Wall clock time and date at job start Sat Mar 6 2021 15:34:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45195 * 1 3 3 C 1.34230 * 117.00276 * 2 1 4 4 O 1.20823 * 119.99739 * 359.97438 * 3 2 1 5 5 C 1.50697 * 119.99951 * 180.02562 * 3 2 1 6 6 H 1.08997 * 112.85525 * 48.79768 * 5 3 2 7 7 C 1.53785 * 113.61325 * 180.02562 * 5 3 2 8 8 C 1.53787 * 87.08200 * 140.06285 * 7 5 3 9 9 H 1.08998 * 113.61536 * 89.19778 * 8 7 5 10 10 N 1.46497 * 113.61119 * 220.01881 * 8 7 5 11 11 C 1.34776 * 119.99858 * 205.00121 * 10 8 7 12 12 O 1.21566 * 120.00116 * 359.97438 * 11 10 8 13 13 C 1.47717 * 120.00112 * 179.97438 * 11 10 8 14 14 C 1.39714 * 120.02657 * 179.97438 * 13 11 10 15 15 C 1.37667 * 119.97428 * 180.02562 * 14 13 11 16 16 C 1.39498 * 120.02474 * 0.02562 * 15 14 13 17 17 C 1.48286 * 119.97297 * 179.97438 * 16 15 14 18 18 C 1.39399 * 120.12756 * 179.97438 * 17 16 15 19 19 C 1.37998 * 119.87391 * 179.97438 * 18 17 16 20 20 C 1.38337 * 120.12291 * 359.97326 * 19 18 17 21 21 C 1.50706 * 119.86668 * 180.02562 * 20 19 18 22 22 O 1.42903 * 109.47186 * 65.00384 * 21 20 19 23 23 Si 1.86302 * 109.46768 * 185.00064 * 21 20 19 24 24 C 1.38327 * 120.25768 * 0.28033 * 20 19 18 25 25 C 1.37998 * 120.13031 * 359.48861 * 24 20 19 26 26 C 1.39505 * 120.05290 * 0.25174 * 16 15 14 27 27 C 1.37661 * 120.01837 * 359.44618 * 26 16 15 28 28 C 1.53777 * 87.07736 * 334.56670 * 8 7 5 29 29 H 1.09004 * 109.46936 * 59.99898 * 1 2 3 30 30 H 1.08992 * 109.47447 * 180.02562 * 1 2 3 31 31 H 1.09003 * 109.47173 * 300.00299 * 1 2 3 32 32 H 1.08997 * 113.61729 * 25.51137 * 7 5 3 33 33 H 1.09007 * 113.61137 * 254.60516 * 7 5 3 34 34 H 0.96999 * 120.00138 * 24.99413 * 10 8 7 35 35 H 1.07997 * 120.01008 * 0.02562 * 14 13 11 36 36 H 1.07996 * 119.98238 * 179.97438 * 15 14 13 37 37 H 1.08002 * 120.06246 * 359.95313 * 18 17 16 38 38 H 1.07999 * 119.94051 * 180.02562 * 19 18 17 39 39 H 1.08992 * 109.47155 * 304.99981 * 21 20 19 40 40 H 0.96698 * 113.99763 * 59.99746 * 22 21 20 41 41 H 1.48504 * 109.99775 * 180.02562 * 23 21 20 42 42 H 1.48498 * 110.00038 * 301.31999 * 23 21 20 43 43 H 1.08008 * 119.93523 * 179.72420 * 24 20 19 44 44 H 1.07996 * 120.07045 * 180.23104 * 25 24 20 45 45 H 1.07994 * 119.98471 * 179.72652 * 26 16 15 46 46 H 1.08000 * 120.01110 * 180.25137 * 27 26 16 47 47 H 1.09003 * 113.61361 * 139.98767 * 28 8 7 48 48 H 1.09008 * 113.61417 * 270.88357 * 28 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4519 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 -0.0005 5 6 3.5663 1.2748 -0.0006 6 1 4.0234 0.6363 -0.7566 7 6 4.1078 2.7141 0.0001 8 6 5.1829 2.2255 0.9853 9 1 6.0823 1.8487 0.4985 10 7 5.4738 3.1806 2.0574 11 6 6.6728 3.1586 2.6724 12 8 7.5128 2.3460 2.3378 13 6 6.9664 4.1219 3.7531 14 6 8.2090 4.0992 4.3913 15 6 8.4813 4.9972 5.3987 16 6 7.5169 5.9291 5.7826 17 6 7.8112 6.8954 6.8682 