Wall clock time and date at job start Sat Mar 6 2021 15:35:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45201 * 1 3 3 C 1.34228 * 117.00112 * 2 1 4 4 O 1.20819 * 120.00352 * 0.02562 * 3 2 1 5 5 C 1.50703 * 119.99786 * 179.97438 * 3 2 1 6 6 H 1.08998 * 112.85023 * 311.20124 * 5 3 2 7 7 C 1.53780 * 113.61551 * 82.50457 * 5 3 2 8 8 C 1.53774 * 87.08247 * 139.97949 * 7 5 3 9 9 H 1.09002 * 113.69023 * 89.12634 * 8 7 5 10 10 N 1.46497 * 113.61737 * 220.01988 * 8 7 5 11 11 C 1.34780 * 120.00042 * 252.50187 * 10 8 7 12 12 O 1.21645 * 120.00265 * 359.97438 * 11 10 8 13 13 C 1.47057 * 120.00073 * 179.97438 * 11 10 8 14 14 C 1.35863 * 125.43089 * 180.02562 * 13 11 10 15 15 C 1.41593 * 107.73352 * 179.97438 * 14 13 11 16 16 C 1.40057 * 133.37988 * 179.97438 * 15 14 13 17 17 C 1.36480 * 119.83105 * 180.02562 * 16 15 14 18 18 C 1.38903 * 120.61116 * 0.02562 * 17 16 15 19 19 C 1.50699 * 119.67293 * 179.97438 * 18 17 16 20 20 O 1.42892 * 109.47249 * 120.00388 * 19 18 17 21 21 Si 1.86298 * 109.47032 * 359.97438 * 19 18 17 22 22 C 1.37707 * 120.64763 * 0.24011 * 18 17 16 23 23 C 1.39189 * 119.81444 * 359.48873 * 22 18 17 24 24 N 1.37479 * 133.19384 * 180.14281 * 23 22 18 25 25 C 1.53780 * 87.08417 * 334.56914 * 8 7 5 26 26 H 1.08998 * 109.47132 * 300.00032 * 1 2 3 27 27 H 1.09002 * 109.46493 * 59.99624 * 1 2 3 28 28 H 1.08999 * 109.47114 * 179.97438 * 1 2 3 29 29 H 1.09001 * 113.61202 * 25.43142 * 7 5 3 30 30 H 1.09002 * 113.61641 * 254.53267 * 7 5 3 31 31 H 0.96999 * 120.00314 * 72.49215 * 10 8 7 32 32 H 1.08003 * 126.13351 * 359.97438 * 14 13 11 33 33 H 1.08003 * 120.08636 * 359.97438 * 16 15 14 34 34 H 1.07998 * 119.69425 * 179.97438 * 17 16 15 35 35 H 1.09004 * 109.46453 * 240.00456 * 19 18 17 36 36 H 0.96703 * 114.00176 * 299.99748 * 20 19 18 37 37 H 1.48506 * 109.99834 * 58.68765 * 21 19 18 38 38 H 1.48502 * 110.00011 * 180.02562 * 21 19 18 39 39 H 1.08001 * 120.09491 * 179.72123 * 22 18 17 40 40 H 0.97004 * 125.60753 * 0.32432 * 24 23 22 41 41 H 1.08996 * 113.61390 * 139.97903 * 25 8 7 42 42 H 1.08997 * 113.61293 * 270.89004 * 25 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4035 2.2093 0.0005 5 6 3.5664 1.2748 0.0006 6 1 4.0234 0.6363 0.7566 7 6 4.1917 1.1231 -1.3961 8 6 5.1815 2.2264 -0.9866 9 1 6.0817 1.8492 -0.5013 10 7 5.4710 3.1825 -2.0581 11 6 6.6693 3.1610 -2.6749 12 8 7.5105 2.3480 -2.3414 13 6 6.9597 4.1203 -3.7509 14 6 8.1253 4.1964 -4.4448 15 6 7.9988 5.2462 -5.3866 16 6 8.8590 5.7782 -6.3554 17 6 8.4435 6.8191 -7.1342 18 6 7.1733 7.3583 -6.9753 19 6 6.7365 