Wall clock time and date at job start Sat Mar 6 2021 15:35:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45209 * 1 3 3 C 1.34224 * 116.99817 * 2 1 4 4 O 1.20826 * 120.00056 * 359.97438 * 3 2 1 5 5 C 1.50701 * 120.00127 * 180.02562 * 3 2 1 6 6 H 1.08993 * 112.90642 * 48.74341 * 5 3 2 7 7 C 1.53782 * 113.61554 * 179.97438 * 5 3 2 8 8 C 1.53781 * 87.07770 * 139.97903 * 7 5 3 9 9 H 1.09004 * 113.61537 * 89.20493 * 8 7 5 10 10 N 1.46501 * 113.61167 * 220.01850 * 8 7 5 11 11 C 1.34785 * 119.99725 * 203.47429 * 10 8 7 12 12 O 1.21576 * 119.99918 * 359.97438 * 11 10 8 13 13 C 1.47570 * 119.99725 * 180.02562 * 11 10 8 14 14 C 1.40208 * 120.11832 * 180.02562 * 13 11 10 15 15 O 1.35649 * 120.00369 * 359.97438 * 14 13 11 16 16 C 1.38821 * 119.99149 * 180.02562 * 14 13 11 17 17 C 1.37764 * 120.24704 * 359.97438 * 16 14 13 18 18 C 1.39846 * 120.24683 * 359.97438 * 17 16 14 19 19 C 1.47814 * 120.00427 * 179.97438 * 18 17 16 20 20 C 1.35938 * 125.92890 * 0.02562 * 19 18 17 21 21 C 1.40970 * 106.74380 * 179.97438 * 20 19 18 22 22 C 1.34703 * 107.02536 * 359.97438 * 21 20 19 23 23 C 1.50704 * 125.66339 * 180.26371 * 22 21 20 24 24 O 1.42899 * 109.47097 * 64.71713 * 23 22 21 25 25 Si 1.86300 * 109.47328 * 184.71706 * 23 22 21 26 26 O 1.34344 * 108.67382 * 0.02562 * 22 21 20 27 27 C 1.39174 * 119.99611 * 0.25856 * 18 17 16 28 28 C 1.53774 * 87.17424 * 334.60824 * 8 7 5 29 29 H 1.08998 * 109.46925 * 299.99522 * 1 2 3 30 30 H 1.08995 * 109.47252 * 60.00413 * 1 2 3 31 31 H 1.08998 * 109.46734 * 180.02562 * 1 2 3 32 32 H 1.09003 * 113.61168 * 25.43442 * 7 5 3 33 33 H 1.08997 * 113.61220 * 254.52697 * 7 5 3 34 34 H 0.96999 * 120.00267 * 23.47466 * 10 8 7 35 35 H 0.96697 * 114.00476 * 270.02565 * 15 14 13 36 36 H 1.08003 * 119.87238 * 179.97438 * 16 14 13 37 37 H 1.08001 * 119.88095 * 180.02562 * 17 16 14 38 38 H 1.08005 * 126.62937 * 359.95946 * 20 19 18 39 39 H 1.07999 * 126.48797 * 180.02562 * 21 20 19 40 40 H 1.09004 * 109.47061 * 304.72159 * 23 22 21 41 41 H 0.96701 * 114.00420 * 180.02562 * 24 23 22 42 42 H 1.48494 * 109.99963 * 178.68191 * 25 23 22 43 43 H 1.48494 * 109.99994 * 300.00033 * 25 23 22 44 44 H 1.08007 * 120.12302 * 179.72189 * 27 18 17 45 45 H 1.09009 * 113.61639 * 139.93883 * 28 8 7 46 46 H 1.09000 * 113.62126 * 270.83929 * 28 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4521 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 -0.0005 5 6 3.5664 1.2749 -0.0006 6 1 4.0244 0.6361 -0.7557 7 6 4.1077 2.7143 -0.0011 8 6 5.1813 2.2271 0.9862 9 1 6.0816 1.8497 0.5012 10 7 5.4707 3.1836 2.0575 11 6 6.6575 3.1425 2.6951 12 8 7.4875 2.3114 2.3816 13 6 6.9488 4.1056 3.7746 14 6 8.1826 4.0655 4.4393 15 8 9.1110 3.1399 4.0908 16 6 8.4536 4.9725 5.4547 17 6 7.5142 