Wall clock time and date at job start Sat Mar 6 2021 15:35:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45197 * 1 3 3 C 1.34234 * 116.99941 * 2 1 4 4 O 1.20819 * 120.00052 * 0.02562 * 3 2 1 5 5 C 1.50697 * 119.99798 * 180.02562 * 3 2 1 6 6 H 1.09001 * 112.85331 * 48.80539 * 5 3 2 7 7 C 1.53780 * 113.61455 * 180.02562 * 5 3 2 8 8 C 1.53778 * 87.08409 * 139.98312 * 7 5 3 9 9 H 1.08998 * 113.61989 * 89.19805 * 8 7 5 10 10 N 1.46504 * 113.61763 * 220.02239 * 8 7 5 11 11 C 1.34770 * 120.00078 * 203.46921 * 10 8 7 12 12 O 1.21624 * 120.00131 * 359.97438 * 11 10 8 13 13 C 1.47267 * 119.99734 * 179.97438 * 11 10 8 14 14 C 1.36765 * 126.94555 * 359.97438 * 13 11 10 15 15 N 1.34661 * 108.39851 * 179.79133 * 14 13 11 16 16 C 1.46497 * 124.84931 * 180.22666 * 15 14 13 17 17 C 1.36447 * 110.29465 * 0.38198 * 15 14 13 18 18 C 1.50699 * 125.57031 * 179.88258 * 17 15 14 19 19 O 1.42903 * 109.47152 * 329.71703 * 18 17 15 20 20 Si 1.86293 * 109.47431 * 209.71594 * 18 17 15 21 21 C 1.34487 * 108.85975 * 359.61208 * 17 15 14 22 22 C 1.53782 * 87.17198 * 334.61192 * 8 7 5 23 23 H 1.09003 * 109.46668 * 300.00104 * 1 2 3 24 24 H 1.08998 * 109.47363 * 59.99296 * 1 2 3 25 25 H 1.08994 * 109.47115 * 179.97438 * 1 2 3 26 26 H 1.08997 * 113.61563 * 25.43159 * 7 5 3 27 27 H 1.09003 * 113.69110 * 254.54213 * 7 5 3 28 28 H 0.97000 * 119.99744 * 23.46649 * 10 8 7 29 29 H 1.08007 * 125.80048 * 0.02562 * 14 13 11 30 30 H 1.08999 * 109.46945 * 270.17065 * 16 15 14 31 31 H 1.08998 * 109.47463 * 30.17964 * 16 15 14 32 32 H 1.08997 * 109.46992 * 150.18085 * 16 15 14 33 33 H 1.09008 * 109.47393 * 89.71098 * 18 17 15 34 34 H 0.96700 * 114.00311 * 180.02562 * 19 18 17 35 35 H 1.48501 * 109.99918 * 298.67862 * 20 18 17 36 36 H 1.48506 * 109.99973 * 59.99460 * 20 18 17 37 37 H 1.08002 * 126.83610 * 180.24728 * 21 17 15 38 38 H 1.08992 * 113.61441 * 139.94203 * 22 8 7 39 39 H 1.09000 * 113.61287 * 270.84322 * 22 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2749 -0.0006 6 1 4.0233 0.6365 -0.7567 7 6 4.1077 2.7142 0.0001 8 6 5.1815 2.2262 0.9869 9 1 6.0816 1.8491 0.5015 10 7 5.4710 3.1817 2.0590 11 6 6.6577 3.1400 2.6965 12 8 7.4881 2.3088 2.3821 13 6 6.9489 4.1009 3.7739 14 6 6.1251 5.0883 4.2395 15 7 6.7623 5.7416 5.2298 16 6 6.2042 6.8654 5.9859 17 6 8.0033 5.2093 5.4260 18 6 9.0076 5.6798 6.4462 19 8 8.8368 7.0805 6.6721 20 14 10.7308 5.3582 5.8156 21 6 8.1814 4.1924 4.5641 22 6 4.1938 1.1210 1.3968 23 1 -0.3633 0.5139 0.8900 24 1 -0.3634 0.5139 -0.8899 25 1 -0.3633 -1.0276 -0.0005 26 1 3.4175 3.4402 0.4298 27 1 4.5105 3.0311 -0.9619 28 1 4.8086 3.8444 2.3100 29 1 5.1309 5.3047 3.8774 30 1 6.4561 7.8005 5.4858 31 1 5.1204 6.7635 6.0415 32 1 6.6210 6.8684 6.9930 33 1 8.8561 5.1400 7.3811 34 1 9.4518 7.4526 7.3189 35 1 10.9317 3.9017 5.6071 36 1 10.9499 6.0887 4.5413 37 1 9.0574 3.5674 4.4722 38 1 4.6658 0.1523 1.5603 39 1 3.5271 1.4106 2.2091 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10970304_13287730.