8.5079 -7.8463 20 8 5.5823 8.1253 -8.5967 21 14 8.1154 8.9609 -9.0143 22 6 6.3112 6.8562 -6.0260 23 6 6.7098 5.7911 -5.2235 24 7 6.0908 5.0877 -4.2175 25 6 4.1079 2.7141 0.0006 26 1 -0.3633 0.5138 0.8900 27 1 -0.3632 0.5139 -0.8900 28 1 -0.3633 -1.0276 -0.0005 29 1 3.5244 1.4144 -2.2072 30 1 4.6621 0.1537 -1.5611 31 1 4.8004 3.8309 -2.3239 32 1 8.9928 3.5688 -4.3035 33 1 9.8489 5.3663 -6.4853 34 1 9.1087 7.2279 -7.8803 35 1 6.4945 9.3666 -7.2200 36 1 5.7249 7.3654 -9.1776 37 1 8.4769 7.7891 -9.8520 38 1 7.6974 10.0939 -9.8784 39 1 5.3272 7.2852 -5.9071 40 1 5.1916 5.2448 -3.8891 41 1 4.5107 3.0291 0.9632 42 1 3.4176 3.4402 -0.4288 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10970304_13158378.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:35:01 Heat of formation + Delta-G solvation = -59.179788 kcal Electronic energy + Delta-G solvation = -26921.407452 eV Core-core repulsion = 22834.717696 eV Total energy + Delta-G solvation = -4086.689756 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 331.130 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -42.73506 -41.99827 -40.75477 -39.40295 -38.83789 -37.39205 -36.99110 -34.79818 -33.28604 -31.20297 -30.42729 -29.49485 -27.61332 -27.04446 -26.42000 -24.49481 -23.28326 -22.40128 -21.96245 -21.44481 -20.78449 -19.48580 -19.03100 -18.51526 -18.07783 -17.76644 -17.47163 -16.91761 -16.64559 -16.49865 -16.33720 -16.12606 -15.64509 -15.54272 -15.17593 -14.90244 -14.75011 -14.50650 -14.49025 -14.32555 -13.99597 -13.82087 -13.64731 -13.17845 -13.11454 -12.70810 -12.59751 -12.55465 -12.47201 -12.06434 -11.98834 -11.85689 -11.58262 -11.46612 -11.27343 -10.96771 -10.62014 -10.34821 -9.34933 -8.84619 -4.94080 -0.36829 0.50391 0.95958 1.07137 1.28022 1.52223 1.62011 1.75186 1.95146 1.98848 2.19908 2.75310 3.04910 3.12788 3.33549 3.43681 3.53109 3.57188 3.59933 3.68832 3.88411 3.99346 4.10048 4.17410 4.22114 4.25617 4.29400 4.35322 4.41724 4.43653 4.47592 4.53224 4.59129 4.62225 4.69611 4.85413 4.87324 4.95072 5.17641 5.30664 5.33983 5.38408 5.50575 5.58938 5.94307 6.14130 6.29483 6.38263 6.64640 6.91835 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.356 6.356 3 C 0.472 3.528 4 O -0.505 6.505 5 C -0.109 4.109 6 H 0.134 0.866 7 C -0.134 4.134 8 C 0.126 3.874 9 H 0.129 0.871 10 N -0.719 5.719 11 C 0.588 3.412 12 O -0.515 6.515 13 C 0.011 3.989 14 C -0.098 4.098 15 C -0.117 4.117 16 C -0.050 4.050 17 C -0.146 4.146 18 C -0.086 4.086 19 C -0.075 4.075 20 O -0.531 6.531 21 Si 0.689 3.311 22 C -0.104 4.104 23 C 0.116 3.884 