Wall clock time and date at job start Sat Mar 6 2021 15:35:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45202 * 1 3 3 C 1.34233 * 117.00346 * 2 1 4 4 O 1.20828 * 119.99577 * 0.02562 * 3 2 1 5 5 C 1.50699 * 120.00172 * 179.97438 * 3 2 1 6 6 H 1.09004 * 112.84479 * 48.80723 * 5 3 2 7 7 C 1.53778 * 113.61086 * 179.97438 * 5 3 2 8 8 C 1.53787 * 87.08035 * 140.06661 * 7 5 3 9 9 H 1.09004 * 113.61202 * 89.11582 * 8 7 5 10 10 N 1.46496 * 113.61566 * 220.01945 * 8 7 5 11 11 C 1.34776 * 120.00015 * 205.00016 * 10 8 7 12 12 O 1.21599 * 120.00075 * 359.97438 * 11 10 8 13 13 C 1.47558 * 120.00182 * 180.02562 * 11 10 8 14 14 C 1.39832 * 120.00151 * 359.72537 * 13 11 10 15 15 C 1.36556 * 119.99727 * 179.73821 * 14 13 11 16 16 C 1.39817 * 120.00544 * 0.53451 * 15 14 13 17 17 C 1.47560 * 120.00250 * 179.69312 * 16 15 14 18 18 C 1.34981 * 125.27857 * 0.02562 * 17 16 15 19 19 C 1.37799 * 114.70444 * 179.97438 * 18 17 16 20 20 C 1.33742 * 115.07755 * 359.97438 * 19 18 17 21 21 C 1.50696 * 125.11358 * 179.97438 * 20 19 18 22 22 O 1.42904 * 109.47720 * 300.00201 * 21 20 19 23 23 Si 1.86301 * 109.47001 * 180.02562 * 21 20 19 24 24 S 1.75861 * 109.76515 * 359.75853 * 20 19 18 25 25 C 1.39828 * 119.99801 * 359.71876 * 16 15 14 26 26 C 1.36559 * 119.99958 * 0.02562 * 25 16 15 27 27 C 1.53778 * 113.69101 * 277.53681 * 5 3 2 28 28 H 1.08998 * 109.46979 * 179.97438 * 1 2 3 29 29 H 1.09001 * 109.46670 * 299.99840 * 1 2 3 30 30 H 1.08996 * 109.47063 * 59.99778 * 1 2 3 31 31 H 1.08998 * 113.61879 * 25.52144 * 7 5 3 32 32 H 1.08997 * 113.69304 * 254.62230 * 7 5 3 33 33 H 0.96998 * 120.00377 * 24.99850 * 10 8 7 34 34 H 1.08004 * 119.99962 * 359.97438 * 14 13 11 35 35 H 1.08005 * 119.99989 * 180.25263 * 15 14 13 36 36 H 1.08005 * 122.64451 * 359.95631 * 18 17 16 37 37 H 1.07999 * 122.45553 * 180.02562 * 19 18 17 38 38 H 1.09000 * 109.47387 * 60.00108 * 21 20 19 39 39 H 0.96701 * 113.99510 * 300.00506 * 22 21 20 40 40 H 1.48499 * 109.99997 * 180.02562 * 23 21 20 41 41 H 1.48500 * 110.00176 * 301.31941 * 23 21 20 42 42 H 1.08006 * 119.99689 * 179.97438 * 25 16 15 43 43 H 1.08005 * 119.99725 * 179.97438 * 26 25 16 44 44 H 1.08993 * 113.61229 * 105.46294 * 27 5 3 45 45 H 1.09000 * 113.61263 * 334.55944 * 27 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0615 1.1960 0.0000 4 8 1.4034 2.2093 0.0005 5 6 3.5664 1.2748 0.0006 6 1 4.0239 0.6361 -0.7550 7 6 4.1078 2.7141 -0.0001 8 6 5.1821 2.2269 0.9865 9 1 6.0814 1.8482 0.5008 10 7 5.4722 3.1832 2.0577 11 6 6.6707 3.1619 