Wall clock time and date at job start Sat Mar 6 2021 15:35:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45203 * 1 3 3 C 1.34228 * 117.00149 * 2 1 4 4 O 1.20830 * 119.99570 * 359.97438 * 3 2 1 5 5 C 1.50694 * 120.00177 * 179.97438 * 3 2 1 6 6 H 1.09005 * 112.85054 * 48.79834 * 5 3 2 7 7 C 1.53783 * 113.61480 * 179.97438 * 5 3 2 8 8 C 1.53781 * 87.07895 * 139.98156 * 7 5 3 9 9 H 1.09001 * 113.61318 * 89.20623 * 8 7 5 10 10 N 1.46510 * 113.61053 * 220.01666 * 8 7 5 11 11 C 1.34775 * 119.99497 * 203.46857 * 10 8 7 12 12 O 1.21581 * 120.00525 * 0.02562 * 11 10 8 13 13 C 1.47609 * 119.99545 * 180.02562 * 11 10 8 14 14 C 1.39720 * 120.08578 * 0.02562 * 13 11 10 15 15 C 1.37720 * 119.90563 * 179.97438 * 14 13 11 16 16 C 1.50705 * 119.95114 * 179.97438 * 15 14 13 17 17 C 1.38970 * 120.09156 * 359.97438 * 15 14 13 18 18 O 1.35717 * 119.90963 * 179.97438 * 17 15 14 19 19 C 1.39017 * 120.17716 * 0.02562 * 17 15 14 20 20 C 1.50701 * 119.95543 * 180.02562 * 19 17 15 21 21 O 1.42905 * 109.46937 * 285.00025 * 20 19 17 22 22 Si 1.86301 * 109.47149 * 164.99954 * 20 19 17 23 23 C 1.37680 * 120.08608 * 0.27349 * 19 17 15 24 24 C 1.53778 * 87.17519 * 334.61044 * 8 7 5 25 25 H 1.09004 * 109.46837 * 180.02562 * 1 2 3 26 26 H 1.09005 * 109.47217 * 300.00431 * 1 2 3 27 27 H 1.08998 * 109.46965 * 60.00525 * 1 2 3 28 28 H 1.08993 * 113.61652 * 25.43089 * 7 5 3 29 29 H 1.09004 * 113.61117 * 254.53005 * 7 5 3 30 30 H 0.97001 * 119.99737 * 23.47277 * 10 8 7 31 31 H 1.07999 * 120.04459 * 0.02562 * 14 13 11 32 32 H 1.08990 * 109.47041 * 270.02019 * 16 15 14 33 33 H 1.08998 * 109.46960 * 30.02481 * 16 15 14 34 34 H 1.09009 * 109.47026 * 150.01522 * 16 15 14 35 35 H 0.96697 * 114.00031 * 270.02240 * 18 17 15 36 36 H 1.09001 * 109.46927 * 44.99769 * 20 19 17 37 37 H 0.96691 * 114.00079 * 59.99815 * 21 20 19 38 38 H 1.48493 * 109.99964 * 178.68005 * 22 20 19 39 39 H 1.48498 * 110.00005 * 299.99971 * 22 20 19 40 40 H 1.08001 * 120.04316 * 179.70410 * 23 19 17 41 41 H 1.08996 * 113.61822 * 139.94073 * 24 8 7 42 42 H 1.09000 * 113.61350 * 270.84503 * 24 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 -0.0005 5 6 3.5663 1.2748 0.0006 6 1 4.0240 0.6361 -0.7549 7 6 4.1078 2.7142 -0.0001 8 6 5.1806 2.2274 0.9882 9 1 6.0812 1.8498 0.5040 10 7 5.4692 3.1844 2.0593 11 6 6.6554 3.1435 2.6979 12 8 7.4861 2.3127 2.3849 13 6 6.9460 4.1073 3.7775 14 6 5.9925 5.0624 4.1390 15 6 6.2673 5.9596 5.1471 16 6 5.2398 6.9906 5.5376 17 6 7.4907 5.9154 5.8048 18 8 7.7579 6.8017 6.7974 19 6 8.4421 