Wall clock time and date at job start Sat Mar 6 2021 15:35:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45198 * 1 3 3 C 1.34227 * 116.99800 * 2 1 4 4 O 1.20824 * 120.00392 * 359.97438 * 3 2 1 5 5 C 1.50704 * 119.99955 * 179.97438 * 3 2 1 6 6 H 1.09000 * 112.85094 * 311.19796 * 5 3 2 7 7 C 1.53958 * 113.66402 * 82.43923 * 5 3 2 8 8 C 1.53785 * 87.01607 * 139.93175 * 7 5 3 9 9 H 1.09005 * 113.61481 * 89.22981 * 8 7 5 10 10 N 1.46496 * 113.61647 * 220.04704 * 8 7 5 11 11 C 1.34776 * 120.00019 * 254.14124 * 10 8 7 12 12 O 1.21512 * 120.00320 * 359.97438 * 11 10 8 13 13 C 1.48176 * 119.99822 * 179.97438 * 11 10 8 14 14 N 1.32713 * 119.72649 * 359.97438 * 13 11 10 15 15 C 1.31518 * 121.64516 * 179.72544 * 14 13 11 16 16 C 1.38556 * 120.90281 * 0.58770 * 15 14 13 17 17 C 1.50696 * 120.32642 * 179.69729 * 16 15 14 18 18 O 1.42903 * 109.47131 * 119.72172 * 17 16 15 19 19 Si 1.86305 * 109.47185 * 359.72713 * 17 16 15 20 20 C 1.38624 * 119.35081 * 359.42748 * 16 15 14 21 21 C 1.38592 * 118.49041 * 0.27463 * 20 16 15 22 22 C 1.53774 * 87.17400 * 334.64018 * 8 7 5 23 23 H 1.09007 * 109.47009 * 180.02562 * 1 2 3 24 24 H 1.08995 * 109.47745 * 299.99882 * 1 2 3 25 25 H 1.09004 * 109.47026 * 60.00185 * 1 2 3 26 26 H 1.08997 * 113.61484 * 25.41545 * 7 5 3 27 27 H 1.08994 * 113.66666 * 254.45981 * 7 5 3 28 28 H 0.96997 * 119.99880 * 74.13525 * 10 8 7 29 29 H 1.08003 * 119.54985 * 180.31102 * 15 14 13 30 30 H 1.08999 * 109.47358 * 239.72532 * 17 16 15 31 31 H 0.96700 * 114.00311 * 300.00591 * 18 17 16 32 32 H 1.48499 * 109.99670 * 58.67633 * 19 17 16 33 33 H 1.48497 * 110.00233 * 179.97438 * 19 17 16 34 34 H 1.08006 * 120.75638 * 180.25509 * 20 16 15 35 35 H 1.07994 * 120.47349 * 180.02562 * 21 20 16 36 36 H 1.09006 * 113.61513 * 139.93828 * 22 8 7 37 37 H 1.09005 * 113.61706 * 270.75242 * 22 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1960 0.0000 4 8 1.4033 2.2093 -0.0005 5 6 3.5663 1.2749 0.0006 6 1 4.0233 0.6365 0.7567 7 6 4.1937 1.1217 -1.3970 8 6 5.1813 2.2267 -0.9866 9 1 6.0816 1.8495 -0.5013 10 7 5.4708 3.1827 -2.0582 11 6 6.6575 3.1413 -2.6958 12 8 7.4875 2.3114 -2.3816 13 6 6.9500 4.1080 -3.7801 14 7 6.0394 5.0119 -4.1192 15 6 6.2611 5.8909 -5.0720 16 6 7.4582 5.8974 -5.7697 17 6 7.6959 6.9062 -6.8636 18 8 8.8304 7.7096 -6.5324 19 14 6.1946 7.9949 -7.0413 20 6 8.4373 4.9704 -5.4477 21 6 8.1785 4.0600 -4.4353 22 6 4.1077 2.7142 0.0005 23 1 -0.3633 -1.0277 0.0005 24 1 -0.3634 0.5138 0.8899 25 1 -0.3633 0.5138 -0.8900 26 1 3.5269 1.4116 -2.2091 27 1 4.6657 0.1530 -1.5609 28 1 4.8084 3.8455 -2.3089 29 1 5.4980 6.6148 -5.3170 30 1 7.8810 6.3862 -7.8035 31 1 8.7357 8.2022 -5.7057 32 1 5.9130 8.6852 -5.7570 33 1 6.4166 8.9946 -8.1167 34 1 9.3804 4.9577 -5.9740 35 1 8.9187 3.3242 -4.1580 36 1 4.5104 3.0293 0.9632 37 1 3.4182 3.4415 -0.4283 There are 53 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 53 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10970304_13287726.