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:35:17 Heat of formation + Delta-G solvation = -69.702955 kcal Electronic energy + Delta-G solvation = -23310.880079 eV Core-core repulsion = 19608.412425 eV Total energy + Delta-G solvation = -3702.467654 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 295.130 amu Computer time = 0.58 seconds Orbital eigenvalues (eV) -42.46257 -41.86164 -40.42484 -38.85694 -37.80255 -37.28055 -34.46651 -33.74018 -31.56809 -29.40342 -27.89595 -26.88307 -26.83977 -25.99934 -23.85220 -22.17679 -21.23475 -20.68578 -20.18717 -18.93487 -18.48416 -18.41197 -17.86318 -17.36259 -17.01710 -16.77357 -16.22652 -16.17343 -15.76279 -15.43908 -15.37159 -14.82807 -14.67404 -14.35987 -14.15507 -13.69379 -13.64748 -13.53775 -13.45788 -13.26636 -13.17906 -13.00863 -12.75468 -12.49722 -12.30633 -11.89813 -11.81178 -11.77995 -11.33617 -10.79207 -10.69939 -10.01922 -9.59338 -9.20506 -5.02016 0.75089 1.01677 1.16637 1.42492 1.66637 1.70009 1.90265 2.08759 2.33981 2.63494 3.07467 3.21799 3.29899 3.61511 3.65531 3.72420 3.76224 3.81761 3.98190 4.15283 4.16516 4.23326 4.24525 4.32863 4.40196 4.50707 4.52718 4.57497 4.59393 4.60208 4.77236 4.84784 4.86822 4.93526 5.13066 5.38743 5.53392 5.67560 5.97243 6.13234 6.39605 6.62866 6.74120 7.43408 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.356 6.356 3 C 0.473 3.527 4 O -0.506 6.506 5 C -0.109 4.109 6 H 0.132 0.868 7 C -0.126 4.126 8 C 0.129 3.871 9 H 0.124 0.876 10 N -0.721 5.721 11 C 0.594 3.406 12 O -0.541 6.541 13 C -0.227 4.227 14 C 0.052 3.948 15 N -0.421 5.421 16 C 0.075 3.925 17 C 0.028 3.972 18 C -0.047 4.047 19 O -0.552 6.552 20 Si 0.708 3.292 21 C -0.145 4.145 22 C -0.134 4.134 23 H 0.063 0.937 24 H 0.064 0.936 25 H 0.103 0.897 26 H 0.102 0.898 27 H 0.089 0.911 28 H 0.399 0.601 29 H 0.173 0.827 30 H 0.078 0.922 31 H 0.079 0.921 32 H 0.096 0.904 33 H 0.079 0.921 34 H 0.388 0.612 35 H -0.252 1.252 36 H -0.252 1.252 37 H 0.150 0.850 38 H 0.090 0.910 39 H 0.090 0.910 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.797 2.914 4.618 5.519 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.273 6.273 3 C 0.315 3.685 4 O -0.394 6.394 5 C -0.129 4.129 6 H 0.150 0.850 7 C -0.165 4.165 8 C 0.023 3.977 9 H 0.142 0.858 10 N -0.372 5.372 11 C 0.383 3.617 12 O -0.418 6.418 13 C -0.238 4.238 14 C -0.085 4.085 15 N -0.095 5.095 16 C -0.066 4.066 17 C -0.082 4.082 18 C -0.157 4.157 19 O -0.359 6.359 20 Si 0.607 3.393 21 C -0.169 4.169 22 C -0.173 4.173 23 H 0.082 0.918 24 H 0.083 0.917 25 H 0.122 0.878 26 H 0.120 0.880 27 H 0.107 0.893 28 H 0.234 0.766 29 H 0.190 0.810 30 H 0.097 0.903 31 H 0.098 0.902 32 H 0.115 0.885 33 H 0.097 0.903 34 H 0.236 0.764 35 H -0.176 1.176 36 H -0.177 1.177 37 H 0.167 0.833 38 H 0.109 0.891 39 H 0.109 0.891 Dipole moment (debyes) X Y Z Total from point charges -0.526 2.498 3.514 4.344 hybrid contribution -1.446 0.236 0.033 1.465 sum -1.971 2.733 3.547 4.893 Atomic orbital electron populations 1.23320 0.75980 1.04017 1.02664 1.86526 1.23688 1.33294 1.83759 1.23496 0.91598 0.81397 0.71964 1.90674 1.67010 1.36453 1.45225 1.22351 0.87587 1.01027 1.01938 0.85036 1.23371 0.97186 0.94860 1.01035 1.22387 0.97687 0.89536 0.88053 0.85825 1.45754 1.17581 1.36364 1.37476 1.17387 0.81084 0.82713 0.80471 1.90782 1.46853 1.38281 1.65922 1.20232 0.97216 1.02316 