4.9666 5.4480 20 6 9.7669 4.9229 6.1649 21 8 10.5858 6.0058 5.7190 22 14 10.6190 3.3075 5.7970 23 6 8.1774 4.0702 4.4371 24 6 4.1926 1.1228 1.3987 25 1 -0.3633 -1.0277 0.0005 26 1 -0.3634 0.5139 0.8900 27 1 -0.3633 0.5137 -0.8900 28 1 3.4172 3.4407 0.4280 29 1 4.5112 3.0284 -0.9628 30 1 4.8066 3.8474 2.3088 31 1 5.0410 5.0966 3.6292 32 1 5.3857 7.8922 4.9428 33 1 4.2406 6.5941 5.3574 34 1 5.3500 7.2311 6.5951 35 1 8.1736 7.6198 6.4927 36 1 9.6019 5.0103 7.2388 37 1 10.2036 6.8795 5.8787 38 1 11.9408 3.2652 6.4724 39 1 9.7775 2.1733 6.2560 40 1 8.9188 3.3364 4.1572 41 1 4.6644 0.1542 1.5639 42 1 3.5252 1.4134 2.2100 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10970304_13287732.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:35:19 Heat of formation + Delta-G solvation = -142.908608 kcal Electronic energy + Delta-G solvation = -26859.370462 eV Core-core repulsion = 22772.245952 eV Total energy + Delta-G solvation = -4087.124511 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 322.134 amu Computer time = 0.74 seconds Orbital eigenvalues (eV) -42.07601 -41.65501 -40.61783 -39.20646 -37.76991 -37.66509 -37.32750 -34.78450 -34.04709 -31.87028 -29.41198 -28.16901 -27.23442 -26.97455 -26.72264 -24.76997 -22.56887 -22.14672 -21.60343 -20.71628 -19.62138 -19.00146 -18.82608 -18.10428 -17.98097 -17.53308 -17.38036 -16.89421 -16.46772 -16.26257 -16.09101 -15.91491 -15.33200 -15.09339 -14.71361 -14.55365 -14.43126 -14.26632 -14.02618 -13.92080 -13.75151 -13.62263 -13.46624 -13.10421 -13.08802 -12.82589 -12.61801 -12.39672 -12.30722 -11.95724 -11.90647 -11.81836 -11.40289 -11.31389 -11.22252 -10.95013 -10.22635 -10.02348 -9.75754 -4.82123 -0.47910 0.01716 1.11335 1.37424 1.56364 1.59652 1.72446 2.01083 2.06691 2.49827 2.91224 3.12442 3.19601 3.34207 3.46740 3.52209 3.57582 3.64173 3.74752 3.89112 3.93395 4.07218 4.13123 4.20228 4.21263 4.30754 4.39023 4.42994 4.45610 4.49726 4.53365 4.56064 4.58085 4.68780 4.76423 4.91870 4.94503 5.02005 5.05052 5.17426 5.32216 5.36877 5.45183 6.29671 6.34261 6.45518 6.69243 7.08751 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.356 6.356 3 C 0.472 3.528 4 O -0.506 6.506 5 C -0.109 4.109 6 H 0.133 0.867 7 C -0.127 4.127 8 C 0.126 3.874 9 H 0.127 0.873 10 N -0.716 5.716 11 C 0.563 3.437 12 O -0.527 6.527 13 C -0.136 4.136 14 C -0.068 4.068 15 C -0.112 4.112 16 C -0.115 4.115 17 C 0.142 3.858 18 O -0.491 6.491 19 C -0.142 4.142 20 C -0.075 4.075 21 O -0.530 6.530 22 Si 0.740 3.260 23 C -0.039 4.039 24 C -0.134 