Wall clock time and date at job start Sat Mar 6 2021 15:35:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45201 * 1 3 3 C 1.34222 * 116.99867 * 2 1 4 4 O 1.20830 * 120.00323 * 359.72425 * 3 2 1 5 5 C 1.50706 * 120.00024 * 180.02562 * 3 2 1 6 6 H 1.09000 * 112.84306 * 310.92373 * 5 3 2 7 7 C 1.53774 * 113.61363 * 82.22530 * 5 3 2 8 8 C 1.53776 * 87.08297 * 139.98346 * 7 5 3 9 9 H 1.09007 * 113.61708 * 89.11220 * 8 7 5 10 10 N 1.46494 * 113.69559 * 220.00744 * 8 7 5 11 11 C 1.34781 * 120.00360 * 252.53495 * 10 8 7 12 12 O 1.21611 * 119.99938 * 359.97438 * 11 10 8 13 13 C 1.47378 * 119.99971 * 179.97438 * 11 10 8 14 14 C 1.36411 * 127.18630 * 179.70651 * 13 11 10 15 15 C 1.50699 * 125.80529 * 0.02562 * 14 13 11 16 16 O 1.33658 * 108.39551 * 179.89933 * 14 13 11 17 17 C 1.34211 * 110.90436 * 0.38715 * 16 14 13 18 18 C 1.50708 * 125.43690 * 179.76170 * 17 16 14 19 19 O 1.42897 * 109.47153 * 245.00489 * 18 17 16 20 20 Si 1.86297 * 109.46860 * 5.00299 * 18 17 16 21 21 C 1.34170 * 109.12829 * 359.76513 * 17 16 14 22 22 C 1.53779 * 113.61440 * 179.72523 * 5 3 2 23 23 H 1.09001 * 109.47271 * 60.00074 * 1 2 3 24 24 H 1.09002 * 109.47225 * 180.02562 * 1 2 3 25 25 H 1.09009 * 109.46864 * 300.00062 * 1 2 3 26 26 H 1.09006 * 113.61632 * 254.53278 * 7 5 3 27 27 H 1.08998 * 113.61806 * 25.43216 * 7 5 3 28 28 H 0.96998 * 120.00123 * 72.53045 * 10 8 7 29 29 H 1.09007 * 109.47263 * 90.00241 * 15 14 13 30 30 H 1.09004 * 109.47288 * 209.99790 * 15 14 13 31 31 H 1.08998 * 109.47392 * 329.99520 * 15 14 13 32 32 H 1.08997 * 109.46804 * 124.99675 * 18 17 16 33 33 H 0.96700 * 114.00377 * 59.99472 * 19 18 17 34 34 H 1.48501 * 110.00168 * 179.97438 * 20 18 17 35 35 H 1.48505 * 110.00308 * 301.31574 * 20 18 17 36 36 H 1.07999 * 127.02815 * 179.97438 * 21 17 16 37 37 H 1.08997 * 113.61503 * 334.56521 * 22 5 3 38 38 H 1.09003 * 113.61665 * 105.47378 * 22 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1959 0.0000 4 8 1.4033 2.2093 -0.0050 5 6 3.5663 1.2749 -0.0006 6 1 4.0237 0.6397 0.7581 7 6 4.1909 1.1170 -1.3969 8 6 5.1809 2.2222 -0.9928 9 1 6.0808 1.8458 -0.5063 10 7 5.4712 3.1743 -2.0676 11 6 6.6694 3.1497 -2.6844 12 8 7.5097 2.3373 -2.3482 13 6 6.9612 4.1072 -3.7660 14 6 8.1178 4.2159 -4.4811 15 6 9.3475 3.3630 -4.3038 16 8 7.9740 5.2057 -5.3678 17 6 6.7605 5.7693 -5.2637 18 6 6.2549 6.9160 -6.1009 19 8 6.0372 8.0553 -5.2663 20 14 7.5158 7.3346 -7.4067 21 6 6.0692 5.1490 -4.2954 22 6 4.1077 2.7142 -0.0073 23 1 -0.3634 0.5138 -0.8900 24 1 -0.3634 -1.0277 0.0005 25 1 -0.3633 0.5139 0.8901 26 1 4.6612 0.1469 -1.5578 27 1 3.5231 1.4046 -2.2090 28 1 4.8012 3.8224 -2.3356 29 1 9.2800 2.4889 -4.9515 30 1 10.2326 3.9424 -4.5666 31 1 9.4195 3.0409 -3.2650 32 1 5.3176 6.6312 -6.5789 33 1 6.8305 8.3646 -4.8080 34 1 7.0290 8.4636 -8.2395 35 1 8.8078 7.6938 -6.7687 36 1 5.0631 5.3701 -3.9709 37 1 3.4172 3.4384 -0.4394 38 1 4.5110 3.0335 0.9538 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10970304_13308374.