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:35:15 Heat of formation + Delta-G solvation = -81.184257 kcal Electronic energy + Delta-G solvation = -22557.120188 eV Core-core repulsion = 18881.466146 eV Total energy + Delta-G solvation = -3675.654042 eV No. of doubly occupied orbitals = 53 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 293.114 amu Computer time = 0.55 seconds Orbital eigenvalues (eV) -42.07681 -41.69923 -40.47516 -39.08803 -38.07563 -37.30077 -34.78639 -33.63216 -32.99928 -29.47739 -28.14549 -26.93205 -26.66177 -25.07760 -24.04241 -22.54613 -21.71055 -20.84721 -19.16170 -18.94629 -18.72844 -18.00151 -17.61190 -17.36580 -16.83701 -16.57711 -16.45982 -16.21508 -16.10644 -15.92420 -15.15927 -14.69017 -14.47671 -14.41967 -14.28647 -14.16221 -13.69496 -13.54825 -13.50011 -13.03747 -12.74082 -12.60475 -12.37127 -12.15870 -11.87215 -11.77981 -11.38235 -11.29929 -11.14873 -10.80883 -10.66407 -10.37558 -10.09561 -5.11954 -0.60945 0.02541 1.06789 1.15742 1.44025 1.58339 1.62937 1.82485 2.05768 2.65165 2.90843 3.13698 3.17090 3.24361 3.38963 3.56395 3.61100 3.67294 3.71368 3.88919 3.97061 4.09723 4.16572 4.24056 4.31946 4.37831 4.47899 4.50580 4.55375 4.59638 4.72342 4.79827 4.80848 4.91898 5.02356 5.31689 5.37480 5.42847 6.18042 6.28941 6.59121 6.73662 7.08746 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.357 6.357 3 C 0.472 3.528 4 O -0.504 6.504 5 C -0.109 4.109 6 H 0.132 0.868 7 C -0.133 4.133 8 C 0.123 3.877 9 H 0.125 0.875 10 N -0.700 5.700 11 C 0.575 3.425 12 O -0.527 6.527 13 C 0.080 3.920 14 N -0.453 5.453 15 C 0.104 3.896 16 C -0.148 4.148 17 C -0.074 4.074 18 O -0.526 6.526 19 Si 0.685 3.315 20 C -0.053 4.053 21 C -0.107 4.107 22 C -0.126 4.126 23 H 0.103 0.897 24 H 0.064 0.936 25 H 0.064 0.936 26 H 0.093 0.907 27 H 0.091 0.909 28 H 0.414 0.586 29 H 0.165 0.835 30 H 0.126 0.874 31 H 0.378 0.622 32 H -0.255 1.255 33 H -0.251 1.251 34 H 0.148 0.852 35 H 0.153 0.847 36 H 0.090 0.910 37 H 0.105 0.895 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.942 -0.612 -1.281 2.406 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.273 6.273 3 C 0.315 3.685 4 O -0.391 6.391 5 C -0.128 4.128 6 H 0.150 0.850 7 C -0.172 4.172 8 C 0.018 3.982 9 H 0.143 0.857 10 N -0.351 5.351 11 C 0.360 3.640 12 O -0.403 6.403 13 C -0.058 4.058 14 N -0.164 5.164 15 C -0.056 4.056 16 C -0.151 4.151 17 C -0.184 4.184 18 O -0.332 6.332 19 Si 0.585 3.415 20 C -0.079 4.079 21 C -0.128 4.128 22 C -0.164 4.164 23 H 0.122 0.878 24 H 0.083 0.917 25 H 0.082 0.918 26 H 0.111 0.889 27 H 0.110 0.890 28 H 0.251 0.749 29 H 0.181 0.819 30 H 0.143 0.857 31 H 0.226 0.774 32 H -0.179 1.179 33 H -0.176 1.176 34 H 0.166 0.834 35 H 0.171 0.829 36 H 0.108 0.892 37 H 0.123 0.877 Dipole moment (debyes) X Y Z Total from point charges -2.471 -0.377 -1.087 2.726 hybrid contribution 1.003 0.712 0.207 1.247 sum -1.468 0.335 -0.881 1.744 Atomic orbital electron populations 1.23326 0.75929 1.04020 1.02709 1.86519 1.23724 1.33267 1.83776 1.23462 0.91561 0.81435 0.72080 1.90686 1.66973 1.36425 1.45065 1.22339 0.87736 1.00959 1.01808 0.84986 1.23486 0.97928 1.01104 0.94668 1.22515 0.97972 0.89631 0.88076 0.85673 1.45777 1.17355 1.35802 1.36153 1.17888 0.82106 0.82904 