2.6737 12 8 7.5112 2.3487 2.3406 13 6 6.9628 4.1248 3.7530 14 6 5.9981 5.0631 4.1329 15 6 6.2664 5.9506 5.1354 16 6 7.5098 5.9286 5.7744 17 6 7.8022 6.8921 6.8531 18 6 6.9510 7.8363 7.3069 19 6 7.4500 8.6206 8.3241 20 6 8.6977 8.3273 8.7061 21 6 9.4612 9.0387 9.7932 22 8 9.5923 10.4214 9.4569 23 14 11.1535 8.2784 9.9629 24 16 9.3108 6.9826 7.7530 25 6 8.4765 4.9938 5.3910 26 6 8.2063 4.1028 4.3921 27 6 4.1926 1.1230 1.3969 28 1 -0.3633 -1.0277 -0.0005 29 1 -0.3633 0.5138 0.8900 30 1 -0.3633 0.5138 -0.8899 31 1 3.4178 3.4404 0.4294 32 1 4.5101 3.0303 -0.9625 33 1 4.8017 3.8317 2.3237 34 1 5.0393 5.0833 3.6360 35 1 5.5198 6.6727 5.4316 36 1 5.9574 7.9670 6.9042 37 1 6.8753 9.4133 8.7799 38 1 8.9236 8.9438 10.7366 39 1 10.0619 10.5814 8.6268 40 1 11.9164 8.9707 11.0324 41 1 11.0314 6.8330 10.2812 42 1 9.4371 4.9771 5.8844 43 1 8.9531 3.3811 4.0956 44 1 4.6631 0.1537 1.5613 45 1 3.5257 1.4140 2.2084 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10970304_13308390.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:35:31 Heat of formation + Delta-G solvation = -60.776387 kcal Electronic energy + Delta-G solvation = -29297.293651 eV Core-core repulsion = 24953.122919 eV Total energy + Delta-G solvation = -4344.170733 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.107 amu Computer time = 1.06 seconds Orbital eigenvalues (eV) -42.02402 -41.27316 -40.16750 -39.33189 -38.77722 -37.42461 -37.32124 -34.81684 -33.40901 -32.28775 -30.56692 -29.40513 -27.61874 -26.96429 -26.61991 -24.76615 -24.01295 -23.51524 -22.48515 -21.65087 -20.82202 -20.30284 -19.23754 -18.89850 -18.58428 -17.98703 -17.62845 -17.40760 -16.89964 -16.62765 -16.39341 -16.27212 -16.19085 -15.92333 -15.82111 -15.49993 -15.00701 -14.68981 -14.57025 -14.42423 -14.32086 -14.17263 -13.93824 -13.74856 -13.65995 -13.62034 -13.29399 -13.15643 -13.05562 -12.62850 -12.59473 -12.38606 -12.24885 -12.12920 -11.90561 -11.81332 -11.61687 -11.39509 -10.97525 -10.83332 -10.56791 -10.24620 -10.17072 -9.59530 -9.07179 -5.20899 -0.92368 0.22080 0.29064 0.33845 0.71090 1.11971 1.17110 1.49985 1.56826 1.60645 1.84713 1.96293 2.10704 2.79808 3.13159 3.21198 3.29959 3.37869 3.53834 3.58893 3.64300 3.64766 3.69304 3.76189 3.94435 4.12028 4.13691 4.21079 4.23558 4.29935 4.37025 4.39581 4.43634 4.48446 4.50584 4.55710 4.57235 4.69172 4.76837 4.84100 4.93530 4.97215 5.05304 5.17697 5.23024 5.25591 5.34026 5.39599 5.41603 5.67818 6.37464 6.41268 6.69789 7.12201 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.357 