1.03998 1.21942 0.98781 0.95212 0.92518 1.43493 1.12138 1.26377 1.27471 1.22183 0.99018 0.87603 0.97805 1.19794 0.86818 0.98879 1.02670 1.24400 1.06993 0.84904 0.99357 1.86418 1.62327 1.20673 1.66525 0.95663 0.76973 0.81836 0.84872 1.21597 0.98533 0.99773 0.97010 1.23492 0.97996 1.01367 0.94414 0.91808 0.91735 0.87836 0.87992 0.89276 0.76607 0.80991 0.90303 0.90204 0.88542 0.90322 0.76381 1.17633 1.17660 0.83260 0.89142 0.89107 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 10.56 101.05 1.07 1.06 16 2 O -0.36 -0.63 10.57 -39.27 -0.41 -1.04 16 3 C 0.47 0.95 7.49 36.00 0.27 1.22 16 4 O -0.51 -2.31 15.65 -18.74 -0.29 -2.60 16 5 C -0.11 0.06 4.26 -90.87 -0.39 -0.32 16 6 H 0.13 -0.30 8.14 -51.93 -0.42 -0.72 16 7 C -0.13 0.11 7.15 -25.92 -0.19 -0.07 16 8 C 0.13 0.02 4.21 -67.12 -0.28 -0.26 16 9 H 0.12 0.15 7.50 -51.93 -0.39 -0.24 16 10 N -0.72 -0.55 5.35 -54.14 -0.29 -0.84 16 11 C 0.59 2.63 7.81 -12.59 -0.10 2.53 16 12 O -0.54 -4.49 16.59 5.26 0.09 -4.40 16 13 C -0.23 -0.83 6.29 -103.35 -0.65 -1.48 16 14 C 0.05 0.04 10.83 -16.84 -0.18 -0.14 16 15 N -0.42 -0.49 3.09 -119.90 -0.37 -0.86 16 16 C 0.07 -0.14 9.81 59.85 0.59 0.45 16 17 C 0.03 0.07 6.17 -81.87 -0.50 -0.44 16 18 C -0.05 0.04 2.85 36.01 0.10 0.14 16 19 O -0.55 1.09 10.31 -35.23 -0.36 0.73 16 20 Si 0.71 -0.65 31.23 -169.99 -5.31 -5.96 16 21 C -0.15 -0.64 9.49 -37.50 -0.36 -0.99 16 22 C -0.13 0.05 7.44 -25.83 -0.19 -0.14 16 23 H 0.06 -0.02 8.13 -51.93 -0.42 -0.44 16 24 H 0.06 -0.02 8.13 -51.93 -0.42 -0.44 16 25 H 0.10 -0.27 8.14 -51.93 -0.42 -0.69 16 26 H 0.10 -0.04 7.40 -51.93 -0.38 -0.43 16 27 H 0.09 -0.14 8.14 -51.93 -0.42 -0.57 16 28 H 0.40 -0.72 7.65 -40.82 -0.31 -1.03 16 29 H 0.17 -0.52 7.45 -52.48 -0.39 -0.91 16 30 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 31 H 0.08 -0.30 8.13 -51.93 -0.42 -0.72 16 32 H 0.10 -0.20 6.74 -51.93 -0.35 -0.55 16 33 H 0.08 -0.19 7.96 -51.92 -0.41 -0.60 16 34 H 0.39 -2.63 8.74 45.56 0.40 -2.23 16 35 H -0.25 -0.51 6.89 56.52 0.39 -0.12 16 36 H -0.25 -0.80 7.11 56.52 0.40 -0.40 16 37 H 0.15 0.73 6.74 -52.49 -0.35 0.38 16 38 H 0.09 -0.04 8.14 -51.93 -0.42 -0.46 16 39 H 0.09 -0.02 8.10 -51.93 -0.42 -0.44 16 LS Contribution 334.55 15.07 5.04 5.04 Total: 0.00 -11.63 334.55 -7.93 -19.56 By element: Atomic # 1 Polarization: -5.97 SS G_CDS: -5.21 Total: -11.17 kcal Atomic # 6 Polarization: 2.36 SS G_CDS: -0.81 Total: 1.55 kcal Atomic # 7 Polarization: -1.04 SS G_CDS: -0.66 Total: -1.70 kcal Atomic # 8 Polarization: -6.33 SS G_CDS: -0.98 Total: -7.31 kcal Atomic # 14 Polarization: -0.65 SS G_CDS: -5.31 Total: -5.96 kcal Total LS contribution 5.04 Total: 5.04 kcal Total: -11.63 -7.93 -19.56 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10970304_13287730.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -50.143 kcal (2) G-P(sol) polarization free energy of solvation -11.628 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -61.771 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.932 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.560 kcal (6) G-S(sol) free energy of system = (1) + (5) -69.703 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.58 seconds