Wall clock time and date at job start Sat Mar 6 2021 15:35:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45195 * 1 3 3 C 1.34226 * 117.00214 * 2 1 4 4 O 1.20826 * 120.00396 * 359.97438 * 3 2 1 5 5 C 1.50703 * 120.00309 * 180.02562 * 3 2 1 6 6 H 1.09000 * 112.84719 * 311.19129 * 5 3 2 7 7 C 1.53957 * 113.74384 * 82.39440 * 5 3 2 8 8 C 1.53789 * 87.01774 * 139.94621 * 7 5 3 9 9 H 1.09002 * 113.61152 * 89.23142 * 8 7 5 10 10 N 1.46496 * 113.61422 * 220.04912 * 8 7 5 11 11 C 1.34774 * 120.00201 * 254.13489 * 10 8 7 12 12 O 1.21291 * 119.99770 * 0.02562 * 11 10 8 13 13 C 1.50694 * 120.00406 * 180.02562 * 11 10 8 14 14 C 1.50699 * 109.47347 * 180.02562 * 13 11 10 15 15 C 1.38278 * 119.93233 * 269.72258 * 14 13 11 16 16 C 1.38127 * 120.06150 * 179.72077 * 15 14 13 17 17 C 1.38826 * 119.93351 * 0.55866 * 16 15 14 18 18 N 1.40199 * 120.06219 * 179.74518 * 17 16 15 19 19 C 1.36576 * 125.66617 * 236.04923 * 18 17 16 20 20 C 1.34847 * 108.19676 * 179.83377 * 19 18 17 21 21 C 1.40938 * 107.47030 * 0.42318 * 20 19 18 22 22 C 1.34849 * 107.46895 * 359.73647 * 21 20 19 23 23 C 1.50696 * 125.90265 * 179.97438 * 22 21 20 24 24 O 1.42898 * 109.47424 * 218.21083 * 23 22 21 25 25 Si 1.86298 * 109.47054 * 338.20920 * 23 22 21 26 26 C 1.38823 * 119.87040 * 359.72156 * 17 16 15 27 27 C 1.38125 * 119.93549 * 359.97438 * 26 17 16 28 28 C 1.53779 * 113.61667 * 179.97438 * 5 3 2 29 29 H 1.09004 * 109.46961 * 60.00074 * 1 2 3 30 30 H 1.08999 * 109.47353 * 180.02562 * 1 2 3 31 31 H 1.09001 * 109.47074 * 300.00456 * 1 2 3 32 32 H 1.09001 * 113.61027 * 25.43187 * 7 5 3 33 33 H 1.08998 * 113.66761 * 254.47522 * 7 5 3 34 34 H 0.97007 * 119.99862 * 74.14153 * 10 8 7 35 35 H 1.09003 * 109.47011 * 59.99962 * 13 11 10 36 36 H 1.09007 * 109.47128 * 300.00698 * 13 11 10 37 37 H 1.07998 * 119.96610 * 359.97438 * 15 14 13 38 38 H 1.08001 * 120.02932 * 180.25267 * 16 15 14 39 39 H 1.07997 * 125.89792 * 0.02562 * 19 18 17 40 40 H 1.08002 * 126.26354 * 180.13158 * 20 19 18 41 41 H 1.07998 * 126.26467 * 179.75819 * 21 20 19 42 42 H 1.09004 * 109.46984 * 98.20478 * 23 22 21 43 43 H 0.96695 * 114.00448 * 65.22421 * 24 23 22 44 44 H 1.48502 * 110.00100 * 58.68128 * 25 23 22 45 45 H 1.48503 * 110.00463 * 179.97438 * 25 23 22 46 46 H 1.08002 * 120.03164 * 179.97438 * 26 17 16 47 47 H 1.07998 * 119.96590 * 179.97438 * 27 26 17 48 48 H 1.09004 * 113.61577 * 105.38642 * 28 5 3 49 49 H 1.08993 * 113.69091 * 334.49137 * 28 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4519 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4034 2.2093 -0.0005 5 6 3.5663 1.2748 -0.0006 6 1 4.0239 0.6362 0.7550 7 6 4.1946 1.1213 -1.3977 8 6 5.1821 2.2264 -0.9869 9 1 6.0820 1.8492 -0.5010 10 7 5.4722 3.1822 -2.0586 11 6 6.6593 3.1407 -2.6954 12 8 7.4872 2.3117 -2.3816 13 6 6.9580 4.1242 -3.7974 14 6 8.3398 3.8657 -4.3405 15 6 9.4301 4.5132 -3.7892 16 6 