Wall clock time and date at job start Sat Mar 6 2021 15:35:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45192 * 1 3 3 C 1.34233 * 117.00369 * 2 1 4 4 O 1.20822 * 119.99583 * 359.97438 * 3 2 1 5 5 C 1.50700 * 120.00053 * 179.97438 * 3 2 1 6 6 H 1.08993 * 112.91004 * 311.24954 * 5 3 2 7 7 C 1.53962 * 113.66521 * 82.55365 * 5 3 2 8 8 C 1.53782 * 87.11063 * 139.88647 * 7 5 3 9 9 H 1.08997 * 113.61225 * 89.18406 * 8 7 5 10 10 N 1.46506 * 113.68817 * 220.07794 * 8 7 5 11 11 C 1.34776 * 119.99831 * 252.53351 * 10 8 7 12 12 O 1.21554 * 119.99904 * 0.02562 * 11 10 8 13 13 C 1.47836 * 119.99948 * 180.02562 * 11 10 8 14 14 C 1.39519 * 120.55808 * 359.97438 * 13 11 10 15 15 N 1.31693 * 120.56736 * 179.97438 * 14 13 11 16 16 C 1.31933 * 121.88071 * 0.02562 * 15 14 13 17 17 C 1.38354 * 121.07578 * 359.97438 * 16 15 14 18 18 C 1.50705 * 120.34773 * 180.02562 * 17 16 15 19 19 O 1.42897 * 109.47129 * 120.00246 * 18 17 16 20 20 Si 1.86293 * 109.46873 * 0.02562 * 18 17 16 21 21 C 1.38363 * 119.30584 * 359.72811 * 17 16 15 22 22 C 1.53781 * 87.08260 * 334.63747 * 8 7 5 23 23 H 1.09004 * 109.47129 * 179.97438 * 1 2 3 24 24 H 1.09001 * 109.47107 * 300.00189 * 1 2 3 25 25 H 1.09006 * 109.46965 * 60.00398 * 1 2 3 26 26 H 1.08997 * 113.53543 * 25.33321 * 7 5 3 27 27 H 1.08994 * 113.66446 * 254.45524 * 7 5 3 28 28 H 0.96990 * 119.99883 * 72.53908 * 10 8 7 29 29 H 1.08000 * 119.71596 * 0.02678 * 14 13 11 30 30 H 1.07992 * 119.46157 * 180.02562 * 16 15 14 31 31 H 1.08996 * 109.47070 * 240.00235 * 18 17 16 32 32 H 0.96697 * 113.99864 * 179.97438 * 19 18 17 33 33 H 1.48502 * 110.00448 * 298.68090 * 20 18 17 34 34 H 1.48503 * 110.00198 * 60.00274 * 20 18 17 35 35 H 1.07995 * 120.85682 * 180.29739 * 21 17 16 36 36 H 1.09002 * 113.61445 * 139.98212 * 22 8 7 37 37 H 1.09002 * 113.61408 * 270.79943 * 22 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4519 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 -0.0005 5 6 3.5663 1.2748 0.0006 6 1 4.0244 0.6361 0.7557 7 6 4.1936 1.1243 -1.3974 8 6 5.1817 2.2291 -0.9876 9 1 6.0822 1.8517 -0.5030 10 7 5.4703 3.1872 -2.0577 11 6 6.6685 3.1678 -2.6745 12 8 7.5095 2.3550 -2.3432 13 6 6.9600 4.1349 -3.7539 14 6 6.0031 5.0724 -4.1438 15 7 6.2627 5.9344 -5.1050 16 6 7.4228 5.9490 -5.7333 17 6 8.4238 5.0519 -5.4055 18 6 9.7429 5.0835 -6.1335 19 8 10.7962 5.3320 -5.2003 20 14 9.7142 6.4383 -7.4119 21 6 8.2033 4.1295 -4.3980 22 6 4.1078 2.7142 0.0005 23 1 -0.3633 -1.0277 -0.0005 24 1 -0.3633 0.5139 0.8900 25 1 -0.3633 0.5138 -0.8901 26 1 3.5253 1.4149 -2.2079 27 1 4.6656 0.1559 -1.5632 28 1 4.7992 3.8355 -2.3221 29 1 5.0415 5.0920 -3.6525 30 1 7.5940 6.6734 -6.5156 31 1 9.9105 4.1245 -6.6236 32 1 11.6760 5.3654 -5.6000 33 1 8.6435 6.1754 -8.4068 34 1 9.4867 7.7510 -6.7559 35 1 8.9689 3.4210 -4.1185 36 1 4.5105 3.0293 0.9631 37 1 3.4169 3.4406 -0.4275 There are 53 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 53 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10970304_13287814.