5.9143 5.8130 18 6 6.2806 5.9641 5.1561 19 6 5.2764 6.9765 5.5452 20 6 5.4240 7.9131 6.5193 21 6 4.2294 8.6611 6.5478 22 6 3.4210 8.1496 5.5995 23 6 2.0358 8.6413 5.2670 24 8 2.1135 9.9722 4.7525 25 14 1.2708 7.5244 3.9872 26 8 4.0567 7.1316 4.9957 27 6 5.9963 5.0567 4.1399 28 6 4.1937 1.1224 1.3970 29 1 -0.3633 0.5138 0.8900 30 1 -0.3633 0.5137 -0.8900 31 1 -0.3633 -1.0277 0.0005 32 1 3.4174 3.4406 0.4279 33 1 4.5105 3.0289 -0.9639 34 1 4.8083 3.8465 2.3078 35 1 9.0425 2.3098 4.5821 36 1 9.4046 4.9396 5.9657 37 1 7.7314 6.6173 6.6035 38 1 6.2891 8.0564 7.1497 39 1 4.0051 9.4883 7.2050 40 1 1.4222 8.6354 6.1679 41 1 1.2567 10.3536 4.5170 42 1 -0.1074 7.9800 3.6740 43 1 2.0980 7.5238 2.7540 44 1 5.0425 5.0904 3.6342 45 1 4.6656 0.1536 1.5614 46 1 3.5268 1.4126 2.2090 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10970304_13259648.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:35:07 Heat of formation + Delta-G solvation = -110.402161 kcal Electronic energy + Delta-G solvation = -33416.491158 eV Core-core repulsion = 28627.415619 eV Total energy + Delta-G solvation = -4789.075539 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.134 amu Computer time = 1.37 seconds Orbital eigenvalues (eV) -43.70125 -42.06210 -41.45678 -40.13700 -38.88413 -38.14447 -37.82564 -37.42577 -34.80505 -34.16400 -32.82642 -32.28986 -30.13536 -29.36193 -27.05842 -26.85779 -26.36091 -25.19467 -23.59161 -23.07467 -22.36311 -21.65173 -21.29017 -20.72544 -19.56680 -18.97724 -18.92738 -18.80923 -18.05829 -17.79548 -17.45708 -17.12123 -16.96145 -16.66983 -16.48022 -16.15148 -16.08318 -15.85355 -15.80164 -15.35393 -14.75868 -14.50337 -14.45348 -14.29986 -14.21524 -14.10004 -13.95546 -13.69647 -13.59645 -13.42514 -13.17210 -13.10066 -13.00740 -12.82872 -12.53276 -12.36831 -12.16034 -11.86749 -11.84962 -11.82553 -11.44098 -11.06467 -10.90351 -10.71347 -10.45105 -10.31903 -10.08759 -8.90219 -5.01070 -0.55798 -0.21515 0.74801 1.04892 1.12648 1.36864 1.48429 1.63339 1.69763 1.85455 1.90068 2.10350 2.62393 3.10616 3.20395 3.21506 3.28907 3.43360 3.56703 3.63293 3.67472 3.73887 3.82931 3.99983 4.02075 4.07788 4.18774 4.26146 4.28699 4.30783 4.41093 4.48689 4.54599 4.60646 4.64780 4.67718 4.68890 4.79533 4.81766 4.88392 4.89629 5.02301 5.04438 5.14704 5.21179 5.31986 5.43207 5.45265 5.51772 6.00430 6.37233 6.49053 6.64006 6.74985 7.08024 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.362 6.362 3 C 0.472 3.528 4 O -0.536 6.536 5 C -0.104 4.104 6 H 0.153 0.847 7 C -0.124 4.124 8 C 0.125 3.875 9 H 0.119 0.881 10 N -0.710 5.710 11 C 0.561 3.439 12 O -0.552 6.552 13 C -0.180 4.180 14 C 0.167 3.833 15 O -0.493 6.493 16 C -0.146 4.146 17 C -0.044 4.044 18 C -0.042 4.042 19 C 0.021 