10.6984 4.2739 -4.2811 17 6 10.8765 3.3912 -5.3377 18 7 12.1621 3.1504 -5.8426 19 6 12.5507 3.3131 -7.1418 20 6 13.8557 2.9865 -7.2350 21 6 14.2876 2.5990 -5.9506 22 6 13.2323 2.7086 -5.1184 23 6 13.2333 2.3969 -3.6440 24 8 11.9972 1.7749 -3.2877 25 14 14.6437 1.2437 -3.2542 26 6 9.7792 2.7471 -5.8930 27 6 8.5140 2.9856 -5.3927 28 6 4.1078 2.7142 -0.0011 29 1 -0.3633 0.5138 -0.8900 30 1 -0.3634 -1.0276 0.0005 31 1 -0.3633 0.5139 0.8900 32 1 3.5283 1.4112 -2.2102 33 1 4.6667 0.1525 -1.5611 34 1 4.8100 3.8450 -2.3097 35 1 6.9063 5.1389 -3.4026 36 1 6.2260 4.0077 -4.5967 37 1 9.2903 5.2034 -2.9704 38 1 11.5501 4.7768 -3.8474 39 1 11.9223 3.6486 -7.9535 40 1 14.4583 3.0121 -8.1309 41 1 15.2820 2.2741 -5.6820 42 1 13.3520 3.3205 -3.0775 43 1 11.8617 0.9078 -3.6936 44 1 15.9327 1.8660 -3.6495 45 1 14.6562 0.9289 -1.8030 46 1 9.9147 2.0603 -6.7154 47 1 7.6600 2.4851 -5.8246 48 1 4.5099 3.0298 0.9616 49 1 3.4187 3.4411 -0.4309 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10970304_13287746.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:35:21 Heat of formation + Delta-G solvation = -34.024348 kcal Electronic energy + Delta-G solvation = -32625.451746 eV Core-core repulsion = 28100.551433 eV Total energy + Delta-G solvation = -4524.900313 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 371.161 amu Computer time = 1.34 seconds Orbital eigenvalues (eV) -42.67945 -41.99087 -41.01955 -39.91585 -38.94128 -37.70427 -37.44011 -34.84871 -34.49792 -32.13990 -31.79296 -31.04913 -29.43729 -28.05905 -26.82789 -26.51354 -26.05001 -23.95102 -23.59310 -22.38765 -21.54624 -21.43827 -20.69530 -20.54771 -19.24771 -18.98101 -18.07723 -17.97734 -17.47001 -17.42960 -17.05934 -16.92366 -16.34525 -16.19049 -15.97359 -15.79485 -15.69207 -15.37216 -14.94618 -14.71627 -14.51508 -14.46227 -14.36334 -14.27090 -14.20475 -13.93325 -13.64656 -13.53530 -13.37627 -13.24346 -13.05687 -12.87546 -12.69620 -12.41535 -12.32738 -12.17162 -12.03257 -11.94349 -11.86338 -11.79466 -11.43394 -10.96516 -10.73980 -10.22856 -10.06936 -9.98040 -9.22586 -9.08725 -4.98652 0.02497 0.36096 1.04624 1.07319 1.32955 1.62656 1.64102 1.66714 1.84611 1.97357 2.09537 2.23513 2.74303 3.24758 3.32969 3.38990 3.63042 3.66493 3.68089 3.75337 3.77325 3.89575 3.96198 4.08198 4.14778 4.24881 4.25213 4.27699 4.33630 4.39546 4.49674 4.51760 4.53602 4.58665 4.62256 4.64419 4.64945 4.67942 4.83229 4.84909 4.92088 4.97585 5.12277 5.20197 5.22326 5.23943 5.32199 5.36595 5.51479 5.52949 5.80721 5.93410 6.17929 6.50809 6.55714 6.61334 6.63708 7.27791 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.365 6.365 3 C 0.472 3.528 4 O -0.536 6.536 5 C -0.108 4.108 6 H 0.148 0.852 7 C -0.128 4.128 8 C 0.127 3.873 9 H 0.110 0.890 10 N -0.711 5.711 11 C 0.515 3.485 12 O -0.572 6.572 13 C -0.100 4.100 14 C -0.066 4.066 15 C -0.099 4.099 16 C -0.110 4.110 17 C 0.118 3.882 