24 N -0.579 5.579 25 C -0.127 4.127 26 H 0.065 0.935 27 H 0.063 0.937 28 H 0.104 0.896 29 H 0.091 0.909 30 H 0.093 0.907 31 H 0.398 0.602 32 H 0.159 0.841 33 H 0.132 0.868 34 H 0.130 0.870 35 H 0.119 0.881 36 H 0.377 0.623 37 H -0.259 1.259 38 H -0.258 1.258 39 H 0.127 0.873 40 H 0.417 0.583 41 H 0.091 0.909 42 H 0.102 0.898 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.012 -0.131 1.043 1.052 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.272 6.272 3 C 0.315 3.685 4 O -0.393 6.393 5 C -0.128 4.128 6 H 0.152 0.848 7 C -0.173 4.173 8 C 0.022 3.978 9 H 0.147 0.853 10 N -0.369 5.369 11 C 0.375 3.625 12 O -0.390 6.390 13 C -0.098 4.098 14 C -0.125 4.125 15 C -0.121 4.121 16 C -0.069 4.069 17 C -0.164 4.164 18 C -0.088 4.088 19 C -0.185 4.185 20 O -0.337 6.337 21 Si 0.591 3.409 22 C -0.125 4.125 23 C 0.006 3.994 24 N -0.184 5.184 25 C -0.165 4.165 26 H 0.083 0.917 27 H 0.082 0.918 28 H 0.122 0.878 29 H 0.109 0.891 30 H 0.111 0.889 31 H 0.233 0.767 32 H 0.177 0.823 33 H 0.150 0.850 34 H 0.147 0.853 35 H 0.137 0.863 36 H 0.224 0.776 37 H -0.184 1.184 38 H -0.184 1.184 39 H 0.145 0.855 40 H 0.255 0.745 41 H 0.110 0.890 42 H 0.121 0.879 Dipole moment (debyes) X Y Z Total from point charges 0.228 0.101 0.888 0.922 hybrid contribution -2.034 -0.440 -0.256 2.097 sum -1.807 -0.339 0.632 1.944 Atomic orbital electron populations 1.23337 0.75830 1.04109 1.02712 1.86521 1.23797 1.33202 1.83706 1.23454 0.91553 0.81461 0.72059 1.90683 1.66998 1.36444 1.45157 1.22306 0.87795 1.00920 1.01803 0.84846 1.23461 0.97884 1.01291 0.94659 1.22514 0.98139 0.89396 0.87798 0.85288 1.45835 1.15998 1.37220 1.37888 1.17223 0.82037 0.82689 0.80586 1.90882 1.46301 1.37824 1.63943 1.20068 0.92663 0.95717 1.01326 1.20986 0.97323 0.98685 0.95474 1.18230 0.94379 0.99285 1.00246 1.20381 0.98829 0.94798 0.92887 1.20487 0.95800 0.98394 1.01730 1.19983 0.94156 0.97740 0.96898 1.25055 0.97067 0.97610 0.98762 1.86595 1.34334 1.53302 1.59478 0.94838 0.83212 0.81384 0.81498 1.19867 1.00578 0.95976 0.96077 1.18308 0.93115 0.95836 0.92141 1.41898 1.15469 1.29283 1.31712 1.23391 0.97023 0.95040 1.01057 0.91668 0.91786 0.87753 0.89050 0.88880 0.76728 0.82328 0.84971 0.85277 0.86330 0.77569 1.18403 1.18364 0.85527 0.74474 0.89026 0.87945 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 101.05 1.07 1.03 16 2 O -0.36 -0.32 10.57 -39.25 -0.41 -0.73 16 3 C 0.47 0.46 7.48 36.01 0.27 0.73 16 4 O -0.51 -1.84 15.65 -18.74 -0.29 -2.13 16 5 C -0.11 0.22 4.26 -90.96 -0.39 -0.17 16 6 H 0.13 -0.49 8.14 -51.93 -0.42 -0.92 