconds Orbital eigenvalues (eV) -43.77001 -42.04353 -41.42931 -40.15171 -38.84912 -38.20854 -37.85396 -37.32370 -34.79685 -34.21549 -33.25482 -31.35248 -30.57198 -29.39425 -27.48211 -26.96342 -26.55882 -24.53189 -24.12400 -22.85205 -22.29889 -21.86411 -21.36896 -20.83862 -19.72000 -18.96791 -18.73140 -18.58578 -17.97632 -17.68584 -17.52461 -17.42243 -16.98148 -16.64577 -16.55571 -16.13642 -15.94828 -15.88753 -15.84920 -15.33381 -14.92376 -14.50328 -14.43301 -14.33425 -14.14947 -14.04382 -13.80580 -13.76327 -13.67744 -13.63454 -13.43741 -13.06429 -12.97489 -12.79268 -12.59895 -12.39062 -12.07723 -11.90402 -11.85128 -11.81628 -11.39392 -11.16597 -10.86721 -10.80642 -10.65458 -10.14932 -9.99695 -9.05348 -5.02747 -0.82223 0.07819 0.62194 1.07848 1.11758 1.39843 1.42593 1.60319 1.67958 1.89317 1.93287 2.09976 2.59433 2.97864 3.11655 3.13334 3.21466 3.30591 3.49637 3.53460 3.61537 3.64908 3.81466 3.87047 3.91126 3.94491 4.12435 4.13381 4.20715 4.27841 4.33201 4.38318 4.44097 4.50172 4.54164 4.56711 4.63885 4.68896 4.73872 4.76727 4.80356 4.96046 4.97896 5.05627 5.14256 5.33835 5.34995 5.39476 5.43744 5.91842 6.19377 6.38457 6.66119 6.69550 7.15857 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.357 6.357 3 C 0.472 3.528 4 O -0.505 6.505 5 C -0.109 4.109 6 H 0.132 0.868 7 C -0.134 4.134 8 C 0.127 3.873 9 H 0.126 0.874 10 N -0.718 5.718 11 C 0.561 3.439 12 O -0.516 6.516 13 C -0.167 4.167 14 C 0.180 3.820 15 O -0.474 6.474 16 C -0.141 4.141 17 C 0.031 3.969 18 C 0.023 3.977 19 C -0.177 4.177 20 C -0.173 4.173 21 C -0.043 4.043 22 C -0.035 4.035 23 O -0.520 6.520 24 Si 0.698 3.302 25 O -0.162 6.162 26 C -0.116 4.116 27 C -0.064 4.064 28 C -0.127 4.127 29 H 0.063 0.937 30 H 0.104 0.896 31 H 0.064 0.936 32 H 0.091 0.909 33 H 0.090 0.910 34 H 0.401 0.599 35 H 0.399 0.601 36 H 0.144 0.856 37 H 0.156 0.844 38 H 0.156 0.844 39 H 0.138 0.862 40 H 0.381 0.619 41 H -0.248 1.248 42 H -0.255 1.255 43 H 0.139 0.861 44 H 0.136 0.864 45 H 0.089 0.911 46 H 0.103 0.897 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.792 -1.800 -2.007 4.652 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.273 6.273 3 C 0.315 3.685 4 O -0.393 6.393 5 C -0.129 4.129 6 H 0.150 0.850 7 C -0.173 4.173 8 C 0.022 3.978 9 H 0.144 0.856 10 N -0.370 5.370 11 C 0.349 3.651 12 O -0.392 6.392 13 C -0.170 4.170 14 C 0.133 3.867 15 O -0.286 6.286 16 C -0.160 4.160 17 C 0.031 3.969 18 C -0.027 4.027 19 C -0.196 4.196 20 C -0.192 4.192 21 C -0.094 4.094 22 C -0.144 4.144 23 O -0.327 6.327 24 Si 0.597 3.403 25 O -0.059 6.059 26 C -0.134 4.134 27 C -0.083 4.083 28 C -0.165 4.165 29 H 0.082 0.918 30 H 0.122 0.878 31 H 0.083 0.917 32 H 0.110 0.890 33 H 0.109 0.891 34 H 0.237 0.763 35 H 0.258 0.742 36 H 0.162 0.838 37 H 0.174 0.826 38 H 0.173 0.827 39 H 0.156 0.844 40 H 0.229 0.771 41 H -0.172 1.172 42 H -0.179 1.179 43 H 0.157 0.843 44 H 0.154 0.846 45 H 0.108 0.892 46 H 0.121 0.879 Dipole moment (debyes) X Y Z Total from point charges -2.317 -1.837 -1.753 3.438 hybrid contribution -1.067 1.127 0.336 1.587 sum -3.384 -0.711 -1.416 3.736 Atomic orbital electron populations 1.23329 0.75900 1.04058 1.02703 1.86522 1.23746 1.33263 1.83745 1.23473 0.91571 0.81432 0.72038 1.90682 1.66991 1.36437 1.45149 1.22313 0.87700 1.01004 1.01857 0.84979 1.23463 0.97956 1.01256 0.94583 1.22445 0.97880 0.89485 0.87997 0.85606 1.45861 1.16291 1.37185 1.37710 1.18007 0.81817 0.83578 0.81710 1.90848 1.45841 1.38330 1.64136 1.20475 0.95180 1.00390 1.00982 1.18278 0.86234 0.91221 0.90967 1.84775 1.51288 1.27962 1.64530 1.21599 1.00439 