18 N -0.395 5.395 19 C -0.014 4.014 20 C -0.200 4.200 21 C -0.203 4.203 22 C -0.020 4.020 23 C -0.056 4.056 24 O -0.548 6.548 25 Si 0.806 3.194 26 C -0.119 4.119 27 C -0.095 4.095 28 C -0.119 4.119 29 H 0.062 0.938 30 H 0.127 0.873 31 H 0.061 0.939 32 H 0.092 0.908 33 H 0.089 0.911 34 H 0.417 0.583 35 H 0.130 0.870 36 H 0.134 0.866 37 H 0.136 0.864 38 H 0.111 0.889 39 H 0.180 0.820 40 H 0.156 0.844 41 H 0.150 0.850 42 H 0.099 0.901 43 H 0.387 0.613 44 H -0.277 1.277 45 H -0.292 1.292 46 H 0.136 0.864 47 H 0.147 0.853 48 H 0.095 0.905 49 H 0.100 0.900 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.459 -1.047 -2.291 5.121 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.281 6.281 3 C 0.316 3.684 4 O -0.426 6.426 5 C -0.127 4.127 6 H 0.165 0.835 7 C -0.166 4.166 8 C 0.021 3.979 9 H 0.128 0.872 10 N -0.363 5.363 11 C 0.302 3.698 12 O -0.450 6.450 13 C -0.139 4.139 14 C -0.066 4.066 15 C -0.118 4.118 16 C -0.130 4.130 17 C 0.029 3.971 18 N -0.068 5.068 19 C -0.142 4.142 20 C -0.224 4.224 21 C -0.228 4.228 22 C -0.130 4.130 23 C -0.166 4.166 24 O -0.354 6.354 25 Si 0.709 3.291 26 C -0.138 4.138 27 C -0.113 4.113 28 C -0.157 4.157 29 H 0.081 0.919 30 H 0.145 0.855 31 H 0.080 0.920 32 H 0.110 0.890 33 H 0.108 0.892 34 H 0.254 0.746 35 H 0.148 0.852 36 H 0.152 0.848 37 H 0.154 0.846 38 H 0.129 0.871 39 H 0.197 0.803 40 H 0.173 0.827 41 H 0.168 0.832 42 H 0.116 0.884 43 H 0.235 0.765 44 H -0.204 1.204 45 H -0.220 1.220 46 H 0.154 0.846 47 H 0.165 0.835 48 H 0.114 0.886 49 H 0.118 0.882 Dipole moment (debyes) X Y Z Total from point charges -3.753 -0.848 -1.164 4.020 hybrid contribution -0.657 1.019 0.010 1.213 sum -4.410 0.171 -1.154 4.562 Atomic orbital electron populations 1.23529 0.75016 1.05597 1.02486 1.86523 1.24797 1.33268 1.83471 1.23977 0.92469 0.80994 0.70948 1.90663 1.67868 1.37303 1.46749 1.22474 0.85946 1.01758 1.02553 0.83458 1.23440 0.97652 1.01188 0.94365 1.22307 0.97243 0.89916 0.88411 0.87171 1.45891 1.17487 1.36239 1.36725 1.20989 0.81179 0.84642 0.82944 1.90772 1.47837 1.39802 1.66581 1.20776 0.94858 1.00478 0.97786 1.19559 0.94843 0.96610 0.95610 1.21024 0.91346 1.00091 0.99295 1.20930 0.97931 0.97448 0.96643 1.17724 0.83131 0.98757 0.97505 1.41563 1.06990 1.50134 1.08135 1.22363 0.97287 1.08595 0.85933 1.21182 0.94842 1.07867 0.98525 1.20977 0.98588 1.09513 0.93709 1.21226 0.88044 1.08553 0.95193 1.25017 0.98180 1.03614 0.89744 1.86536 1.37921 1.37865 1.73042 0.93024 0.72515 0.85218 0.78364 1.21151 0.91728 0.99532 1.01391 1.21110 0.97024 0.97028 0.96132 1.23308 0.96619 0.94557 1.01190 0.91930 0.85460 0.92018 0.88997 0.89191 0.74573 0.85226 0.84761 0.84583 0.87081 0.80260 0.82677 0.83207 0.88369 0.76453 1.20359 1.21985 0.84573 0.83496 0.88607 0.88188 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.05 10.56 113.37 1.20 1.15 16 2 O -0.36 -0.77 10.56 -51.38 -0.54 -1.32 16 