Wall clock time and date at job start Sat Mar 6 2021 15:35:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45209 * 1 3 3 C 1.34224 * 116.99817 * 2 1 4 4 O 1.20826 * 120.00056 * 359.97438 * 3 2 1 5 5 C 1.50701 * 120.00127 * 180.02562 * 3 2 1 6 6 H 1.08993 * 112.90642 * 48.74341 * 5 3 2 7 7 C 1.53782 * 113.61554 * 179.97438 * 5 3 2 8 8 C 1.53781 * 87.07770 * 139.97903 * 7 5 3 9 9 H 1.09004 * 113.61537 * 89.20493 * 8 7 5 10 10 N 1.46501 * 113.61167 * 220.01850 * 8 7 5 11 11 C 1.34785 * 119.99725 * 203.47429 * 10 8 7 12 12 O 1.21576 * 119.99918 * 359.97438 * 11 10 8 13 13 C 1.47570 * 119.99725 * 180.02562 * 11 10 8 14 14 C 1.40208 * 120.11832 * 180.02562 * 13 11 10 15 15 O 1.35649 * 120.00369 * 359.97438 * 14 13 11 16 16 C 1.38821 * 119.99149 * 180.02562 * 14 13 11 17 17 C 1.37764 * 120.24704 * 359.97438 * 16 14 13 18 18 C 1.39846 * 120.24683 * 359.97438 * 17 16 14 19 19 C 1.47814 * 120.00427 * 179.97438 * 18 17 16 20 20 C 1.35938 * 125.92890 * 0.02562 * 19 18 17 21 21 C 1.40970 * 106.74380 * 179.97438 * 20 19 18 22 22 C 1.34703 * 107.02536 * 359.97438 * 21 20 19 23 23 C 1.50704 * 125.66339 * 180.26371 * 22 21 20 24 24 O 1.42899 * 109.47097 * 64.71713 * 23 22 21 25 25 Si 1.86300 * 109.47328 * 184.71706 * 23 22 21 26 26 O 1.34344 * 108.67382 * 0.02562 * 22 21 20 27 27 C 1.39174 * 119.99611 * 0.25856 * 18 17 16 28 28 C 1.53774 * 87.17424 * 334.60824 * 8 7 5 29 29 H 1.08998 * 109.46925 * 299.99522 * 1 2 3 30 30 H 1.08995 * 109.47252 * 60.00413 * 1 2 3 31 31 H 1.08998 * 109.46734 * 180.02562 * 1 2 3 32 32 H 1.09003 * 113.61168 * 25.43442 * 7 5 3 33 33 H 1.08997 * 113.61220 * 254.52697 * 7 5 3 34 34 H 0.96999 * 120.00267 * 23.47466 * 10 8 7 35 35 H 0.96697 * 114.00476 * 270.02565 * 15 14 13 36 36 H 1.08003 * 119.87238 * 179.97438 * 16 14 13 37 37 H 1.08001 * 119.88095 * 180.02562 * 17 16 14 38 38 H 1.08005 * 126.62937 * 359.95946 * 20 19 18 39 39 H 1.07999 * 126.48797 * 180.02562 * 21 20 19 40 40 H 1.09004 * 109.47061 * 304.72159 * 23 22 21 41 41 H 0.96701 * 114.00420 * 180.02562 * 24 23 22 42 42 H 1.48494 * 109.99963 * 178.68191 * 25 23 22 43 43 H 1.48494 * 109.99994 * 300.00033 * 25 23 22 44 44 H 1.08007 * 120.12302 * 179.72189 * 27 18 17 45 45 H 1.09009 * 113.61639 * 139.93883 * 28 8 7 46 46 H 1.09000 * 113.62126 * 270.83929 * 28 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4521 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 -0.0005 5 6 3.5664 1.2749 -0.0006 6 1 4.0244 0.6361 -0.7557 7 6 4.1077 2.7143 -0.0011 8 6 5.1813 2.2271 0.9862 9 1 6.0816 1.8497 0.5012 10 7 5.4707 3.1836 2.0575 11 6 6.6575 3.1425 2.6951 12 8 7.4875 2.3114 2.3816 13 6 6.9488 4.1056 3.7746 14 6 8.1826 4.0655 4.4393 15 8 9.1110 3.1399 4.0908 16 6 8.4536 4.9725 5.4547 17 6 7.5142 5.9143 5.8130 18 6 6.2806 