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:35:28 Heat of formation + Delta-G solvation = -107.947462 kcal Electronic energy + Delta-G solvation = -23528.666486 eV Core-core repulsion = 19726.821764 eV Total energy + Delta-G solvation = -3801.844722 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 296.118 amu Computer time = 0.59 seconds Orbital eigenvalues (eV) -43.75177 -41.93741 -40.63156 -39.06314 -38.20083 -37.31601 -34.73225 -33.91285 -33.08904 -29.68064 -29.23969 -27.16763 -26.93624 -25.71489 -24.27387 -22.75256 -21.76016 -21.23209 -20.27832 -18.99368 -18.89987 -18.02919 -17.86892 -17.69415 -17.39587 -16.82127 -16.50454 -16.27691 -16.00511 -15.79274 -15.56625 -14.82968 -14.46036 -14.31958 -14.25070 -14.07576 -13.91714 -13.88382 -13.70035 -13.52030 -13.05251 -12.98606 -12.86839 -12.57604 -12.36259 -12.10291 -11.87790 -11.79708 -11.37218 -11.05899 -10.89532 -10.73192 -10.12280 -9.58028 -5.02394 0.28847 0.82002 1.08916 1.14257 1.41022 1.63113 1.68481 1.88723 2.21692 2.31376 3.07655 3.16000 3.23912 3.32797 3.57118 3.66823 3.73801 3.75342 3.96421 4.11693 4.15070 4.22478 4.25089 4.36417 4.42673 4.46896 4.53448 4.54133 4.58156 4.64140 4.71796 4.77802 4.78983 5.01790 5.11434 5.20432 5.36452 5.45301 5.89373 6.18068 6.46174 6.71810 7.20045 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.356 6.356 3 C 0.472 3.528 4 O -0.505 6.505 5 C -0.109 4.109 6 H 0.132 0.868 7 C -0.134 4.134 8 C 0.127 3.873 9 H 0.126 0.874 10 N -0.714 5.714 11 C 0.596 3.404 12 O -0.538 6.538 13 C -0.255 4.255 14 C 0.097 3.903 15 C -0.087 4.087 16 O -0.168 6.168 17 C -0.055 4.055 18 C -0.034 4.034 19 O -0.521 6.521 20 Si 0.701 3.299 21 C -0.147 4.147 22 C -0.127 4.127 23 H 0.064 0.936 24 H 0.103 0.897 25 H 0.064 0.936 26 H 0.091 0.909 27 H 0.091 0.909 28 H 0.403 0.597 29 H 0.094 0.906 30 H 0.081 0.919 31 H 0.111 0.889 32 H 0.138 0.862 33 H 0.381 0.619 34 H -0.249 1.249 35 H -0.256 1.256 36 H 0.158 0.842 37 H 0.102 0.898 38 H 0.089 0.911 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.044 -1.783 -1.461 2.306 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.273 6.273 3 C 0.315 3.685 4 O -0.393 6.393 5 C -0.128 4.128 6 H 0.150 0.850 7 C -0.172 4.172 8 C 0.022 3.978 9 H 0.144 0.856 10 N -0.364 5.364 11 C 0.385 3.615 12 O -0.417 6.417 13 C -0.259 4.259 14 C 0.044 3.956 15 C -0.143 4.143 16 O -0.065 6.065 17 C -0.103 4.103 18 C -0.144 4.144 19 O -0.328 6.328 20 Si 0.600 3.400 21 C -0.167 4.167 22 C -0.165 4.165 23 H 0.082 0.918 24 H 0.122 0.878 25 H 0.083 0.917 26 H 0.109 0.891 27 H 0.110 0.890 28 H 0.238 0.762 29 H 0.112 0.888 30 H 0.100 0.900 31 H 0.129 0.871 32 H 0.155 0.845 33 H 0.229 0.771 34 H -0.173 1.173 35 H -0.180 1.180 36 H 0.176 0.824 37 H 0.121 0.879 38 H 0.108 0.892 Dipole moment (debyes) X Y Z Total from point charges 0.457 -1.411 -1.974 2.470 hybrid contribution -0.866 0.853 1.136 1.663 sum -0.409 -0.559 -0.839 1.088 Atomic orbital electron populations 1.23329 0.75920 1.04037 1.02701 1.86520 1.23730 1.33258 1.83755 1.23482 0.91586 0.81430 0.72043 1.90686 1.66995 1.36442 1.45133 1.22311 0.87693 1.00988 1.01855 0.84995 1.23456 0.97984 1.01240 0.94565 1.22437 0.97838 0.89557 0.87955 0.85632 1.45712 1.16239 1.37197 1.37253 1.17195 0.81664 0.82251 0.80434 1.90775 1.46468 1.38996 1.65415 