16 7 C -0.13 0.29 7.43 -25.92 -0.19 0.10 16 8 C 0.13 -0.25 4.24 -67.12 -0.28 -0.53 16 9 H 0.13 -0.16 7.46 -51.93 -0.39 -0.55 16 10 N -0.72 1.22 5.35 -54.21 -0.29 0.93 16 11 C 0.59 0.75 7.80 -12.68 -0.10 0.65 16 12 O -0.51 -2.40 16.44 5.24 0.09 -2.31 16 13 C 0.01 0.01 6.97 -82.29 -0.57 -0.56 16 14 C -0.10 -0.15 10.53 -39.15 -0.41 -0.56 16 15 C -0.12 -0.16 6.16 -106.93 -0.66 -0.81 16 16 C -0.05 0.00 10.06 -39.53 -0.40 -0.40 16 17 C -0.15 0.08 8.59 -39.97 -0.34 -0.26 16 18 C -0.09 0.01 5.39 -104.57 -0.56 -0.55 16 19 C -0.08 0.05 2.81 36.01 0.10 0.15 16 20 O -0.53 -0.42 12.76 -35.23 -0.45 -0.87 16 21 Si 0.69 -0.87 29.75 -169.99 -5.06 -5.93 16 22 C -0.10 -0.03 9.62 -39.42 -0.38 -0.41 16 23 C 0.12 0.09 7.25 -83.98 -0.61 -0.52 16 24 N -0.58 0.51 6.07 -7.36 -0.04 0.47 16 25 C -0.13 0.32 7.16 -25.92 -0.19 0.13 16 26 H 0.06 -0.06 8.13 -51.93 -0.42 -0.48 16 27 H 0.06 -0.06 8.13 -51.93 -0.42 -0.48 16 28 H 0.10 -0.34 8.14 -51.93 -0.42 -0.76 16 29 H 0.09 -0.17 8.09 -51.93 -0.42 -0.59 16 30 H 0.09 -0.21 8.14 -51.93 -0.42 -0.63 16 31 H 0.40 -1.58 7.78 -40.82 -0.32 -1.89 16 32 H 0.16 0.13 8.06 -52.48 -0.42 -0.29 16 33 H 0.13 -0.26 8.06 -52.48 -0.42 -0.68 16 34 H 0.13 -0.31 4.82 -52.49 -0.25 -0.56 16 35 H 0.12 -0.17 7.96 -51.93 -0.41 -0.58 16 36 H 0.38 -0.70 8.70 45.56 0.40 -0.31 16 37 H -0.26 -0.19 7.11 56.52 0.40 0.22 16 38 H -0.26 -0.55 7.11 56.52 0.40 -0.15 16 39 H 0.13 -0.07 8.06 -52.49 -0.42 -0.50 16 40 H 0.42 -1.58 8.12 -40.82 -0.33 -1.91 16 41 H 0.09 -0.29 8.14 -51.93 -0.42 -0.71 16 42 H 0.10 -0.19 7.41 -51.93 -0.38 -0.58 16 LS Contribution 360.46 15.07 5.43 5.43 Total: 0.00 -9.71 360.46 -9.79 -19.50 By element: Atomic # 1 Polarization: -7.25 SS G_CDS: -5.11 Total: -12.36 kcal Atomic # 6 Polarization: 1.66 SS G_CDS: -3.65 Total: -1.99 kcal Atomic # 7 Polarization: 1.73 SS G_CDS: -0.33 Total: 1.40 kcal Atomic # 8 Polarization: -4.97 SS G_CDS: -1.07 Total: -6.04 kcal Atomic # 14 Polarization: -0.87 SS G_CDS: -5.06 Total: -5.93 kcal Total LS contribution 5.43 Total: 5.43 kcal Total: -9.71 -9.79 -19.50 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10970304_13158378.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -39.677 kcal (2) G-P(sol) polarization free energy of solvation -9.708 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -49.385 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.795 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.502 kcal (6) G-S(sol) free energy of system = (1) + (5) -59.180 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.83 seconds