5.9641 5.1561 19 6 5.2764 6.9765 5.5452 20 6 5.4240 7.9131 6.5193 21 6 4.2294 8.6611 6.5478 22 6 3.4210 8.1496 5.5995 23 6 2.0358 8.6413 5.2670 24 8 2.1135 9.9722 4.7525 25 14 1.2708 7.5244 3.9872 26 8 4.0567 7.1316 4.9957 27 6 5.9963 5.0567 4.1399 28 6 4.1937 1.1224 1.3970 29 1 -0.3633 0.5138 0.8900 30 1 -0.3633 0.5137 -0.8900 31 1 -0.3633 -1.0277 0.0005 32 1 3.4174 3.4406 0.4279 33 1 4.5105 3.0289 -0.9639 34 1 4.8083 3.8465 2.3078 35 1 9.0425 2.3098 4.5821 36 1 9.4046 4.9396 5.9657 37 1 7.7314 6.6173 6.6035 38 1 6.2891 8.0564 7.1497 39 1 4.0051 9.4883 7.2050 40 1 1.4222 8.6354 6.1679 41 1 1.2567 10.3536 4.5170 42 1 -0.1074 7.9800 3.6740 43 1 2.0980 7.5238 2.7540 44 1 5.0425 5.0904 3.6342 45 1 4.6656 0.1536 1.5614 46 1 3.5268 1.4126 2.2090 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10970304_13259648.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:35:09 Heat of formation + Delta-G solvation = -109.098947 kcal Electronic energy + Delta-G solvation = -33416.434646 eV Core-core repulsion = 28627.415619 eV Total energy + Delta-G solvation = -4789.019027 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.134 amu Computer time = 1.25 seconds Orbital eigenvalues (eV) -43.68237 -42.01077 -41.39343 -40.11926 -38.81430 -38.16614 -37.81315 -37.29868 -34.71606 -34.14122 -32.82291 -32.32063 -30.15028 -29.37845 -27.07771 -26.93799 -26.37846 -25.19391 -23.60667 -23.04740 -22.33515 -21.61467 -21.26969 -20.72613 -19.56484 -18.95359 -18.89047 -18.84519 -17.97667 -17.77057 -17.40052 -17.08364 -16.94826 -16.64958 -16.49526 -16.15471 -16.08193 -15.86018 -15.74526 -15.32156 -14.78148 -14.52332 -14.42452 -14.30676 -14.18002 -14.05512 -13.96365 -13.72772 -13.64351 -13.41654 -13.20623 -13.11085 -13.03983 -12.80157 -12.58414 -12.36404 -12.07916 -11.87374 -11.81979 -11.79449 -11.36905 -11.04435 -10.77523 -10.74635 -10.43457 -10.31990 -10.07750 -8.89490 -5.04956 -0.56131 -0.22629 0.75786 1.08227 1.14235 1.36209 1.49056 1.62474 1.68675 1.90421 1.93001 2.11839 2.62086 3.07121 3.14434 3.16172 3.23433 3.39241 3.50589 3.57126 3.60987 3.67503 3.78794 3.94154 3.98737 4.00723 4.10691 4.14982 4.21945 4.22498 4.34731 4.41956 4.46910 4.53568 4.57977 4.59350 4.63127 4.72229 4.78168 4.79393 4.83533 5.00029 5.01631 5.10813 5.16111 5.36120 5.40744 5.43564 5.45608 6.02325 6.23907 6.40580 6.66606 6.72071 7.17539 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.356 6.356 3 C 0.472 3.528 4 O -0.505 6.505 5 C -0.109 4.109 6 H 0.132 0.868 7 C -0.128 4.128 8 C 0.127 3.873 9 H 0.126 0.874 10 N -0.719 5.719 11 C 0.563 3.437 12 O -0.515 6.515 13 C -0.165 4.165 14 C 0.180 3.820 15 O -0.475 6.475 16 C -0.149 4.149 17 C -0.052 4.052 18 C -0.032 4.032 19 C 0.035 3.965 20 C -0.187 4.187 21 C -0.168 4.168 22 C -0.002 