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:35:25 Heat of formation + Delta-G solvation = -81.218445 kcal Electronic energy + Delta-G solvation = -22614.846470 eV Core-core repulsion = 18939.190946 eV Total energy + Delta-G solvation = -3675.655524 eV No. of doubly occupied orbitals = 53 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 293.114 amu Computer time = 0.73 seconds Orbital eigenvalues (eV) -42.20052 -41.79693 -40.60061 -39.14222 -37.86418 -37.46338 -34.99252 -33.97167 -33.08752 -29.43854 -27.40487 -27.26878 -26.85861 -25.56287 -23.86265 -22.57288 -21.74199 -20.74393 -19.11319 -19.02336 -18.53876 -18.28040 -18.06103 -17.65826 -17.44033 -16.67794 -16.37979 -16.13883 -15.99194 -15.40271 -15.22979 -14.87656 -14.50162 -14.44208 -14.29428 -14.28397 -13.83433 -13.66603 -13.55167 -13.04222 -12.67189 -12.58444 -12.36720 -12.17467 -11.87610 -11.84929 -11.54035 -11.42896 -11.20215 -10.84659 -10.64475 -10.26784 -10.16655 -4.97390 -0.74664 -0.15054 1.03434 1.22496 1.51107 1.59640 1.63913 1.91420 1.98688 2.46638 2.91199 3.16972 3.20616 3.28001 3.39859 3.56700 3.58483 3.61345 3.69633 3.74186 3.97842 4.02689 4.13917 4.23994 4.26590 4.44097 4.46162 4.54119 4.59840 4.66730 4.70335 4.77300 4.80552 4.89982 4.99110 5.15972 5.30458 5.37923 6.25444 6.46192 6.62405 6.85474 6.92210 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.364 6.364 3 C 0.471 3.529 4 O -0.537 6.537 5 C -0.105 4.105 6 H 0.153 0.847 7 C -0.129 4.129 8 C 0.124 3.876 9 H 0.122 0.878 10 N -0.700 5.700 11 C 0.571 3.429 12 O -0.563 6.563 13 C -0.192 4.192 14 C 0.141 3.859 15 N -0.498 5.498 16 C 0.108 3.892 17 C -0.141 4.141 18 C -0.079 4.079 19 O -0.564 6.564 20 Si 0.780 3.220 21 C 0.004 3.996 22 C -0.120 4.120 23 H 0.127 0.873 24 H 0.061 0.939 25 H 0.061 0.939 26 H 0.090 0.910 27 H 0.095 0.905 28 H 0.414 0.586 29 H 0.194 0.806 30 H 0.157 0.843 31 H 0.103 0.897 32 H 0.408 0.592 33 H -0.280 1.280 34 H -0.291 1.291 35 H 0.150 0.850 36 H 0.101 0.899 37 H 0.099 0.901 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.711 -1.751 -2.230 3.311 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.279 6.279 3 C 0.316 3.684 4 O -0.426 6.426 5 C -0.124 4.124 6 H 0.171 0.829 7 C -0.168 4.168 8 C 0.020 3.980 9 H 0.140 0.860 10 N -0.351 5.351 11 C 0.358 3.642 12 O -0.443 6.443 13 C -0.197 4.197 14 C -0.017 4.017 15 N -0.206 5.206 16 C -0.047 4.047 17 C -0.143 4.143 18 C -0.189 4.189 19 O -0.375 6.375 20 Si 0.684 3.316 21 C -0.022 4.022 22 C -0.158 4.158 23 H 0.145 0.855 24 H 0.080 0.920 25 H 0.080 0.920 26 H 0.109 0.891 27 H 0.114 0.886 28 H 0.253 0.747 29 H 0.211 0.789 30 H 0.174 0.826 31 H 0.120 0.880 32 H 0.260 0.740 33 H -0.207 1.207 34 H -0.219 1.219 35 H 0.168 0.832 36 H 0.119 0.881 37 H 0.117 0.883 Dipole moment (debyes) X Y Z Total from point charges 0.463 -0.800 -2.180 2.368 hybrid contribution -0.427 -0.529 0.510 0.850 sum 0.035 -1.329 -1.670 2.135 Atomic orbital electron populations 1.23525 0.75053 1.05584 1.02457 1.86522 1.24745 1.33219 1.83463 1.23978 0.92497 0.81002 0.70964 1.90669 1.67878 1.37353 1.46727 1.22453 0.85936 1.01621 1.02427 0.82900 1.23461 0.97532 1.01203 0.94571 1.22517 0.98028 