Wall clock time and date at job start Sat Mar 6 2021 15:34:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45197 * 1 3 3 C 1.34222 * 116.99724 * 2 1 4 4 O 1.20832 * 120.00340 * 359.97438 * 3 2 1 5 5 C 1.50703 * 120.00165 * 179.97438 * 3 2 1 6 6 H 1.08998 * 112.84885 * 311.20069 * 5 3 2 7 7 C 1.53958 * 113.66445 * 82.43621 * 5 3 2 8 8 C 1.53777 * 87.01755 * 139.93731 * 7 5 3 9 9 H 1.09002 * 113.61841 * 89.22906 * 8 7 5 10 10 N 1.46503 * 113.61263 * 220.04628 * 8 7 5 11 11 C 1.34772 * 120.00224 * 254.13329 * 10 8 7 12 12 O 1.21571 * 120.00207 * 0.02562 * 11 10 8 13 13 C 1.47673 * 120.00184 * 179.97438 * 11 10 8 14 14 C 1.40006 * 120.44910 * 354.03824 * 13 11 10 15 15 N 1.31308 * 121.37022 * 179.97438 * 14 13 11 16 16 C 1.32824 * 121.89218 * 359.97438 * 15 14 13 17 17 N 1.37160 * 132.96118 * 180.02562 * 16 15 14 18 18 C 1.36945 * 110.11073 * 179.97438 * 17 16 15 19 19 C 1.34180 * 109.95516 * 0.02562 * 18 17 16 20 20 C 1.50694 * 126.60045 * 179.73653 * 19 18 17 21 21 O 1.42905 * 109.47081 * 255.02203 * 20 19 18 22 22 Si 1.86304 * 109.47015 * 15.01947 * 20 19 18 23 23 C 1.41012 * 120.08428 * 0.02562 * 16 15 14 24 24 C 1.39289 * 119.61881 * 359.97438 * 23 16 15 25 25 C 1.50696 * 121.02916 * 180.02562 * 24 23 16 26 26 C 1.53778 * 87.17471 * 334.63724 * 8 7 5 27 27 H 1.08997 * 109.47644 * 60.00278 * 1 2 3 28 28 H 1.09009 * 109.47105 * 180.02562 * 1 2 3 29 29 H 1.09002 * 109.47236 * 300.00094 * 1 2 3 30 30 H 1.08995 * 113.61697 * 25.41499 * 7 5 3 31 31 H 1.09001 * 113.66644 * 254.46422 * 7 5 3 32 32 H 0.97009 * 119.99884 * 74.14023 * 10 8 7 33 33 H 1.07997 * 119.31504 * 359.97438 * 14 13 11 34 34 H 0.96997 * 124.93860 * 0.02562 * 17 16 15 35 35 H 1.07997 * 125.02058 * 179.97438 * 18 17 16 36 36 H 1.08998 * 109.47693 * 135.01576 * 20 19 18 37 37 H 0.96700 * 113.99523 * 59.99936 * 21 20 19 38 38 H 1.48505 * 109.99998 * 180.02562 * 22 20 19 39 39 H 1.48499 * 109.99861 * 301.31826 * 22 20 19 40 40 H 1.08994 * 109.47421 * 263.69133 * 25 24 23 41 41 H 1.09004 * 109.47612 * 23.69435 * 25 24 23 42 42 H 1.09005 * 109.47105 * 143.69365 * 25 24 23 43 43 H 1.08995 * 113.61768 * 139.94027 * 26 8 7 44 44 H 1.09001 * 113.61468 * 270.84246 * 26 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1960 0.0000 4 8 1.4032 2.2093 -0.0005 5 6 3.5662 1.2749 0.0006 6 1 4.0233 0.6366 0.7567 7 6 4.1936 1.1217 -1.3970 8 6 5.1813 2.2266 -0.9866 9 1 6.0815 1.8495 -0.5013 10 7 5.4708 3.1826 -2.0584 11 6 6.6574 3.1412 -2.6959 12 8 7.4875 2.3103 -2.3820 13 6 6.9490 4.1045 -3.7766 14 6 5.9575 4.9822 -4.2313 15 7 6.1971 5.8462 -5.1907 16 6 7.3861 5.9326 -5.7764 17 7 7.8795 6.7310 -6.7766 18 6 9.1913 6.4228 -7.0211 19 