4.002 23 C -0.037 4.037 24 O -0.533 6.533 25 Si 0.692 3.308 26 O -0.165 6.165 27 C -0.054 4.054 28 C -0.133 4.133 29 H 0.064 0.936 30 H 0.064 0.936 31 H 0.103 0.897 32 H 0.103 0.897 33 H 0.089 0.911 34 H 0.401 0.599 35 H 0.399 0.601 36 H 0.146 0.854 37 H 0.140 0.860 38 H 0.155 0.845 39 H 0.154 0.846 40 H 0.097 0.903 41 H 0.388 0.612 42 H -0.252 1.252 43 H -0.249 1.249 44 H 0.136 0.864 45 H 0.091 0.909 46 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.342 -1.592 3.987 5.441 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.273 6.273 3 C 0.315 3.685 4 O -0.392 6.392 5 C -0.129 4.129 6 H 0.150 0.850 7 C -0.166 4.166 8 C 0.022 3.978 9 H 0.143 0.857 10 N -0.371 5.371 11 C 0.351 3.649 12 O -0.391 6.391 13 C -0.169 4.169 14 C 0.133 3.867 15 O -0.287 6.287 16 C -0.167 4.167 17 C -0.070 4.070 18 C -0.032 4.032 19 C -0.015 4.015 20 C -0.206 4.206 21 C -0.187 4.187 22 C -0.052 4.052 23 C -0.146 4.146 24 O -0.342 6.342 25 Si 0.591 3.409 26 O -0.063 6.063 27 C -0.073 4.073 28 C -0.172 4.172 29 H 0.083 0.917 30 H 0.083 0.917 31 H 0.122 0.878 32 H 0.121 0.879 33 H 0.108 0.892 34 H 0.238 0.762 35 H 0.258 0.742 36 H 0.164 0.836 37 H 0.158 0.842 38 H 0.173 0.827 39 H 0.172 0.828 40 H 0.115 0.885 41 H 0.237 0.763 42 H -0.176 1.176 43 H -0.173 1.173 44 H 0.153 0.847 45 H 0.109 0.891 46 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges -2.612 -1.824 2.417 3.998 hybrid contribution -1.103 1.410 0.484 1.855 sum -3.715 -0.413 2.901 4.731 Atomic orbital electron populations 1.23325 0.75932 1.04024 1.02698 1.86523 1.23717 1.33257 1.83760 1.23466 0.91560 0.81433 0.72054 1.90683 1.66973 1.36434 1.45116 1.22336 0.87711 1.00937 1.01874 0.85004 1.23390 0.97168 0.94989 1.01055 1.22442 0.97872 0.89483 0.87971 0.85661 1.45886 1.17517 1.36303 1.37386 1.18010 0.81681 0.83656 0.81596 1.90832 1.46023 1.37312 1.64895 1.20264 0.95345 1.00150 1.01126 1.18590 0.86096 0.91007 0.90990 1.84750 1.51322 1.27167 1.65458 1.21395 1.00853 0.96755 0.97690 1.21128 0.90884 0.97037 0.97991 1.17567 0.92370 0.94993 0.98311 1.20235 0.84263 0.99483 0.97496 1.21845 1.00333 0.97357 1.01027 1.21524 0.93612 1.02209 1.01373 1.21260 0.95747 0.91634 0.96564 1.23788 0.93492 0.90319 1.06963 1.86570 1.35557 1.26693 1.85347 0.94607 0.78945 0.87659 0.79692 1.83899 1.25070 1.44787 1.52495 1.21309 0.98406 0.92499 0.95044 1.23490 0.97940 1.01202 0.94573 0.91743 0.91742 0.87846 0.87879 0.89192 0.76247 0.74155 0.83626 0.84178 0.82707 0.82841 0.88490 0.76271 1.17597 1.17312 0.84675 0.89057 0.88952 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 101.05 1.07 1.04 16 2 O -0.36 -0.39 10.57 -39.24 -0.41 -0.80 16 3 C 0.47 0.64 7.49 36.01 0.27 0.91 16 4 O -0.50 -2.01 15.65 -18.75 -0.29 -2.30 16 5 C -0.11 0.15 4.26 -90.87 -0.39 -0.24 16 6 H 0.13 -0.40 8.14 -51.93 -0.42 -0.82 16 7 C -0.13 0.18 7.15 -25.92 -0.19 0.00 16 8 C 0.13 -0.12 4.21 -67.12 -0.28 -0.40 16 9 H 0.13 -0.01 7.50 -51.93 -0.39 -0.40 16 10 N -0.72 0.23 5.31 -54.05 -0.29 -0.06 16 11 C 0.56 1.27 7.76 -12.45 -0.10 1.17 16 12 O -0.51 -2.73 14.76 -16.66 -0.25 -2.97 16 13 C -0.17 -0.21 5.88 -104.89 -0.62 -0.82 16 14 C 0.18 0.21 6.72 -38.63 -0.26 -0.05 16 15 O -0.48 -0.86 11.55 -40.60 -0.47 -1.33 16 16 C -0.15 0.11 9.96 -39.54 -0.39 -0.29 16 17 C -0.05 0.05 9.54 -39.15 -0.37 -0.32 16 18 C -0.03 -0.01 5.87 -105.03 -0.62 -0.63 16 19 C 0.04 0.04 7.03 -36.49 -0.26 -0.21 16 20 C -0.19 -0.12 10.26 -39.37 -0.40 -0.52 16 21 C -0.17 -0.21 10.78 -39.80 -0.43 -0.64 16 22 C 0.00 0.00 6.24 -35.56 -0.22 -0.23 16 23 C -0.04 0.02 2.97 36.01 0.11 0.13 16 24 O -0.53 -0.27 12.86 -35.23 -0.45 -0.72 16 25 Si 0.69 -0.56 32.11 -169.99 -5.46 -6.02 16 26 O -0.16 -0.31 8.80 4.58 0.04 -0.27 16 27 C -0.05 -0.01 9.20 -38.78 -0.36 -0.36 16 28 C -0.13 0.21 7.44 -25.83 -0.19 0.02 16 29 H 0.06 -0.06 8.13 -51.93 -0.42 -0.48 16 30 H 0.06 -0.05 8.13 -51.93 -0.42 -0.47 16 31 H 0.10 -0.32 8.14 -51.93 -0.42 -0.75 16 32 H 0.10 -0.07 7.40 -51.93 -0.38 -0.46 16 33 H 0.09 -0.18 8.14 -51.93 -0.42 -0.60 16 34 H 0.40 -0.84 6.74 -40.82 -0.27 -1.11 16 35 H 0.40 -0.82 9.06 45.56 0.41 -0.40 16 36 H 0.15 -0.37 8.06 -52.48 -0.42 -0.80 16 37 H 0.14 -0.46 6.96 -52.49 -0.37 -0.82 16 38 H 0.16 -0.28 7.25 -52.48 -0.38 -0.66 16 39 H 0.15 -0.02 8.06 -52.49 -0.42 -0.45 16 40 H 0.10 -0.29 7.96 -51.93 -0.41 -0.71 16 41 H 0.39 -1.51 8.74 45.56 0.40 -1.12 16 42 H -0.25 -0.12 7.11 56.52 0.40 0.28 16 43 H -0.25 -0.72 7.11 56.52 0.40 -0.32 16 44 H 0.14 -0.20 6.24 -52.48 -0.33 -0.53 16 45 H 0.09 -0.17 8.14 -51.92 -0.42 -0.59 16 46 H 0.09 -0.13 8.10 -51.93 -0.42 -0.55 16 LS Contribution 400.03 15.07 6.03 6.03 Total: 0.00 -11.75 400.03 -9.90 -21.65 By element: Atomic # 1 Polarization: -7.04 SS G_CDS: -4.72 Total: -11.76 kcal Atomic # 6 Polarization: 2.18 SS G_CDS: -3.63 Total: -1.45 kcal Atomic # 7 Polarization: 0.23 SS G_CDS: -0.29 Total: -0.06 kcal Atomic # 8 Polarization: -6.56 SS G_CDS: -1.84 Total: -8.40 kcal Atomic # 14 Polarization: -0.56 SS G_CDS: -5.46 Total: -6.02 kcal Total LS contribution 6.03 Total: 6.03 kcal Total: -11.75 -9.90 -21.65 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10970304_13259648.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -87.446 kcal (2) G-P(sol) polarization free energy of solvation -11.748 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -99.195 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.904 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.653 kcal (6) G-S(sol) free energy of system = (1) + (5) -109.099 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.25 seconds