3.979 20 C -0.188 4.188 21 C -0.179 4.179 22 C -0.020 4.020 23 C -0.038 4.038 24 O -0.554 6.554 25 Si 0.755 3.245 26 O -0.178 6.178 27 C -0.054 4.054 28 C -0.126 4.126 29 H 0.062 0.938 30 H 0.060 0.940 31 H 0.127 0.873 32 H 0.095 0.905 33 H 0.098 0.902 34 H 0.409 0.591 35 H 0.411 0.589 36 H 0.166 0.834 37 H 0.166 0.834 38 H 0.179 0.821 39 H 0.165 0.835 40 H 0.128 0.872 41 H 0.405 0.595 42 H -0.266 1.266 43 H -0.306 1.306 44 H 0.143 0.857 45 H 0.097 0.903 46 H 0.091 0.909 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.454 -1.313 5.185 6.367 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.278 6.278 3 C 0.316 3.684 4 O -0.426 6.426 5 C -0.123 4.123 6 H 0.170 0.830 7 C -0.162 4.162 8 C 0.020 3.980 9 H 0.137 0.863 10 N -0.361 5.361 11 C 0.349 3.651 12 O -0.431 6.431 13 C -0.184 4.184 14 C 0.120 3.880 15 O -0.307 6.307 16 C -0.164 4.164 17 C -0.062 4.062 18 C -0.043 4.043 19 C -0.028 4.028 20 C -0.207 4.207 21 C -0.199 4.199 22 C -0.070 4.070 23 C -0.147 4.147 24 O -0.366 6.366 25 Si 0.659 3.341 26 O -0.076 6.076 27 C -0.072 4.072 28 C -0.165 4.165 29 H 0.081 0.919 30 H 0.079 0.921 31 H 0.146 0.854 32 H 0.113 0.887 33 H 0.116 0.884 34 H 0.247 0.753 35 H 0.272 0.728 36 H 0.184 0.816 37 H 0.184 0.816 38 H 0.196 0.804 39 H 0.183 0.817 40 H 0.145 0.855 41 H 0.257 0.743 42 H -0.191 1.191 43 H -0.234 1.234 44 H 0.161 0.839 45 H 0.115 0.885 46 H 0.109 0.891 Dipole moment (debyes) X Y Z Total from point charges -2.774 -1.549 3.636 4.828 hybrid contribution -1.100 1.341 0.070 1.736 sum -3.874 -0.208 3.705 5.364 Atomic orbital electron populations 1.23530 0.75012 1.05590 1.02490 1.86524 1.24778 1.33091 1.83450 1.23937 0.92416 0.81044 0.70980 1.90668 1.67845 1.37374 1.46729 1.22441 0.86087 1.01259 1.02541 0.82959 1.23350 0.96647 0.94953 1.01208 1.22458 0.97782 0.89741 0.87974 0.86346 1.45865 1.17009 1.36302 1.36969 1.18231 0.81763 0.83372 0.81726 1.90801 1.47223 1.38878 1.66209 1.20262 0.96046 1.00624 1.01445 1.18859 0.86030 0.91449 0.91660 1.84704 1.51624 1.28088 1.66290 1.21589 1.01687 0.96026 0.97068 1.21422 0.89951 0.96879 0.97906 1.17712 0.92900 0.94984 0.98659 1.20492 0.84290 1.00080 0.97962 1.22173 1.00906 0.96695 1.00886 1.21802 0.93885 1.02621 1.01543 1.21719 0.96652 0.91747 0.96848 1.23951 0.92848 0.89738 1.08154 1.86520 1.37411 1.27116 1.85571 0.93869 0.76329 0.86844 0.77048 1.83889 1.25547 1.45206 1.52934 1.21385 0.98523 0.92214 0.95126 1.23441 0.97460 1.01148 0.94436 0.91873 0.92084 0.85439 0.88651 0.88383 0.75307 0.72763 0.81648 0.81613 0.80410 0.81727 0.85451 0.74285 1.19138 1.23363 0.83895 0.88482 0.89072 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 10.56 113.37 1.20 1.15 16 2 O -0.36 -0.86 10.57 -51.36 -0.54 -1.40 16 3 C 0.47 1.56 7.49 71.24 