Wall clock time and date at job start Sat Mar 6 2021 15:35:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45197 * 1 3 3 C 1.34234 * 116.99941 * 2 1 4 4 O 1.20819 * 120.00052 * 0.02562 * 3 2 1 5 5 C 1.50697 * 119.99798 * 180.02562 * 3 2 1 6 6 H 1.09001 * 112.85331 * 48.80539 * 5 3 2 7 7 C 1.53780 * 113.61455 * 180.02562 * 5 3 2 8 8 C 1.53778 * 87.08409 * 139.98312 * 7 5 3 9 9 H 1.08998 * 113.61989 * 89.19805 * 8 7 5 10 10 N 1.46504 * 113.61763 * 220.02239 * 8 7 5 11 11 C 1.34770 * 120.00078 * 203.46921 * 10 8 7 12 12 O 1.21624 * 120.00131 * 359.97438 * 11 10 8 13 13 C 1.47267 * 119.99734 * 179.97438 * 11 10 8 14 14 C 1.36765 * 126.94555 * 359.97438 * 13 11 10 15 15 N 1.34661 * 108.39851 * 179.79133 * 14 13 11 16 16 C 1.46497 * 124.84931 * 180.22666 * 15 14 13 17 17 C 1.36447 * 110.29465 * 0.38198 * 15 14 13 18 18 C 1.50699 * 125.57031 * 179.88258 * 17 15 14 19 19 O 1.42903 * 109.47152 * 329.71703 * 18 17 15 20 20 Si 1.86293 * 109.47431 * 209.71594 * 18 17 15 21 21 C 1.34487 * 108.85975 * 359.61208 * 17 15 14 22 22 C 1.53782 * 87.17198 * 334.61192 * 8 7 5 23 23 H 1.09003 * 109.46668 * 300.00104 * 1 2 3 24 24 H 1.08998 * 109.47363 * 59.99296 * 1 2 3 25 25 H 1.08994 * 109.47115 * 179.97438 * 1 2 3 26 26 H 1.08997 * 113.61563 * 25.43159 * 7 5 3 27 27 H 1.09003 * 113.69110 * 254.54213 * 7 5 3 28 28 H 0.97000 * 119.99744 * 23.46649 * 10 8 7 29 29 H 1.08007 * 125.80048 * 0.02562 * 14 13 11 30 30 H 1.08999 * 109.46945 * 270.17065 * 16 15 14 31 31 H 1.08998 * 109.47463 * 30.17964 * 16 15 14 32 32 H 1.08997 * 109.46992 * 150.18085 * 16 15 14 33 33 H 1.09008 * 109.47393 * 89.71098 * 18 17 15 34 34 H 0.96700 * 114.00311 * 180.02562 * 19 18 17 35 35 H 1.48501 * 109.99918 * 298.67862 * 20 18 17 36 36 H 1.48506 * 109.99973 * 59.99460 * 20 18 17 37 37 H 1.08002 * 126.83610 * 180.24728 * 21 17 15 38 38 H 1.08992 * 113.61441 * 139.94203 * 22 8 7 39 39 H 1.09000 * 113.61287 * 270.84322 * 22 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2749 -0.0006 6 1 4.0233 0.6365 -0.7567 7 6 4.1077 2.7142 0.0001 8 6 5.1815 2.2262 0.9869 9 1 6.0816 1.8491 0.5015 10 7 5.4710 3.1817 2.0590 11 6 6.6577 3.1400 2.6965 12 8 7.4881 2.3088 2.3821 13 6 6.9489 4.1009 3.7739 14 6 6.1251 5.0883 4.2395 15 7 6.7623 5.7416 5.2298 16 6 6.2042 6.8654 5.9859 17 6 8.0033 5.2093 5.4260 18 6 9.0076 5.6798 6.4462 19 8 8.8368 7.0805 6.6721 20 14 10.7308 5.3582 5.8156 21 6 8.1814 4.1924 4.5641 22 6 4.1938 1.1210 1.3968 23 1 -0.3633 0.5139 0.8900 24 1 -0.3634 0.5139 -0.8899 25 1 -0.3633 -1.0276 -0.0005 26 1 3.4175 3.4402 0.4298 27 1 4.5105 3.0311 -0.9619 28 1 4.8086 3.8444 2.3100 29 1 5.1309 5.3047 3.8774 30 1 6.4561 7.8005 5.4858 31 1 5.1204 6.7635 6.0415 32 1 6.6210 6.8684 6.9930 33 1 8.8561 5.1400 7.3811 34 1 9.4518 7.4526 7.3189 35 1 10.9317 3.9017 5.6071 36 1 10.9499 6.0887 4.5413 37 1 9.0574 3.5674 4.4722 38 1 4.6658 0.1523 1.5603 39 1 3.5271 1.4106 2.2091 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10970304_13287730.