Wall clock time and date at job start Sat Mar 6 2021 15:35:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45198 * 1 3 3 C 1.34227 * 116.99800 * 2 1 4 4 O 1.20824 * 120.00392 * 359.97438 * 3 2 1 5 5 C 1.50704 * 119.99955 * 179.97438 * 3 2 1 6 6 H 1.09000 * 112.85094 * 311.19796 * 5 3 2 7 7 C 1.53958 * 113.66402 * 82.43923 * 5 3 2 8 8 C 1.53785 * 87.01607 * 139.93175 * 7 5 3 9 9 H 1.09005 * 113.61481 * 89.22981 * 8 7 5 10 10 N 1.46496 * 113.61647 * 220.04704 * 8 7 5 11 11 C 1.34776 * 120.00019 * 254.14124 * 10 8 7 12 12 O 1.21512 * 120.00320 * 359.97438 * 11 10 8 13 13 C 1.48176 * 119.99822 * 179.97438 * 11 10 8 14 14 N 1.32713 * 119.72649 * 359.97438 * 13 11 10 15 15 C 1.31518 * 121.64516 * 179.72544 * 14 13 11 16 16 C 1.38556 * 120.90281 * 0.58770 * 15 14 13 17 17 C 1.50696 * 120.32642 * 179.69729 * 16 15 14 18 18 O 1.42903 * 109.47131 * 119.72172 * 17 16 15 19 19 Si 1.86305 * 109.47185 * 359.72713 * 17 16 15 20 20 C 1.38624 * 119.35081 * 359.42748 * 16 15 14 21 21 C 1.38592 * 118.49041 * 0.27463 * 20 16 15 22 22 C 1.53774 * 87.17400 * 334.64018 * 8 7 5 23 23 H 1.09007 * 109.47009 * 180.02562 * 1 2 3 24 24 H 1.08995 * 109.47745 * 299.99882 * 1 2 3 25 25 H 1.09004 * 109.47026 * 60.00185 * 1 2 3 26 26 H 1.08997 * 113.61484 * 25.41545 * 7 5 3 27 27 H 1.08994 * 113.66666 * 254.45981 * 7 5 3 28 28 H 0.96997 * 119.99880 * 74.13525 * 10 8 7 29 29 H 1.08003 * 119.54985 * 180.31102 * 15 14 13 30 30 H 1.08999 * 109.47358 * 239.72532 * 17 16 15 31 31 H 0.96700 * 114.00311 * 300.00591 * 18 17 16 32 32 H 1.48499 * 109.99670 * 58.67633 * 19 17 16 33 33 H 1.48497 * 110.00233 * 179.97438 * 19 17 16 34 34 H 1.08006 * 120.75638 * 180.25509 * 20 16 15 35 35 H 1.07994 * 120.47349 * 180.02562 * 21 20 16 36 36 H 1.09006 * 113.61513 * 139.93828 * 22 8 7 37 37 H 1.09005 * 113.61706 * 270.75242 * 22 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1960 0.0000 4 8 1.4033 2.2093 -0.0005 5 6 3.5663 1.2749 0.0006 6 1 4.0233 0.6365 0.7567 7 6 4.1937 1.1217 -1.3970 8 6 5.1813 2.2267 -0.9866 9 1 6.0816 1.8495 -0.5013 10 7 5.4708 3.1827 -2.0582 11 6 6.6575 3.1413 -2.6958 12 8 7.4875 2.3114 -2.3816 13 6 6.9500 4.1080 -3.7801 14 7 6.0394 5.0119 -4.1192 15 6 6.2611 5.8909 -5.0720 16 6 7.4582 5.8974 -5.7697 17 6 7.6959 6.9062 -6.8636 18 8 8.8304 7.7096 -6.5324 19 14 6.1946 7.9949 -7.0413 20 6 8.4373 4.9704 -5.4477 21 6 8.1785 4.0600 -4.4353 22 6 4.1077 2.7142 0.0005 23 1 -0.3633 -1.0277 0.0005 24 1 -0.3634 0.5138 0.8899 25 1 -0.3633 0.5138 -0.8900 26 1 3.5269 1.4116 -2.2091 27 1 4.6657 0.1530 -1.5609 28 1 4.8084 3.8455 -2.3089 29 1 5.4980 6.6148 -5.3170 30 1 7.8810 6.3862 -7.8035 31 1 8.7357 8.2022 -5.7057 32 1 5.9130 8.6852 -5.7570 33 1 6.4166 8.9946 -8.1167 34 1 9.3804 4.9577 -5.9740 35 1 8.9187 3.3242 -4.1580 36 1 4.5104 3.0293 0.9632 37 1 3.4182 3.4415 -0.4283 There are 53 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 53 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10970304_13287726.