0.53 2.09 16 4 O -0.54 -4.90 15.65 21.96 0.34 -4.55 16 5 C -0.10 0.26 4.26 -10.96 -0.05 0.21 16 6 H 0.15 -1.00 8.14 -2.39 -0.02 -1.02 16 7 C -0.12 0.27 7.15 31.12 0.22 0.49 16 8 C 0.13 -0.12 4.21 45.52 0.19 0.07 16 9 H 0.12 0.11 7.50 -2.38 -0.02 0.09 16 10 N -0.71 -0.45 5.31 -443.17 -2.35 -2.80 16 11 C 0.56 3.37 7.76 86.70 0.67 4.04 16 12 O -0.55 -6.83 14.76 17.04 0.25 -6.58 16 13 C -0.18 -0.65 5.88 -20.04 -0.12 -0.77 16 14 C 0.17 0.50 6.72 22.89 0.15 0.65 16 15 O -0.49 -2.31 11.55 -68.65 -0.79 -3.10 16 16 C -0.15 0.30 9.96 22.30 0.22 0.52 16 17 C -0.04 0.13 9.54 22.55 0.22 0.35 16 18 C -0.04 -0.03 5.87 -20.13 -0.12 -0.14 16 19 C 0.02 0.05 7.03 24.27 0.17 0.22 16 20 C -0.19 -0.07 10.26 22.41 0.23 0.16 16 21 C -0.18 -0.33 10.78 22.13 0.24 -0.09 16 22 C -0.02 -0.06 6.24 24.88 0.16 0.09 16 23 C -0.04 0.05 2.97 71.24 0.21 0.27 16 24 O -0.55 -0.40 12.86 -148.98 -1.92 -2.32 16 25 Si 0.76 -0.69 32.11 68.60 2.20 1.51 16 26 O -0.18 -0.78 8.80 -6.52 -0.06 -0.83 16 27 C -0.05 -0.06 9.20 22.79 0.21 0.15 16 28 C -0.13 0.34 7.44 31.18 0.23 0.57 16 29 H 0.06 -0.08 8.13 -2.39 -0.02 -0.10 16 30 H 0.06 -0.05 8.13 -2.39 -0.02 -0.07 16 31 H 0.13 -0.88 8.14 -2.39 -0.02 -0.90 16 32 H 0.10 -0.02 7.40 -2.39 -0.02 -0.04 16 33 H 0.10 -0.36 8.14 -2.39 -0.02 -0.38 16 34 H 0.41 -1.16 6.74 -92.71 -0.62 -1.79 16 35 H 0.41 -1.15 9.06 -74.06 -0.67 -1.82 16 36 H 0.17 -1.06 8.06 -2.91 -0.02 -1.09 16 37 H 0.17 -1.44 6.96 -2.91 -0.02 -1.47 16 38 H 0.18 -0.98 7.25 -2.91 -0.02 -1.00 16 39 H 0.17 -0.21 8.06 -2.91 -0.02 -0.23 16 40 H 0.13 -0.97 7.96 -2.38 -0.02 -0.99 16 41 H 0.40 -3.33 8.74 -74.06 -0.65 -3.98 16 42 H -0.27 -0.33 7.11 99.48 0.71 0.38 16 43 H -0.31 -2.60 7.11 99.48 0.71 -1.89 16 44 H 0.14 -0.24 6.24 -2.91 -0.02 -0.26 16 45 H 0.10 -0.34 8.14 -2.38 -0.02 -0.36 16 46 H 0.09 -0.21 8.10 -2.39 -0.02 -0.23 16 Total: 0.00 -28.07 400.03 0.88 -27.19 By element: Atomic # 1 Polarization: -16.32 SS G_CDS: -0.83 Total: -17.15 kcal Atomic # 6 Polarization: 5.46 SS G_CDS: 4.57 Total: 10.04 kcal Atomic # 7 Polarization: -0.45 SS G_CDS: -2.35 Total: -2.80 kcal Atomic # 8 Polarization: -16.08 SS G_CDS: -2.71 Total: -18.79 kcal Atomic # 14 Polarization: -0.69 SS G_CDS: 2.20 Total: 1.51 kcal Total: -28.07 0.88 -27.19 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10970304_13259648.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -83.213 kcal (2) G-P(sol) polarization free energy of solvation -28.073 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -111.286 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.884 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.189 kcal (6) G-S(sol) free energy of system = (1) + (5) -110.402 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.37 seconds