18 6 6.8500 7.8284 7.2540 19 6 7.1293 8.7249 8.2653 20 6 8.3601 8.6985 8.8962 21 6 8.6588 9.6798 10.0002 22 8 7.7960 9.4248 11.1105 23 14 10.4329 9.4905 10.5362 24 6 9.3197 7.7784 8.5140 25 6 9.0500 6.8739 7.5072 26 6 6.2737 5.9489 5.1500 27 6 6.0015 5.0560 4.1382 28 6 4.1936 1.1219 1.3951 29 1 -0.3633 0.5139 -0.8900 30 1 -0.3634 -1.0276 0.0005 31 1 -0.3634 0.5139 0.8900 32 1 3.4181 3.4399 0.4310 33 1 4.5093 3.0300 -0.9628 34 1 4.8035 3.8288 2.3246 35 1 8.9556 3.3776 4.0945 36 1 9.4416 4.9795 5.8924 37 1 5.8887 7.8498 6.7622 38 1 6.3852 9.4479 8.5654 39 1 8.4949 10.6948 9.6384 40 1 7.8880 8.5378 11.4845 41 1 10.7399 10.4524 11.6252 42 1 10.6774 8.1018 11.0020 43 1 10.2806 7.7653 9.0070 44 1 9.7985 6.1535 7.2121 45 1 5.5263 6.6680 5.4511 46 1 5.0405 5.0741 3.6457 47 1 4.6642 0.1523 1.5586 48 1 3.5273 1.4124 2.2075 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10970304_13158362.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:34:58 Heat of formation + Delta-G solvation = -67.060511 kcal Electronic energy + Delta-G solvation = -30796.305013 eV Core-core repulsion = 26362.709534 eV Total energy + Delta-G solvation = -4433.595479 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 368.150 amu Computer time = 1.12 seconds Orbital eigenvalues (eV) -42.02318 -41.37770 -40.75843 -39.71007 -38.83018 -37.65377 -37.32961 -34.83539 -33.92486 -32.64859 -31.66163 -30.93330 -29.39320 -27.45514 -26.96115 -26.56643 -24.75305 -24.51142 -22.85495 -22.63250 -22.04727 -21.39560 -20.78219 -19.25591 -18.93827 -18.49691 -17.99664 -17.79854 -17.41420 -17.07556 -16.70267 -16.49400 -16.32355 -16.08461 -15.90620 -15.82165 -15.51814 -15.10587 -15.01116 -14.98699 -14.54267 -14.42488 -14.26884 -14.16346 -14.10458 -13.74897 -13.61210 -13.53142 -13.22836 -13.04961 -12.83937 -12.65979 -12.60544 -12.37837 -12.08070 -11.99468 -11.89967 -11.81237 -11.58543 -11.39364 -10.95895 -10.79866 -10.62609 -10.16889 -10.13206 -10.04410 -9.13983 -5.00741 -0.73185 0.27227 0.31618 0.46439 1.12110 1.22855 1.54297 1.60796 1.80570 1.92010 2.11346 2.55428 2.94408 3.13377 3.21266 3.29351 3.38212 3.50673 3.54630 3.60257 3.64674 3.72533 3.76663 3.88624 3.92497 3.95717 4.13731 4.16202 4.19358 4.21198 4.26821 4.37400 4.44184 4.46501 4.50483 4.55344 4.56902 4.61285 4.69212 4.76844 4.78901 4.83443 4.96672 4.97246 5.07129 5.12521 5.20593 5.33770 5.34515 5.40121 5.41376 5.57576 5.72978 5.83549 6.34020 6.38314 6.69905 7.13127 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.357 6.357 3 C 0.472 3.528 4 O -0.505 6.505 5 C -0.109 4.109 6 H 0.132 0.868 7 C -0.127 4.127 8 C 0.126 3.874 9 H 0.126 0.874 10 N -0.717 5.717 11 C 0.562 3.438 12 O -0.532 6.532 13 C -0.138 4.138 14 C -0.053 4.053 15 C -0.118 4.118 16 C -0.017 4.017 17 C -0.049 4.049 18 C -0.105 4.105 19 C -0.090 4.090 20 C -0.112 4.112 21 C -0.076 4.076 22 O -0.529 