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:35:14 Heat of formation + Delta-G solvation = -82.090967 kcal Electronic energy + Delta-G solvation = -22557.159506 eV Core-core repulsion = 18881.466146 eV Total energy + Delta-G solvation = -3675.693360 eV No. of doubly occupied orbitals = 53 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 293.114 amu Computer time = 0.67 seconds Orbital eigenvalues (eV) -42.10933 -41.72429 -40.52729 -39.12326 -38.00411 -37.43409 -34.84649 -33.60328 -32.96851 -29.46879 -28.10202 -26.84337 -26.61748 -25.02927 -24.01573 -22.55512 -21.76313 -20.82871 -19.16313 -18.99026 -18.67150 -18.05826 -17.59765 -17.41811 -16.81541 -16.54206 -16.41676 -16.18169 -16.10940 -15.91038 -15.18649 -14.67215 -14.46018 -14.36141 -14.32977 -14.17171 -13.63635 -13.51263 -13.48380 -13.01173 -12.64512 -12.54618 -12.36828 -12.13855 -11.85001 -11.81659 -11.46944 -11.39264 -11.09888 -10.70742 -10.66161 -10.38524 -10.10464 -4.93182 -0.60664 0.07879 1.06019 1.23670 1.51801 1.59205 1.63465 1.96374 2.04138 2.64774 2.93897 3.23415 3.31158 3.32303 3.49503 3.63218 3.66705 3.75569 3.79296 3.93605 4.02144 4.13223 4.26589 4.29013 4.47404 4.48088 4.56576 4.60463 4.62877 4.69018 4.82350 4.87527 4.91474 4.98306 5.05860 5.32879 5.37522 5.43266 6.25192 6.41642 6.59838 6.65124 7.00506 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.363 6.363 3 C 0.471 3.529 4 O -0.537 6.537 5 C -0.103 4.103 6 H 0.155 0.845 7 C -0.128 4.128 8 C 0.121 3.879 9 H 0.123 0.877 10 N -0.691 5.691 11 C 0.572 3.428 12 O -0.561 6.561 13 C 0.062 3.938 14 N -0.461 5.461 15 C 0.100 3.900 16 C -0.139 4.139 17 C -0.077 4.077 18 O -0.543 6.543 19 Si 0.764 3.236 20 C -0.053 4.053 21 C -0.114 4.114 22 C -0.120 4.120 23 H 0.128 0.872 24 H 0.061 0.939 25 H 0.061 0.939 26 H 0.087 0.913 27 H 0.097 0.903 28 H 0.419 0.581 29 H 0.185 0.815 30 H 0.138 0.862 31 H 0.388 0.612 32 H -0.277 1.277 33 H -0.299 1.299 34 H 0.162 0.838 35 H 0.151 0.849 36 H 0.101 0.899 37 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.043 -0.720 -1.482 2.625 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.279 6.279 3 C 0.315 3.685 4 O -0.426 6.426 5 C -0.123 4.123 6 H 0.173 0.827 7 C -0.167 4.167 8 C 0.017 3.983 9 H 0.141 0.859 10 N -0.342 5.342 11 C 0.358 3.642 12 O -0.440 6.440 13 C -0.075 4.075 14 N -0.173 5.173 15 C -0.060 4.060 16 C -0.142 4.142 17 C -0.186 4.186 18 O -0.352 6.352 19 Si 0.668 3.332 20 C -0.079 4.079 21 C -0.135 4.135 22 C -0.158 4.158 23 H 0.146 0.854 24 H 0.080 0.920 25 H 0.080 0.920 26 H 0.106 0.894 27 H 0.116 0.884 28 H 0.257 0.743 29 H 0.201 0.799 30 H 0.156 0.844 31 H 0.238 0.762 32 H -0.203 1.203 33 H -0.227 1.227 34 H 0.179 0.821 35 H 0.169 0.831 36 H 0.120 0.880 37 H 0.114 0.886 Dipole moment (debyes) X Y Z Total from point charges -2.594 -0.509 -1.269 2.932 hybrid contribution 1.006 0.804 0.225 1.307 sum -1.588 0.294 -1.044 1.923 Atomic orbital electron populations 1.23527 0.75053 1.05585 1.02460 1.86521 1.24751 1.33153 1.83471 1.23977 0.92494 0.81016 0.70965 1.90669 1.67880 1.37380 1.46717 1.22458 0.85972 1.01467 1.02374 0.82741 1.23443 0.97534 1.01174 0.94539 1.22567 0.98041 0.89729 