6 9.5888 5.4336 -6.2063 20 6 10.9561 4.8017 -6.1611 21 8 10.9052 3.5118 -6.7741 22 14 12.1684 5.8781 -7.0790 23 6 8.4361 5.0821 -5.3733 24 6 8.2186 4.1531 -4.3586 25 6 9.3182 3.2291 -3.9025 26 6 4.1076 2.7143 0.0004 27 1 -0.3634 0.5138 -0.8899 28 1 -0.3634 -1.0277 0.0005 29 1 -0.3634 0.5139 0.8900 30 1 3.5269 1.4115 -2.2091 31 1 4.6656 0.1529 -1.5609 32 1 4.8083 3.8454 -2.3091 33 1 4.9752 4.9479 -3.7838 34 1 7.3733 7.4149 -7.2422 35 1 9.8134 6.9042 -7.7610 36 1 11.2748 4.6987 -5.1238 37 1 10.6285 3.5274 -7.7005 38 1 13.5207 5.2655 -7.0423 39 1 11.7284 6.0523 -8.4866 40 1 9.2214 2.2701 -4.4113 41 1 10.2860 3.6706 -4.1405 42 1 9.2427 3.0782 -2.8256 43 1 4.5102 3.0294 0.9630 44 1 3.4173 3.4404 -0.4290 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10970304_12890568.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:34:55 Heat of formation + Delta-G solvation = -43.017763 kcal Electronic energy + Delta-G solvation = -29810.675441 eV Core-core repulsion = 25503.722993 eV Total energy + Delta-G solvation = -4306.952448 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 346.141 amu Computer time = 0.97 seconds Orbital eigenvalues (eV) -42.85185 -41.92954 -40.89222 -39.44333 -38.53692 -37.82462 -37.29711 -35.15460 -34.50996 -31.94758 -31.07489 -29.36767 -28.79545 -27.03305 -26.91459 -26.34926 -24.66747 -23.96017 -22.49110 -21.72954 -20.84235 -20.60887 -19.35530 -18.92203 -18.63253 -17.92219 -17.69787 -17.47145 -17.35252 -16.84432 -16.57604 -16.49246 -16.14304 -15.83508 -15.57885 -15.44455 -15.14931 -14.70762 -14.48674 -14.28637 -14.06886 -13.95865 -13.68466 -13.66323 -13.56899 -13.43302 -13.22400 -13.02075 -12.97797 -12.56185 -12.44526 -12.30095 -11.84705 -11.82003 -11.77969 -11.35202 -11.18379 -11.03541 -10.48584 -10.22088 -10.09376 -9.59194 -9.14370 -5.01288 -0.22822 -0.05261 1.15974 1.22521 1.36762 1.49785 1.60374 1.64954 1.90102 1.92964 2.16667 2.84132 3.17973 3.23849 3.30919 3.38120 3.50941 3.59013 3.60123 3.68731 3.73592 3.78238 3.98213 4.08503 4.16526 4.21452 4.24131 4.27800 4.39211 4.47000 4.49410 4.55963 4.59871 4.65624 4.73886 4.80922 4.82115 4.98067 5.05036 5.06763 5.20733 5.37185 5.39262 5.45181 5.57124 5.77891 6.09273 6.43899 6.45197 6.73693 6.85824 7.22426 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.357 6.357 3 C 0.472 3.528 4 O -0.505 6.505 5 C -0.109 4.109 6 H 0.132 0.868 7 C -0.134 4.134 8 C 0.128 3.872 9 H 0.126 0.874 10 N -0.718 5.718 11 C 0.574 3.426 12 O -0.527 6.527 13 C -0.235 4.235 14 C 0.181 3.819 15 N -0.504 5.504 16 C 0.308 3.692 17 N -0.569 5.569 18 C 0.067 3.933 19 C -0.176 4.176 20 C -0.044 4.044 21 O -0.526 6.526 22 Si 0.685 3.315 23 C -0.149 4.149 24 C 0.086 3.914 25 C -0.124 4.124 26 C -0.127 4.127 27 H 0.063 0.937 28 H 0.103 0.897 29 H 0.064 0.936 30 H 0.091 0.909 31 H 0.090 0.910 32 H 0.401 0.599 33 H 0.162 0.838 34 H 0.425 0.575 35 H 0.183 0.817 36 H 0.120 0.880 37 H 0.374 0.626 38 H -0.254 1.254 39 H -0.258 1.258 40 H 0.086 0.914 41 H 0.070 0.930 42 H 0.097 0.903 43 H 0.089 0.911 44 H 0.103 0.897 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.021 2.738 -0.900 2.882 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.273 6.273 3 C 0.315 3.685 4 O -0.393 6.393 5 C -0.129 4.129 6 H 0.150 0.850 7 C -0.173 4.173 8 C 0.023 3.977 9 H 0.144 0.856 10 N -0.370 5.370 11 C 0.363 3.637 12 O -0.405 6.405 13 C -0.243 4.243 14 C 0.013 3.987 15 N -0.217 5.217 16 C 0.075 3.925 17 N -0.175 5.175 18 C -0.060 4.060 19 C -0.184 4.184 20 C -0.154 4.154 21 O -0.331 6.331 22 Si 0.585 3.415 23 C -0.156 4.156 24 C 0.078 3.922 25 C -0.179 4.179 26 C -0.165 4.165 27 H 0.082 0.918 28 H 0.122 0.878 29 H 0.083 0.917 30 H 0.110 0.890 31 H 0.109 0.891 32 H 0.237 0.763 33 H 0.179 0.821 34 H 0.264 0.736 35 H 0.200 0.800 36 H 0.137 0.863 37 H 0.222 0.778 38 H -0.178 1.178 39 H -0.183 1.183 40 H 0.105 0.895 41 H 0.088 0.912 42 H 0.115 0.885 43 H 0.108 0.892 44 H 0.121 0.879 Dipole moment (debyes) X Y Z Total from point charges 0.472 3.000 -1.179 3.258 hybrid contribution -1.096 -0.605 -0.798 1.484 sum -0.624 2.396 -1.977 3.168 Atomic orbital electron populations 1.23325 0.75940 1.04029 1.02696 1.86520 1.23718 1.33293 1.83758 1.23488 0.91599 0.81419 0.72034 1.90685 1.66997 1.36427 1.45142 1.22347 0.87652 1.01021 1.01884 0.85028 1.23495 0.97985 1.01300 0.94525 1.22427 0.97833 0.89460 0.87950 0.85646 1.45845 1.17454 1.36314 1.37387 1.17901 0.81534 0.83271 0.81033 1.90760 1.45906 1.37773 1.66030 1.20418 0.96134 1.03930 1.03778 1.22514 0.98026 0.88074 0.90131 1.66440 1.19991 1.23999 1.11285 1.18503 0.90411 0.92162 0.91418 1.41517 1.10764 1.33420 1.31800 1.21794 0.84145 0.98865 1.01191 1.20619 0.96164 1.01106 1.00490 1.24462 0.96921 0.89599 1.04437 1.86639 1.89987 1.26942 1.29577 0.95179 0.78396 0.87143 0.80759 1.19458 0.94993 1.00425 1.00716 1.19927 0.93550 0.90472 0.88245 1.21181 0.94911 0.97930 1.03913 1.23381 0.97152 0.94924 1.01027 0.91775 0.87837 0.91720 0.89016 0.89092 0.76301 0.82096 0.73592 0.79982 0.86260 0.77839 1.17821 1.18288 0.89542 0.91172 0.88457 0.89189 0.87852 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.55 101.05 1.07 1.05 16 2 O -0.36 -0.48 10.56 -39.24 -0.41 -0.90 16 3 C 0.47 0.70 7.49 36.01 0.27 0.97 16 4 O -0.51 -2.08 15.65 -18.76 -0.29 -2.37 16 5 C -0.11 0.15 4.26 -90.87 -0.39 -0.23 16 6 H 0.13 -0.41 8.14 -51.93 -0.42 -0.83 16 7 C -0.13 0.20 7.44 -25.83 -0.19 0.01 16 8 C 0.13 -0.17 4.21 -67.12 -0.28 -0.45 16 9 H 0.13 -0.08 7.50 -51.93 -0.39 -0.47 16 10 N -0.72 0.65 5.31 -54.02 -0.29 0.36 16 11 C 0.57 1.12 7.72 -12.41 -0.10 1.03 16 12 O -0.53 -2.46 13.11 5.30 0.07 -2.39 16 13 C -0.24 -0.46 5.89 -104.82 -0.62 -1.08 16 14 C 0.18 0.17 10.67 -17.11 -0.18 -0.02 16 15 N -0.50 -1.27 10.37 -11.96 -0.12 -1.40 16 16 C 0.31 0.65 8.42 -155.71 -1.31 -0.66 16 17 N -0.57 0.55 6.04 -12.12 -0.07 0.48 16 18 C 0.07 -0.13 10.44 -16.70 -0.17 -0.31 16 19 C -0.18 0.01 5.57 -102.73 -0.57 -0.57 16 20 C -0.04 0.03 2.06 36.00 0.07 0.11 16 21 O -0.53 -0.41 12.88 -35.23 -0.45 -0.86 16 22 Si 0.68 -1.54 30.83 -169.99 -5.24 -6.78 16 23 C -0.15 -0.34 6.16 -105.13 -0.65 -0.99 16 24 C 0.09 0.24 5.98 -103.67 -0.62 -0.38 16 25 C -0.12 -0.32 8.68 36.00 0.31 -0.01 16 26 C -0.13 0.24 7.15 -25.92 -0.19 0.06 16 27 H 0.06 -0.04 8.13 -51.93 -0.42 -0.46 16 28 H 0.10 -0.30 8.14 -51.92 -0.42 -0.72 16 29 H 0.06 -0.04 8.13 -51.93 -0.42 -0.46 16 30 H 0.09 -0.11 8.10 -51.93 -0.42 -0.53 16 31 H 0.09 -0.14 8.14 -51.93 -0.42 -0.56 16 32 H 0.40 -1.21 6.79 -40.82 -0.28 -1.49 16 33 H 0.16 -0.40 6.43 -52.49 -0.34 -0.74 16 34 H 0.43 -1.47 8.96 -40.82 -0.37 -1.83 16 35 H 0.18 -0.92 6.28 -52.49 -0.33 -1.25 16 36 H 0.12 -0.10 6.05 -51.93 -0.31 -0.41 16 37 H 0.37 -0.77 8.70 45.56 0.40 -0.37 16 38 H -0.25 -0.36 7.11 56.52 0.40 0.04 16 39 H -0.26 0.29 7.00 56.52 0.40 0.69 16 40 H 0.09 0.30 8.14 -51.93 -0.42 -0.12 16 41 H 0.07 0.11 5.06 -51.93 -0.26 -0.15 16 42 H 0.10 0.34 5.96 -51.93 -0.31 0.03 16 43 H 0.09 -0.24 8.14 -51.93 -0.42 -0.66 16 44 H 0.10 -0.13 7.40 -51.93 -0.38 -0.51 16 LS Contribution 365.77 15.07 5.51 5.51 Total: 0.00 -10.63 365.77 -10.01 -20.64 By element: Atomic # 1 Polarization: -5.64 SS G_CDS: -5.16 Total: -10.80 kcal Atomic # 6 Polarization: 2.06 SS G_CDS: -3.54 Total: -1.48 kcal Atomic # 7 Polarization: -0.07 SS G_CDS: -0.48 Total: -0.56 kcal Atomic # 8 Polarization: -5.44 SS G_CDS: -1.09 Total: -6.53 kcal Atomic # 14 Polarization: -1.54 SS G_CDS: -5.24 Total: -6.78 kcal Total LS contribution 5.51 Total: 5.51 kcal Total: -10.63 -10.01 -20.64 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10970304_12890568.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -22.382 kcal (2) G-P(sol) polarization free energy of solvation -10.630 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -33.012 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.005 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.635 kcal (6) G-S(sol) free energy of system = (1) + (5) -43.018 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.97 seconds