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:35:16 Heat of formation + Delta-G solvation = -72.728086 kcal Electronic energy + Delta-G solvation = -23311.011258 eV Core-core repulsion = 19608.412425 eV Total energy + Delta-G solvation = -3702.598833 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 295.130 amu Computer time = 0.73 seconds Orbital eigenvalues (eV) -42.56276 -41.96503 -40.60995 -39.02635 -37.66798 -37.44811 -34.69152 -33.77917 -31.62616 -29.42948 -27.88721 -26.86315 -26.84918 -26.01312 -23.98450 -22.28566 -21.39019 -20.75585 -20.26445 -19.03033 -18.50848 -18.30154 -17.98477 -17.45903 -17.16828 -16.80257 -16.28826 -16.23515 -15.85812 -15.51376 -15.37193 -14.92782 -14.80109 -14.46662 -14.26304 -13.77768 -13.66536 -13.56653 -13.39474 -13.25870 -13.19538 -13.02329 -12.75655 -12.53409 -12.36337 -12.04096 -11.87309 -11.83197 -11.45744 -11.12364 -10.62890 -10.21175 -9.73089 -9.29960 -5.03193 0.59956 0.92453 1.03344 1.36998 1.62980 1.65119 1.89652 2.06426 2.23942 2.38842 3.19941 3.21731 3.29912 3.64459 3.66821 3.73053 3.75523 3.86962 3.98887 4.21467 4.24441 4.27002 4.30595 4.38843 4.49624 4.50485 4.55468 4.60547 4.66586 4.67995 4.77566 4.80987 4.85452 4.89440 5.08561 5.30416 5.42663 5.50832 5.85312 6.13175 6.51646 6.62267 6.83146 7.20793 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.364 6.364 3 C 0.473 3.527 4 O -0.535 6.535 5 C -0.104 4.104 6 H 0.151 0.849 7 C -0.116 4.116 8 C 0.124 3.876 9 H 0.111 0.889 10 N -0.704 5.704 11 C 0.591 3.409 12 O -0.594 6.594 13 C -0.262 4.262 14 C 0.073 3.927 15 N -0.422 5.422 16 C 0.071 3.929 17 C 0.021 3.979 18 C -0.042 4.042 19 O -0.558 6.558 20 Si 0.801 3.199 21 C -0.187 4.187 22 C -0.129 4.129 23 H 0.062 0.938 24 H 0.062 0.938 25 H 0.127 0.873 26 H 0.101 0.899 27 H 0.099 0.901 28 H 0.414 0.586 29 H 0.214 0.786 30 H 0.081 0.919 31 H 0.105 0.895 32 H 0.101 0.899 33 H 0.105 0.895 34 H 0.410 0.590 35 H -0.301 1.301 36 H -0.312 1.312 37 H 0.127 0.873 38 H 0.090 0.910 39 H 0.091 0.909 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.338 4.119 5.649 7.372 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.280 6.280 3 C 0.317 3.683 4 O -0.425 6.425 5 C -0.124 4.124 6 H 0.168 0.832 7 C -0.154 4.154 8 C 0.018 3.982 9 H 0.129 0.871 10 N -0.355 5.355 11 C 0.381 3.619 12 O -0.475 6.475 13 C -0.272 4.272 14 C -0.064 4.064 15 N -0.095 5.095 16 C -0.069 4.069 17 C -0.089 4.089 18 C -0.152 4.152 19 O -0.369 6.369 20 Si 0.708 3.292 21 C -0.211 4.211 22 C -0.168 4.168 23 H 0.080 0.920 24 H 0.081 0.919 25 H 0.145 0.855 26 H 0.119 0.881 27 H 0.118 0.882 28 H 0.251 0.749 29 H 0.230 0.770 30 H 0.099 0.901 31 H 0.123 0.877 32 H 0.120 0.880 33 H 0.122 0.878 34 H 0.263 0.737 35 H -0.229 1.229 36 H -0.240 1.240 37 H 0.145 0.855 38 H 0.108 0.892 39 H 0.109 0.891 Dipole moment (debyes) X Y Z Total from point charges -2.099 3.742 4.593 6.285 hybrid contribution -0.981 -0.133 -0.331 1.044 sum -3.080 3.608 4.262 6.378 Atomic orbital electron populations 1.23530 0.74986 1.05592 1.02510 1.86527 1.24819 1.33194 1.83461 1.23912 0.92356 0.81031 0.70960 1.90657 1.67811 1.37288 1.46731 1.22440 0.86094 1.01612 1.02236 0.83170 1.23312 0.96319 0.94707 1.01065 1.22414 0.97574 0.89933 0.88232 0.87087 1.45619 1.16696 1.36386 1.36783 