0.88009 0.85920 1.45786 1.16798 1.35741 1.35835 1.18089 0.82179 0.82701 0.81250 1.90788 1.47955 1.38823 1.66387 1.21114 0.92634 0.96078 0.97684 1.67508 1.32031 1.03043 1.14683 1.22994 0.96097 0.96094 0.90778 1.21679 0.95412 0.98269 0.98833 1.25187 0.99383 0.95613 0.98425 1.86612 1.39259 1.62567 1.46717 0.94121 0.80372 0.80478 0.78227 1.21739 1.00000 0.91499 0.94612 1.22296 0.96941 0.99295 0.94978 1.23323 0.96467 0.94805 1.01174 0.85423 0.91991 0.92038 0.89412 0.88445 0.74328 0.79889 0.84426 0.76225 1.20308 1.22717 0.82079 0.83138 0.88013 0.88626 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 113.37 1.20 1.16 16 2 O -0.36 -0.93 10.57 -51.38 -0.54 -1.48 16 3 C 0.47 1.59 7.49 71.24 0.53 2.12 16 4 O -0.54 -5.01 15.65 21.97 0.34 -4.67 16 5 C -0.10 0.29 4.26 -10.95 -0.05 0.24 16 6 H 0.16 -1.13 8.14 -2.39 -0.02 -1.15 16 7 C -0.13 0.32 7.44 31.18 0.23 0.55 16 8 C 0.12 -0.18 4.21 45.52 0.19 0.01 16 9 H 0.12 -0.06 7.50 -2.38 -0.02 -0.08 16 10 N -0.69 -0.65 5.35 -442.60 -2.37 -3.02 16 11 C 0.57 3.24 7.81 86.88 0.68 3.92 16 12 O -0.56 -6.33 15.94 -3.75 -0.06 -6.39 16 13 C 0.06 0.22 6.75 41.91 0.28 0.50 16 14 N -0.46 -0.65 9.54 -184.91 -1.76 -2.42 16 15 C 0.10 -0.26 9.84 84.82 0.83 0.58 16 16 C -0.14 0.49 5.40 -19.70 -0.11 0.38 16 17 C -0.08 0.40 2.83 71.23 0.20 0.61 16 18 O -0.54 1.02 12.78 -148.98 -1.90 -0.88 16 19 Si 0.76 -4.48 29.82 68.60 2.05 -2.44 16 20 C -0.05 0.11 9.76 22.45 0.22 0.33 16 21 C -0.11 -0.17 9.63 22.61 0.22 0.05 16 22 C -0.12 0.35 7.15 31.12 0.22 0.57 16 23 H 0.13 -0.85 8.14 -2.38 -0.02 -0.87 16 24 H 0.06 -0.05 8.13 -2.39 -0.02 -0.07 16 25 H 0.06 -0.04 8.13 -2.38 -0.02 -0.06 16 26 H 0.09 -0.11 8.10 -2.39 -0.02 -0.13 16 27 H 0.10 -0.34 8.14 -2.39 -0.02 -0.36 16 28 H 0.42 -0.44 8.04 -92.71 -0.75 -1.19 16 29 H 0.18 -1.38 4.89 -2.91 -0.01 -1.40 16 30 H 0.14 -1.03 7.96 -2.39 -0.02 -1.05 16 31 H 0.39 -2.76 8.70 -74.06 -0.64 -3.41 16 32 H -0.28 0.59 7.11 99.48 0.71 1.30 16 33 H -0.30 -0.72 7.11 99.48 0.71 -0.02 16 34 H 0.16 -0.82 8.06 -2.91 -0.02 -0.85 16 35 H 0.15 0.21 7.64 -2.91 -0.02 0.18 16 36 H 0.10 -0.52 8.14 -2.38 -0.02 -0.54 16 37 H 0.10 -0.06 7.41 -2.38 -0.02 -0.07 16 Total: 0.00 -20.20 324.14 0.18 -20.02 By element: Atomic # 1 Polarization: -9.53 SS G_CDS: -0.23 Total: -9.76 kcal Atomic # 6 Polarization: 6.38 SS G_CDS: 4.66 Total: 11.03 kcal Atomic # 7 Polarization: -1.31 SS G_CDS: -4.13 Total: -5.44 kcal Atomic # 8 Polarization: -11.26 SS G_CDS: -2.16 Total: -13.42 kcal Atomic # 14 Polarization: -4.48 SS G_CDS: 2.05 Total: -2.44 kcal Total: -20.20 0.18 -20.02 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10970304_13287726.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -62.076 kcal (2) G-P(sol) polarization free energy of solvation -20.198 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -82.274 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.183 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.015 kcal (6) G-S(sol) free energy of system = (1) + (5) -82.091 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.68 seconds