0.89583 0.87896 0.86025 1.45770 1.15347 1.36984 1.37046 1.18042 0.82241 0.82697 0.81218 1.90796 1.47577 1.40158 1.65742 1.21087 0.97170 1.00669 1.00823 1.23469 0.99208 0.87841 0.91193 1.67724 1.21006 1.23464 1.08357 1.22880 0.89140 0.95499 0.97213 1.20730 0.97310 0.97183 0.99086 1.24817 0.85197 1.10931 0.97941 1.86433 1.19069 1.95239 1.36763 0.93889 0.87232 0.74075 0.76359 1.21716 0.95238 0.94994 0.90301 1.23351 0.96437 0.94779 1.01251 0.85455 0.91977 0.92045 0.89118 0.88594 0.74726 0.78948 0.82608 0.87971 0.74013 1.20656 1.21891 0.83183 0.88070 0.88274 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 10.56 113.37 1.20 1.15 16 2 O -0.36 -0.77 10.56 -51.45 -0.54 -1.32 16 3 C 0.47 1.22 7.49 71.24 0.53 1.75 16 4 O -0.54 -4.52 15.65 21.98 0.34 -4.17 16 5 C -0.11 0.40 4.27 -10.95 -0.05 0.35 16 6 H 0.15 -1.20 8.14 -2.39 -0.02 -1.22 16 7 C -0.13 0.51 7.44 31.18 0.23 0.74 16 8 C 0.12 -0.39 4.24 45.52 0.19 -0.20 16 9 H 0.12 -0.16 7.46 -2.39 -0.02 -0.18 16 10 N -0.70 1.51 5.31 -442.90 -2.35 -0.84 16 11 C 0.57 2.49 7.78 86.78 0.68 3.16 16 12 O -0.56 -6.48 16.02 -3.88 -0.06 -6.54 16 13 C -0.19 -0.74 5.89 -19.99 -0.12 -0.86 16 14 C 0.14 0.24 10.71 85.02 0.91 1.15 16 15 N -0.50 -3.09 10.35 -194.76 -2.01 -5.10 16 16 C 0.11 0.60 9.84 84.71 0.83 1.43 16 17 C -0.14 -0.56 5.43 -19.81 -0.11 -0.67 16 18 C -0.08 0.17 2.83 71.24 0.20 0.37 16 19 O -0.56 0.81 12.75 -148.98 -1.90 -1.09 16 20 Si 0.78 -3.34 29.82 68.60 2.05 -1.30 16 21 C 0.00 0.02 9.31 22.73 0.21 0.23 16 22 C -0.12 0.54 7.15 31.12 0.22 0.77 16 23 H 0.13 -0.87 8.14 -2.39 -0.02 -0.89 16 24 H 0.06 -0.06 8.13 -2.39 -0.02 -0.08 16 25 H 0.06 -0.06 8.13 -2.38 -0.02 -0.08 16 26 H 0.09 -0.30 8.09 -2.39 -0.02 -0.32 16 27 H 0.10 -0.42 8.14 -2.39 -0.02 -0.44 16 28 H 0.41 -2.93 6.79 -92.72 -0.63 -3.56 16 29 H 0.19 -1.17 6.42 -2.91 -0.02 -1.19 16 30 H 0.16 0.57 4.88 -2.91 -0.01 0.55 16 31 H 0.10 -0.65 7.96 -2.39 -0.02 -0.67 16 32 H 0.41 -4.97 8.74 -74.06 -0.65 -5.62 16 33 H -0.28 -0.14 7.11 99.48 0.71 0.57 16 34 H -0.29 -0.93 7.11 99.48 0.71 -0.22 16 35 H 0.15 0.86 7.74 -2.91 -0.02 0.84 16 36 H 0.10 -0.63 8.14 -2.39 -0.02 -0.65 16 37 H 0.10 -0.30 7.41 -2.39 -0.02 -0.32 16 Total: 0.00 -24.81 321.93 0.35 -24.46 By element: Atomic # 1 Polarization: -13.37 SS G_CDS: -0.11 Total: -13.47 kcal Atomic # 6 Polarization: 4.44 SS G_CDS: 4.94 Total: 9.38 kcal Atomic # 7 Polarization: -1.57 SS G_CDS: -4.37 Total: -5.94 kcal Atomic # 8 Polarization: -10.96 SS G_CDS: -2.16 Total: -13.12 kcal Atomic # 14 Polarization: -3.34 SS G_CDS: 2.05 Total: -1.30 kcal Total: -24.81 0.35 -24.46 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10970304_13287814.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -56.756 kcal (2) G-P(sol) polarization free energy of solvation -24.808 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -81.564 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.346 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.462 kcal (6) G-S(sol) free energy of system = (1) + (5) -81.218 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.73 seconds