4.134 25 H 0.103 0.897 26 H 0.063 0.937 27 H 0.064 0.936 28 H 0.102 0.898 29 H 0.090 0.910 30 H 0.402 0.598 31 H 0.133 0.867 32 H 0.074 0.926 33 H 0.071 0.929 34 H 0.077 0.923 35 H 0.394 0.606 36 H 0.081 0.919 37 H 0.359 0.641 38 H -0.252 1.252 39 H -0.249 1.249 40 H 0.148 0.852 41 H 0.091 0.909 42 H 0.091 0.909 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.873 2.005 -1.587 3.846 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.272 6.272 3 C 0.315 3.685 4 O -0.393 6.393 5 C -0.129 4.129 6 H 0.151 0.849 7 C -0.165 4.165 8 C 0.021 3.979 9 H 0.145 0.855 10 N -0.368 5.368 11 C 0.351 3.649 12 O -0.404 6.404 13 C -0.139 4.139 14 C -0.087 4.087 15 C -0.113 4.113 16 C -0.172 4.172 17 C 0.097 3.903 18 O -0.302 6.302 19 C -0.143 4.143 20 C -0.184 4.184 21 O -0.334 6.334 22 Si 0.638 3.362 23 C -0.057 4.057 24 C -0.173 4.173 25 H 0.122 0.878 26 H 0.082 0.918 27 H 0.083 0.917 28 H 0.121 0.879 29 H 0.109 0.891 30 H 0.238 0.762 31 H 0.151 0.849 32 H 0.093 0.907 33 H 0.090 0.910 34 H 0.096 0.904 35 H 0.252 0.748 36 H 0.099 0.901 37 H 0.206 0.794 38 H -0.176 1.176 39 H -0.173 1.173 40 H 0.165 0.835 41 H 0.110 0.890 42 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges -2.029 0.055 -1.289 2.404 hybrid contribution -1.428 1.873 0.904 2.523 sum -3.457 1.928 -0.385 3.977 Atomic orbital electron populations 1.23330 0.75901 1.04056 1.02692 1.86523 1.23742 1.33252 1.83728 1.23475 0.91581 0.81433 0.72026 1.90682 1.66996 1.36449 1.45179 1.22343 0.87703 1.00979 1.01851 0.84942 1.23378 0.97088 0.94969 1.01019 1.22478 0.97980 0.89471 0.87941 0.85505 1.45851 1.17495 1.36179 1.37242 1.18147 0.81720 0.83578 0.81445 1.90816 1.46452 1.37707 1.65379 1.19850 0.95919 0.98677 0.99447 1.21115 0.98532 0.93209 0.95832 1.20175 0.95998 0.99004 0.96121 1.20748 0.96685 0.96835 1.02918 1.18341 0.92025 0.91794 0.88123 1.84745 1.82920 1.30760 1.31771 1.20589 0.97021 0.98373 0.98339 1.25417 0.91665 1.02201 0.99089 1.86841 1.45801 1.15948 1.84841 0.92724 0.79534 0.72172 0.91776 1.20938 0.95645 0.96640 0.92512 1.23493 0.97950 1.01304 0.94562 0.87813 0.91790 0.91698 0.87915 0.89101 0.76179 0.84913 0.90720 0.90968 0.90434 0.74829 0.90134 0.79428 1.17617 1.17275 0.83536 0.88991 0.89041 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 101.05 1.07 1.03 16 2 O -0.36 -0.35 10.57 -39.25 -0.41 -0.76 16 3 C 0.47 0.51 7.49 36.00 0.27 0.78 16 4 O -0.51 -1.87 15.65 -18.75 -0.29 -2.16 16 5 C -0.11 0.20 4.26 -90.87 -0.39 -0.19 16 6 H 0.13 -0.47 8.14 -51.93 -0.42 -0.89 16 7 C -0.13 0.30 7.16 -25.92 -0.19 0.11 16 8 C 0.13 -0.22 4.21 -67.11 -0.28 -0.50 16 9 H 0.13 -0.13 7.50 -51.93 -0.39 -0.52 16 10 N -0.72 1.00 5.31 -54.03 -0.29 0.71 16 11 C 0.56 0.79 7.76 -12.44 -0.10 0.69 16 12 O -0.53 -2.42 15.96 5.29 0.08 -2.34 16 13 C -0.14 -0.09 5.88 -104.96 -0.62 -0.70 16 14 C -0.07 0.09 9.18 -39.22 -0.36 -0.27 16 15 C -0.11 0.10 5.89 -104.54 -0.62 -0.52 16 16 C -0.12 0.29 9.78 36.01 0.35 0.65 16 17 C 0.14 -0.02 6.62 -39.02 -0.26 -0.28 16 18 O -0.49 0.72 11.52 -18.86 -0.22 0.51 16 19 C -0.14 -0.11 5.27 -104.54 -0.55 -0.66 16 20 C -0.08 -0.06 2.33 36.01 0.08 0.02 16 21 O -0.53 -0.26 12.65 -35.23 -0.45 -0.71 16 22 Si 0.74 0.86 30.17 -169.99 -5.13 -4.27 16 23 C -0.04 -0.05 8.20 -39.22 -0.32 -0.37 16 24 C -0.13 0.25 7.44 -25.83 -0.19 0.06 16 25 H 0.10 -0.33 8.14 -51.93 -0.42 -0.75 16 26 H 0.06 -0.06 8.13 -51.93 -0.42 -0.48 16 27 H 0.06 -0.06 8.13 -51.93 -0.42 -0.48 16 28 H 0.10 -0.18 7.40 -51.93 -0.38 -0.57 16 29 H 0.09 -0.28 8.14 -51.93 -0.42 -0.71 16 30 H 0.40 -1.44 6.73 -40.82 -0.27 -1.71 16 31 H 0.13 -0.53 6.39 -52.49 -0.34 -0.87 16 32 H 0.07 -0.26 8.14 -51.93 -0.42 -0.68 16 33 H 0.07 -0.23 8.08 -51.93 -0.42 -0.65 16 34 H 0.08 -0.14 7.52 -51.92 -0.39 -0.53 16 35 H 0.39 -2.39 8.56 45.56 0.39 -2.00 16 36 H 0.08 0.08 7.82 -51.93 -0.41 -0.33 16 37 H 0.36 -1.14 8.19 45.56 0.37 -0.77 16 38 H -0.25 -0.90 7.11 56.52 0.40 -0.50 16 39 H -0.25 -0.73 7.11 56.52 0.40 -0.32 16 40 H 0.15 0.15 4.71 -52.49 -0.25 -0.09 16 41 H 0.09 -0.18 8.14 -51.93 -0.42 -0.60 16 42 H 0.09 -0.14 8.10 -51.93 -0.42 -0.56 16 LS Contribution 356.04 15.07 5.37 5.37 Total: 0.00 -9.74 356.04 -8.09 -17.83 By element: Atomic # 1 Polarization: -9.36 SS G_CDS: -4.66 Total: -14.02 kcal Atomic # 6 Polarization: 1.95 SS G_CDS: -2.09 Total: -0.14 kcal Atomic # 7 Polarization: 1.00 SS G_CDS: -0.29 Total: 0.71 kcal Atomic # 8 Polarization: -4.18 SS G_CDS: -1.29 Total: -5.47 kcal Atomic # 14 Polarization: 0.86 SS G_CDS: -5.13 Total: -4.27 kcal Total LS contribution 5.37 Total: 5.37 kcal Total: -9.74 -8.09 -17.83 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10970304_13287732.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -125.079 kcal (2) G-P(sol) polarization free energy of solvation -9.737 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -134.816 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.093 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.829 kcal (6) G-S(sol) free energy of system = (1) + (5) -142.909 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.74 seconds