6.529 23 Si 0.686 3.314 24 C -0.116 4.116 25 C -0.100 4.100 26 C -0.118 4.118 27 C -0.081 4.081 28 C -0.134 4.134 29 H 0.064 0.936 30 H 0.104 0.896 31 H 0.063 0.937 32 H 0.103 0.897 33 H 0.090 0.910 34 H 0.402 0.598 35 H 0.140 0.860 36 H 0.135 0.865 37 H 0.129 0.871 38 H 0.129 0.871 39 H 0.119 0.881 40 H 0.376 0.624 41 H -0.257 1.257 42 H -0.260 1.260 43 H 0.130 0.870 44 H 0.132 0.868 45 H 0.133 0.867 46 H 0.128 0.872 47 H 0.091 0.909 48 H 0.091 0.909 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.282 0.290 -0.975 1.056 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.273 6.273 3 C 0.315 3.685 4 O -0.392 6.392 5 C -0.129 4.129 6 H 0.150 0.850 7 C -0.165 4.165 8 C 0.021 3.979 9 H 0.144 0.856 10 N -0.368 5.368 11 C 0.350 3.650 12 O -0.409 6.409 13 C -0.141 4.141 14 C -0.072 4.072 15 C -0.136 4.136 16 C -0.017 4.017 17 C -0.049 4.049 18 C -0.123 4.123 19 C -0.108 4.108 20 C -0.112 4.112 21 C -0.186 4.186 22 O -0.335 6.335 23 Si 0.587 3.413 24 C -0.133 4.133 25 C -0.118 4.118 26 C -0.136 4.136 27 C -0.100 4.100 28 C -0.173 4.173 29 H 0.083 0.917 30 H 0.122 0.878 31 H 0.082 0.918 32 H 0.121 0.879 33 H 0.108 0.892 34 H 0.238 0.762 35 H 0.158 0.842 36 H 0.153 0.847 37 H 0.147 0.853 38 H 0.147 0.853 39 H 0.137 0.863 40 H 0.224 0.776 41 H -0.182 1.182 42 H -0.185 1.185 43 H 0.148 0.852 44 H 0.150 0.850 45 H 0.151 0.849 46 H 0.146 0.854 47 H 0.109 0.891 48 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges 0.450 0.419 -0.685 0.920 hybrid contribution -1.578 -0.366 0.641 1.742 sum -1.128 0.053 -0.044 1.130 Atomic orbital electron populations 1.23328 0.75898 1.04057 1.02703 1.86521 1.23749 1.33261 1.83741 1.23470 0.91569 0.81436 0.72042 1.90681 1.66987 1.36436 1.45144 1.22309 0.87709 1.00995 1.01851 0.84972 1.23390 0.97103 0.94949 1.01052 1.22461 0.97894 0.89545 0.88031 0.85589 1.45860 1.16302 1.37113 1.37532 1.18305 0.81707 0.83400 0.81584 1.90799 1.46483 1.38882 1.64751 1.19959 0.96271 0.98621 0.99236 1.21233 0.95524 0.97123 0.93304 1.21248 0.99597 0.95111 0.97650 1.18999 0.93918 0.94411 0.94359 1.18826 0.94562 0.95774 0.95735 1.21317 0.99047 0.94729 0.97162 1.20980 0.96334 0.98558 0.94936 1.20392 0.94974 0.97568 0.98268 1.25054 1.06151 1.00935 0.86482 1.86612 1.61972 1.37723 1.47217 0.94954 0.78062 0.80839 0.87443 1.21007 0.98833 0.95486 0.98006 1.21223 0.96234 0.98700 0.95642 1.21164 0.96530 0.99533 0.96383 1.21205 0.98367 0.94062 0.96368 1.23461 0.97944 1.01273 0.94617 0.91695 0.87809 0.91781 0.87897 0.89162 0.76151 0.84182 0.84726 0.85287 0.85282 0.86298 0.77612 1.18160 1.18496 0.85233 0.85047 0.84895 0.85406 0.89063 0.89017 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 101.05 1.07 1.04 16 2 O -0.36 -0.41 10.56 -39.26 -0.41 -0.83 16 3 C 0.47 0.62 7.49 36.00 0.27 0.89 16 4 O -0.51 -1.98 15.65 -18.75 -0.29 -2.27 16 5 C -0.11 0.17 4.26 -90.96 -0.39 -0.22 