3 C 0.47 1.20 7.49 71.24 0.53 1.74 16 4 O -0.54 -4.34 15.65 21.97 0.34 -4.00 16 5 C -0.11 0.37 4.26 -10.95 -0.05 0.32 16 6 H 0.15 -1.00 8.14 -2.39 -0.02 -1.02 16 7 C -0.13 0.50 7.45 31.18 0.23 0.74 16 8 C 0.13 -0.44 4.21 45.51 0.19 -0.25 16 9 H 0.11 -0.03 7.50 -2.39 -0.02 -0.04 16 10 N -0.71 3.54 5.36 -440.08 -2.36 1.18 16 11 C 0.51 -0.08 7.82 87.66 0.69 0.61 16 12 O -0.57 -5.63 15.65 -3.06 -0.05 -5.68 16 13 C -0.10 0.59 5.83 29.10 0.17 0.76 16 14 C -0.07 -0.04 4.37 -19.85 -0.09 -0.13 16 15 C -0.10 -0.33 9.69 22.25 0.22 -0.12 16 16 C -0.11 -0.71 8.61 22.38 0.19 -0.51 16 17 C 0.12 0.70 4.67 38.08 0.18 0.87 16 18 N -0.40 -2.49 2.84 -333.42 -0.95 -3.44 16 19 C -0.01 -0.06 11.21 83.18 0.93 0.87 16 20 C -0.20 -0.87 10.86 22.15 0.24 -0.63 16 21 C -0.20 -1.06 9.39 22.15 0.21 -0.85 16 22 C -0.02 -0.12 6.12 41.04 0.25 0.13 16 23 C -0.06 -0.25 2.49 71.23 0.18 -0.08 16 24 O -0.55 -3.31 11.01 -148.98 -1.64 -4.95 16 25 Si 0.81 0.71 30.94 68.60 2.12 2.83 16 26 C -0.12 -0.34 9.77 22.38 0.22 -0.13 16 27 C -0.09 -0.07 9.69 22.25 0.22 0.15 16 28 C -0.12 0.55 7.15 31.11 0.22 0.77 16 29 H 0.06 -0.10 8.13 -2.39 -0.02 -0.12 16 30 H 0.13 -0.91 8.14 -2.39 -0.02 -0.92 16 31 H 0.06 -0.08 8.13 -2.39 -0.02 -0.10 16 32 H 0.09 -0.36 8.10 -2.39 -0.02 -0.38 16 33 H 0.09 -0.33 8.14 -2.39 -0.02 -0.35 16 34 H 0.42 -4.36 8.71 -92.70 -0.81 -5.16 16 35 H 0.13 -1.35 8.08 -2.39 -0.02 -1.37 16 36 H 0.13 -1.53 8.08 -2.38 -0.02 -1.55 16 37 H 0.14 0.02 8.06 -2.91 -0.02 0.00 16 38 H 0.11 0.82 8.06 -2.91 -0.02 0.80 16 39 H 0.18 -0.04 8.06 -2.91 -0.02 -0.07 16 40 H 0.16 0.09 8.06 -2.91 -0.02 0.07 16 41 H 0.15 0.40 6.43 -2.91 -0.02 0.38 16 42 H 0.10 0.59 7.96 -2.38 -0.02 0.57 16 43 H 0.39 0.01 8.60 -74.06 -0.64 -0.62 16 44 H -0.28 -1.28 6.86 99.48 0.68 -0.60 16 45 H -0.29 -2.08 7.11 99.48 0.71 -1.38 16 46 H 0.14 0.06 8.06 -2.91 -0.02 0.04 16 47 H 0.15 -0.57 8.06 -2.91 -0.02 -0.59 16 48 H 0.10 -0.55 8.14 -2.38 -0.02 -0.57 16 49 H 0.10 -0.35 7.41 -2.39 -0.02 -0.37 16 Total: 0.00 -25.73 415.70 2.42 -23.32 By element: Atomic # 1 Polarization: -12.91 SS G_CDS: -0.44 Total: -13.35 kcal Atomic # 6 Polarization: -0.53 SS G_CDS: 5.93 Total: 5.40 kcal Atomic # 7 Polarization: 1.05 SS G_CDS: -3.30 Total: -2.25 kcal Atomic # 8 Polarization: -14.06 SS G_CDS: -1.89 Total: -15.94 kcal Atomic # 14 Polarization: 0.71 SS G_CDS: 2.12 Total: 2.83 kcal Total: -25.73 2.42 -23.32 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10970304_13287746.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -10.709 kcal (2) G-P(sol) polarization free energy of solvation -25.731 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -36.440 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.416 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.315 kcal (6) G-S(sol) free energy of system = (1) + (5) -34.024 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.34 seconds