0.96421 0.97500 1.17758 0.94146 0.92675 0.92368 1.20319 0.85410 0.99998 0.96955 1.21918 1.01231 0.97205 0.99243 1.21586 0.93714 1.02890 1.01021 1.22942 0.98921 0.92019 0.95484 1.24361 1.01620 0.90761 0.97668 1.86665 1.81799 1.26121 1.38129 0.94483 0.77088 0.86579 0.82195 1.83946 1.35955 1.45921 1.40047 1.20707 0.95833 1.00228 0.96652 1.20821 0.98319 0.93283 0.95833 1.23389 0.97138 0.94937 1.01071 0.91776 0.87807 0.91704 0.89025 0.89088 0.76287 0.74202 0.83825 0.82606 0.82665 0.84413 0.77070 1.17167 1.17875 0.84333 0.84592 0.89200 0.87899 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 101.05 1.07 1.03 16 2 O -0.36 -0.34 10.57 -39.26 -0.41 -0.76 16 3 C 0.47 0.52 7.48 36.00 0.27 0.79 16 4 O -0.51 -1.88 15.65 -18.75 -0.29 -2.17 16 5 C -0.11 0.18 4.26 -90.95 -0.39 -0.20 16 6 H 0.13 -0.44 8.14 -51.93 -0.42 -0.86 16 7 C -0.13 0.26 7.43 -25.91 -0.19 0.07 16 8 C 0.13 -0.19 4.24 -67.11 -0.28 -0.47 16 9 H 0.13 -0.05 7.46 -51.93 -0.39 -0.44 16 10 N -0.72 0.87 5.30 -54.13 -0.29 0.58 16 11 C 0.56 0.94 7.75 -12.58 -0.10 0.84 16 12 O -0.52 -2.62 14.74 -16.71 -0.25 -2.86 16 13 C -0.17 -0.10 5.89 -104.78 -0.62 -0.72 16 14 C 0.18 0.26 6.71 -38.75 -0.26 0.00 16 15 O -0.47 -1.00 11.56 -40.67 -0.47 -1.47 16 16 C -0.14 -0.09 9.65 -39.06 -0.38 -0.47 16 17 C 0.03 0.01 5.87 -104.95 -0.62 -0.61 16 18 C 0.02 0.02 7.02 -36.55 -0.26 -0.24 16 19 C -0.18 0.02 10.26 -39.38 -0.40 -0.38 16 20 C -0.17 -0.05 10.78 -39.82 -0.43 -0.48 16 21 C -0.04 -0.02 6.21 -35.52 -0.22 -0.24 16 22 C -0.03 0.03 2.98 36.01 0.11 0.14 16 23 O -0.52 -0.21 12.88 -35.23 -0.45 -0.66 16 24 Si 0.70 -0.68 32.11 -169.99 -5.46 -6.13 16 25 O -0.16 -0.20 8.79 4.75 0.04 -0.16 16 26 C -0.12 0.19 9.48 -39.60 -0.38 -0.19 16 27 C -0.06 0.12 9.47 -39.62 -0.38 -0.26 16 28 C -0.13 0.26 7.15 -25.92 -0.19 0.07 16 29 H 0.06 -0.07 8.13 -51.93 -0.42 -0.49 16 30 H 0.10 -0.34 8.14 -51.93 -0.42 -0.76 16 31 H 0.06 -0.06 8.13 -51.93 -0.42 -0.48 16 32 H 0.09 -0.17 8.09 -51.93 -0.42 -0.59 16 33 H 0.09 -0.19 8.14 -51.93 -0.42 -0.61 16 34 H 0.40 -1.42 6.73 -40.82 -0.27 -1.69 16 35 H 0.40 -0.71 9.06 45.56 0.41 -0.30 16 36 H 0.14 0.01 7.90 -52.48 -0.41 -0.40 16 37 H 0.16 -0.38 7.24 -52.49 -0.38 -0.76 16 38 H 0.16 -0.14 8.06 -52.49 -0.42 -0.56 16 39 H 0.14 -0.33 7.96 -51.93 -0.41 -0.74 16 40 H 0.38 -0.83 8.70 45.56 0.40 -0.44 16 41 H -0.25 -0.38 7.11 56.52 0.40 0.02 16 42 H -0.25 -0.47 7.11 56.52 0.40 -0.07 16 43 H 0.14 -0.53 6.95 -52.48 -0.37 -0.90 16 44 H 0.14 -0.66 6.38 -52.49 -0.33 -0.99 16 45 H 0.09 -0.23 8.14 -51.93 -0.42 -0.66 16 46 H 0.10 -0.16 7.42 -51.93 -0.39 -0.54 16 LS Contribution 399.79 15.07 6.02 6.02 Total: 0.00 -11.26 399.79 -9.91 -21.17 By element: Atomic # 1 Polarization: -7.53 SS G_CDS: -4.72 Total: -12.25 kcal Atomic # 6 Polarization: 2.32 SS G_CDS: -3.64 Total: -1.32 kcal Atomic # 7 Polarization: 0.87 SS G_CDS: -0.29 Total: 0.58 kcal Atomic # 8 Polarization: -6.25 SS G_CDS: -1.84 Total: -8.08 kcal Atomic # 14 Polarization: -0.68 SS G_CDS: -5.46 Total: -6.13 kcal Total LS contribution 6.02 Total: 6.02 kcal Total: -11.26 -9.91 -21.17 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10970304_12807986.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -90.144 kcal (2) G-P(sol) polarization free energy of solvation -11.261 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -101.405 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.914 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.175 kcal (6) G-S(sol) free energy of system = (1) + (5) -111.319 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.18 seconds