16 6 H 0.13 -0.42 8.14 -51.93 -0.42 -0.85 16 7 C -0.13 0.25 7.15 -25.91 -0.19 0.06 16 8 C 0.13 -0.16 4.24 -67.12 -0.28 -0.44 16 9 H 0.13 -0.05 7.46 -51.93 -0.39 -0.44 16 10 N -0.72 0.64 5.30 -54.00 -0.29 0.36 16 11 C 0.56 1.05 7.77 -12.39 -0.10 0.95 16 12 O -0.53 -2.84 15.93 5.31 0.08 -2.75 16 13 C -0.14 -0.10 5.88 -104.92 -0.62 -0.72 16 14 C -0.05 -0.04 9.58 -39.24 -0.38 -0.42 16 15 C -0.12 0.03 9.41 -39.32 -0.37 -0.34 16 16 C -0.02 0.00 5.88 -104.82 -0.62 -0.61 16 17 C -0.05 0.01 5.88 -104.90 -0.62 -0.61 16 18 C -0.10 0.06 9.43 -39.24 -0.37 -0.31 16 19 C -0.09 0.02 9.67 -39.63 -0.38 -0.36 16 20 C -0.11 0.05 5.36 -104.55 -0.56 -0.51 16 21 C -0.08 0.05 2.80 36.01 0.10 0.15 16 22 O -0.53 -0.46 12.83 -35.23 -0.45 -0.91 16 23 Si 0.69 -0.91 29.86 -169.99 -5.08 -5.98 16 24 C -0.12 0.11 8.65 -39.64 -0.34 -0.24 16 25 C -0.10 0.08 9.43 -39.24 -0.37 -0.29 16 26 C -0.12 0.12 9.41 -39.32 -0.37 -0.25 16 27 C -0.08 0.10 9.52 -39.24 -0.37 -0.28 16 28 C -0.13 0.21 7.43 -25.92 -0.19 0.02 16 29 H 0.06 -0.05 8.13 -51.93 -0.42 -0.47 16 30 H 0.10 -0.32 8.14 -51.93 -0.42 -0.74 16 31 H 0.06 -0.05 8.13 -51.93 -0.42 -0.47 16 32 H 0.10 -0.14 7.41 -51.93 -0.39 -0.52 16 33 H 0.09 -0.24 8.14 -51.92 -0.42 -0.66 16 34 H 0.40 -1.24 6.74 -40.82 -0.28 -1.52 16 35 H 0.14 0.12 7.64 -52.49 -0.40 -0.28 16 36 H 0.14 -0.29 6.19 -52.49 -0.32 -0.62 16 37 H 0.13 -0.30 6.19 -52.49 -0.33 -0.62 16 38 H 0.13 -0.12 8.06 -52.49 -0.42 -0.54 16 39 H 0.12 -0.17 7.96 -51.93 -0.41 -0.58 16 40 H 0.38 -0.70 8.70 45.56 0.40 -0.30 16 41 H -0.26 -0.54 7.11 56.52 0.40 -0.14 16 42 H -0.26 -0.14 7.01 56.52 0.40 0.26 16 43 H 0.13 -0.32 4.82 -52.48 -0.25 -0.57 16 44 H 0.13 -0.34 6.19 -52.49 -0.33 -0.66 16 45 H 0.13 -0.38 6.19 -52.49 -0.32 -0.71 16 46 H 0.13 -0.49 6.39 -52.49 -0.34 -0.82 16 47 H 0.09 -0.15 8.14 -51.93 -0.42 -0.57 16 48 H 0.09 -0.12 8.10 -51.92 -0.42 -0.54 16 LS Contribution 400.92 15.07 6.04 6.04 Total: 0.00 -9.82 400.92 -11.41 -21.23 By element: Atomic # 1 Polarization: -6.45 SS G_CDS: -5.94 Total: -12.38 kcal Atomic # 6 Polarization: 2.57 SS G_CDS: -5.07 Total: -2.50 kcal Atomic # 7 Polarization: 0.64 SS G_CDS: -0.29 Total: 0.36 kcal Atomic # 8 Polarization: -5.68 SS G_CDS: -1.08 Total: -6.76 kcal Atomic # 14 Polarization: -0.91 SS G_CDS: -5.08 Total: -5.98 kcal Total LS contribution 6.04 Total: 6.04 kcal Total: -9.82 -11.41 -21.23 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10970304_13158362.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -45.833 kcal (2) G-P(sol) polarization free energy of solvation -9.822 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -55.654 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.406 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.228 kcal (6) G-S(sol) free energy of system = (1) + (5) -67.061 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.12 seconds