0.81090 1.90818 1.46899 1.37360 1.65174 1.21161 0.91926 0.95517 0.97240 1.67521 1.32040 1.02776 1.14029 1.22625 0.95400 0.96230 0.91327 1.21598 0.95782 0.98594 0.99077 1.25016 0.99415 0.95693 0.98265 1.86636 1.38475 1.62246 1.45859 0.95029 0.81752 0.82760 0.81990 1.21565 0.99327 0.91936 0.95073 1.22231 0.97175 0.98867 0.94538 1.23372 0.97098 0.95004 1.00909 0.87842 0.91729 0.91751 0.88884 0.89029 0.74874 0.81879 0.85651 0.77406 1.17920 1.17565 0.83416 0.82931 0.89173 0.87712 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.56 101.05 1.07 1.04 16 2 O -0.36 -0.46 10.57 -39.25 -0.41 -0.87 16 3 C 0.47 0.72 7.49 36.01 0.27 0.99 16 4 O -0.50 -2.14 15.65 -18.75 -0.29 -2.44 16 5 C -0.11 0.14 4.26 -90.87 -0.39 -0.25 16 6 H 0.13 -0.41 8.14 -51.93 -0.42 -0.84 16 7 C -0.13 0.18 7.44 -25.82 -0.19 -0.02 16 8 C 0.12 -0.11 4.21 -67.12 -0.28 -0.40 16 9 H 0.13 -0.06 7.50 -51.93 -0.39 -0.45 16 10 N -0.70 -0.07 5.35 -53.86 -0.29 -0.36 16 11 C 0.58 1.31 7.81 -12.18 -0.10 1.22 16 12 O -0.53 -2.60 15.94 5.36 0.09 -2.52 16 13 C 0.08 0.11 6.75 -83.01 -0.56 -0.45 16 14 N -0.45 -0.30 9.54 -9.80 -0.09 -0.39 16 15 C 0.10 -0.10 9.84 -17.57 -0.17 -0.27 16 16 C -0.15 0.20 5.40 -104.36 -0.56 -0.36 16 17 C -0.07 0.16 2.83 36.00 0.10 0.26 16 18 O -0.53 0.30 12.78 -35.23 -0.45 -0.15 16 19 Si 0.68 -1.82 29.82 -169.99 -5.07 -6.89 16 20 C -0.05 0.05 9.76 -39.31 -0.38 -0.34 16 21 C -0.11 -0.05 9.63 -39.05 -0.38 -0.42 16 22 C -0.13 0.19 7.15 -25.92 -0.19 0.00 16 23 H 0.10 -0.31 8.14 -51.92 -0.42 -0.73 16 24 H 0.06 -0.04 8.13 -51.93 -0.42 -0.46 16 25 H 0.06 -0.04 8.13 -51.93 -0.42 -0.46 16 26 H 0.09 -0.08 8.10 -51.93 -0.42 -0.50 16 27 H 0.09 -0.15 8.14 -51.93 -0.42 -0.57 16 28 H 0.41 -0.36 8.04 -40.82 -0.33 -0.69 16 29 H 0.16 -0.52 4.89 -52.48 -0.26 -0.78 16 30 H 0.13 -0.38 7.96 -51.93 -0.41 -0.79 16 31 H 0.38 -1.23 8.70 45.56 0.40 -0.84 16 32 H -0.25 0.19 7.11 56.52 0.40 0.60 16 33 H -0.25 -0.21 7.11 56.52 0.40 0.19 16 34 H 0.15 -0.32 8.06 -52.48 -0.42 -0.74 16 35 H 0.15 0.01 7.64 -52.49 -0.40 -0.39 16 36 H 0.09 -0.21 8.14 -51.93 -0.42 -0.63 16 37 H 0.10 -0.06 7.41 -51.93 -0.38 -0.45 16 LS Contribution 324.14 15.07 4.88 4.88 Total: 0.00 -8.49 324.14 -7.75 -16.24 By element: Atomic # 1 Polarization: -4.19 SS G_CDS: -4.35 Total: -8.54 kcal Atomic # 6 Polarization: 2.78 SS G_CDS: -1.76 Total: 1.02 kcal Atomic # 7 Polarization: -0.36 SS G_CDS: -0.38 Total: -0.75 kcal Atomic # 8 Polarization: -4.90 SS G_CDS: -1.07 Total: -5.97 kcal Atomic # 14 Polarization: -1.82 SS G_CDS: -5.07 Total: -6.89 kcal Total LS contribution 4.88 Total: 4.88 kcal Total: -8.49 -7.75 -16.24 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10970304_13287726.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -64.941 kcal (2) G-P(sol) polarization free energy of solvation -8.490 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -73.431 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.753 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.243 kcal (6) G-S(sol) free energy of system = (1) + (5) -81.184 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.55 seconds