1.17622 0.81382 0.82254 0.80613 1.90742 1.48654 1.40474 1.67657 1.20307 0.98021 1.03938 1.04895 1.22474 0.99508 0.93279 0.91145 1.43804 1.11612 1.26690 1.27401 1.22423 1.00476 0.86410 0.97592 1.20179 0.88011 0.98189 1.02510 1.24311 1.05096 0.86163 0.99609 1.86370 1.63317 1.19558 1.67645 0.94911 0.75686 0.76931 0.81704 1.21639 0.98889 1.01354 0.99215 1.23446 0.97601 1.01082 0.94632 0.91958 0.91927 0.85475 0.88074 0.88246 0.74916 0.76992 0.90091 0.87690 0.88014 0.87755 0.73694 1.22890 1.24042 0.85541 0.89163 0.89067 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 113.37 1.20 1.17 16 2 O -0.36 -1.19 10.57 -51.45 -0.54 -1.74 16 3 C 0.47 1.84 7.49 71.23 0.53 2.38 16 4 O -0.54 -4.92 15.65 21.98 0.34 -4.57 16 5 C -0.10 0.15 4.26 -10.96 -0.05 0.10 16 6 H 0.15 -0.79 8.14 -2.39 -0.02 -0.81 16 7 C -0.12 0.25 7.15 31.12 0.22 0.47 16 8 C 0.12 0.11 4.21 45.52 0.19 0.30 16 9 H 0.11 0.44 7.50 -2.39 -0.02 0.43 16 10 N -0.70 -1.47 5.35 -443.45 -2.37 -3.84 16 11 C 0.59 6.40 7.81 86.62 0.68 7.08 16 12 O -0.59 -11.86 16.59 -4.11 -0.07 -11.93 16 13 C -0.26 -2.30 6.29 -19.04 -0.12 -2.42 16 14 C 0.07 0.05 10.83 83.91 0.91 0.96 16 15 N -0.42 -0.53 3.09 -533.25 -1.65 -2.17 16 16 C 0.07 -0.42 9.81 127.77 1.25 0.83 16 17 C 0.02 0.11 6.17 40.98 0.25 0.37 16 18 C -0.04 0.08 2.85 71.24 0.20 0.29 16 19 O -0.56 3.17 10.31 -148.98 -1.54 1.64 16 20 Si 0.80 -0.24 31.23 68.60 2.14 1.90 16 21 C -0.19 -2.12 9.49 23.62 0.22 -1.90 16 22 C -0.13 0.08 7.44 31.18 0.23 0.31 16 23 H 0.06 -0.04 8.13 -2.39 -0.02 -0.06 16 24 H 0.06 -0.03 8.13 -2.39 -0.02 -0.05 16 25 H 0.13 -0.79 8.14 -2.39 -0.02 -0.81 16 26 H 0.10 -0.15 7.40 -2.39 -0.02 -0.16 16 27 H 0.10 -0.38 8.14 -2.39 -0.02 -0.40 16 28 H 0.41 -1.74 7.65 -92.71 -0.71 -2.45 16 29 H 0.21 -1.85 7.45 -2.91 -0.02 -1.88 16 30 H 0.08 -0.47 8.14 -2.39 -0.02 -0.49 16 31 H 0.10 -1.14 8.13 -2.39 -0.02 -1.16 16 32 H 0.10 -0.67 6.74 -2.39 -0.02 -0.69 16 33 H 0.10 -0.67 7.96 -2.38 -0.02 -0.69 16 34 H 0.41 -6.54 8.74 -74.06 -0.65 -7.19 16 35 H -0.30 -2.29 6.89 99.48 0.69 -1.60 16 36 H -0.31 -2.98 7.11 99.48 0.71 -2.27 16 37 H 0.13 1.85 6.74 -2.91 -0.02 1.83 16 38 H 0.09 -0.03 8.14 -2.39 -0.02 -0.05 16 39 H 0.09 -0.04 8.10 -2.39 -0.02 -0.06 16 Total: 0.00 -31.14 334.55 1.80 -29.34 By element: Atomic # 1 Polarization: -18.32 SS G_CDS: -0.25 Total: -18.57 kcal Atomic # 6 Polarization: 4.21 SS G_CDS: 5.73 Total: 9.94 kcal Atomic # 7 Polarization: -2.00 SS G_CDS: -4.02 Total: -6.02 kcal Atomic # 8 Polarization: -14.80 SS G_CDS: -1.80 Total: -16.60 kcal Atomic # 14 Polarization: -0.24 SS G_CDS: 2.14 Total: 1.90 kcal Total: -31.14 1.80 -29.34 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10970304_13287730.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -43.384 kcal (2) G-P(sol) polarization free energy of solvation -31.141 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -74.525 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.797 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.344 kcal (6) G-S(sol) free energy of system = (1) + (5) -72.728 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.73 seconds