1.21103 0.96325 1.03840 1.04657 1.22930 0.96957 0.88215 0.87533 1.20709 0.90634 0.97026 1.05913 1.83686 1.33320 1.39973 1.49544 1.22550 0.84216 1.00757 1.02739 1.24363 1.09671 0.82475 0.97878 1.86664 1.38286 1.44778 1.63042 0.94388 0.76481 0.87513 0.81578 1.22589 1.00678 0.95767 0.97652 1.23390 0.97185 0.94943 1.01015 0.91770 0.87817 0.91723 0.89076 0.89037 0.76161 0.88780 0.90041 0.87100 0.84491 0.77075 1.17281 1.17955 0.82433 0.87915 0.89232 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.56 101.05 1.07 1.04 16 2 O -0.36 -0.47 10.57 -39.24 -0.41 -0.88 16 3 C 0.47 0.74 7.48 36.01 0.27 1.01 16 4 O -0.51 -2.16 15.65 -18.75 -0.29 -2.46 16 5 C -0.11 0.14 4.26 -90.96 -0.39 -0.25 16 6 H 0.13 -0.40 8.14 -51.93 -0.42 -0.83 16 7 C -0.13 0.18 7.43 -25.93 -0.19 -0.01 16 8 C 0.13 -0.13 4.24 -67.12 -0.28 -0.41 16 9 H 0.13 -0.04 7.46 -51.93 -0.39 -0.43 16 10 N -0.71 0.22 5.35 -54.11 -0.29 -0.07 16 11 C 0.60 1.31 7.81 -12.54 -0.10 1.21 16 12 O -0.54 -2.51 14.45 5.27 0.08 -2.43 16 13 C -0.25 -0.40 6.31 -103.28 -0.65 -1.05 16 14 C 0.10 0.13 7.37 -34.97 -0.26 -0.13 16 15 C -0.09 0.04 9.89 36.00 0.36 0.40 16 16 O -0.17 -0.17 8.90 7.65 0.07 -0.10 16 17 C -0.05 -0.01 6.18 -35.74 -0.22 -0.23 16 18 C -0.03 0.04 2.97 36.01 0.11 0.15 16 19 O -0.52 0.00 12.88 -35.23 -0.45 -0.46 16 20 Si 0.70 -0.91 32.09 -169.99 -5.46 -6.37 16 21 C -0.15 -0.03 10.48 -37.46 -0.39 -0.43 16 22 C -0.13 0.19 7.16 -25.92 -0.19 0.01 16 23 H 0.06 -0.04 8.13 -51.93 -0.42 -0.46 16 24 H 0.10 -0.30 8.14 -51.93 -0.42 -0.73 16 25 H 0.06 -0.04 8.14 -51.92 -0.42 -0.46 16 26 H 0.09 -0.15 8.14 -51.93 -0.42 -0.57 16 27 H 0.09 -0.09 8.09 -51.93 -0.42 -0.51 16 28 H 0.40 -0.80 7.90 -40.82 -0.32 -1.12 16 29 H 0.09 -0.13 8.14 -51.93 -0.42 -0.56 16 30 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 31 H 0.11 0.08 6.49 -51.93 -0.34 -0.26 16 32 H 0.14 -0.37 7.96 -51.93 -0.41 -0.78 16 33 H 0.38 -0.98 8.70 45.56 0.40 -0.59 16 34 H -0.25 -0.32 7.11 56.52 0.40 0.09 16 35 H -0.26 -0.36 7.11 56.52 0.40 0.04 16 36 H 0.16 -0.26 7.74 -52.49 -0.41 -0.66 16 37 H 0.10 -0.07 7.41 -51.93 -0.38 -0.46 16 38 H 0.09 -0.20 8.14 -51.93 -0.42 -0.62 16 LS Contribution 333.12 15.07 5.02 5.02 Total: 0.00 -8.46 333.12 -7.47 -15.93 By element: Atomic # 1 Polarization: -4.63 SS G_CDS: -4.85 Total: -9.49 kcal Atomic # 6 Polarization: 2.18 SS G_CDS: -0.87 Total: 1.30 kcal Atomic # 7 Polarization: 0.22 SS G_CDS: -0.29 Total: -0.07 kcal Atomic # 8 Polarization: -5.31 SS G_CDS: -1.02 Total: -6.33 kcal Atomic # 14 Polarization: -0.91 SS G_CDS: -5.46 Total: -6.37 kcal Total LS contribution 5.02 Total: 5.02 kcal Total: -8.46 -7.47 -15.93 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10970304_13308374.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -92.014 kcal (2) G-P(sol) polarization free energy of solvation -8.464 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -100.479 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.469 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.933 kcal (6) G-S(sol) free energy of system = (1) + (5) -107.947 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.59 seconds