6.357 3 C 0.472 3.528 4 O -0.505 6.505 5 C -0.109 4.109 6 H 0.132 0.868 7 C -0.127 4.127 8 C 0.126 3.874 9 H 0.126 0.874 10 N -0.716 5.716 11 C 0.562 3.438 12 O -0.532 6.532 13 C -0.138 4.138 14 C -0.078 4.078 15 C -0.110 4.110 16 C 0.014 3.986 17 C -0.148 4.148 18 C -0.119 4.119 19 C -0.103 4.103 20 C -0.219 4.219 21 C -0.026 4.026 22 O -0.534 6.534 23 Si 0.652 3.348 24 S 0.133 5.867 25 C -0.120 4.120 26 C -0.048 4.048 27 C -0.134 4.134 28 H 0.104 0.896 29 H 0.064 0.936 30 H 0.064 0.936 31 H 0.103 0.897 32 H 0.090 0.910 33 H 0.402 0.598 34 H 0.130 0.870 35 H 0.134 0.866 36 H 0.145 0.855 37 H 0.146 0.854 38 H 0.124 0.876 39 H 0.381 0.619 40 H -0.232 1.232 41 H -0.237 1.237 42 H 0.131 0.869 43 H 0.142 0.858 44 H 0.091 0.909 45 H 0.091 0.909 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.983 0.505 -1.178 1.615 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.273 6.273 3 C 0.315 3.685 4 O -0.393 6.393 5 C -0.129 4.129 6 H 0.150 0.850 7 C -0.165 4.165 8 C 0.021 3.979 9 H 0.144 0.856 10 N -0.368 5.368 11 C 0.350 3.650 12 O -0.409 6.409 13 C -0.141 4.141 14 C -0.096 4.096 15 C -0.130 4.130 16 C 0.012 3.988 17 C -0.265 4.265 18 C -0.150 4.150 19 C -0.134 4.134 20 C -0.337 4.337 21 C -0.140 4.140 22 O -0.340 6.340 23 Si 0.551 3.449 24 S 0.400 5.600 25 C -0.139 4.139 26 C -0.067 4.067 27 C -0.173 4.173 28 H 0.122 0.878 29 H 0.082 0.918 30 H 0.083 0.917 31 H 0.121 0.879 32 H 0.108 0.892 33 H 0.239 0.761 34 H 0.148 0.852 35 H 0.152 0.848 36 H 0.163 0.837 37 H 0.164 0.836 38 H 0.141 0.859 39 H 0.229 0.771 40 H -0.155 1.155 41 H -0.161 1.161 42 H 0.149 0.851 43 H 0.160 0.840 44 H 0.109 0.891 45 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges 1.041 -0.929 -0.318 1.431 hybrid contribution -2.710 1.146 0.255 2.953 sum -1.668 0.217 -0.063 1.684 Atomic orbital electron populations 1.23329 0.75895 1.04059 1.02702 1.86523 1.23750 1.33259 1.83741 1.23474 0.91571 0.81436 0.72039 1.90683 1.66987 1.36437 1.45149 1.22308 0.87712 1.00991 1.01848 0.84977 1.23385 0.97110 0.94954 1.01049 1.22470 0.97913 0.89515 0.88030 0.85576 1.45853 1.16303 1.37044 1.37573 1.18249 0.81739 0.83420 0.81575 1.90811 1.46426 1.38846 1.64787 1.19995 0.96204 0.98629 0.99284 1.20967 0.98466 0.93905 0.96309 1.20871 0.96096 0.99689 0.96314 1.18301 0.94182 0.93328 0.93024 1.23081 0.98751 1.02231 1.02441 1.20397 1.00981 0.95575 0.98013 1.20002 0.94544 1.00977 0.97836 1.25094 1.00009 1.03217 1.05339 1.24414 1.07741 0.85507 0.96303 1.86528 1.80674 1.21232 1.45525 0.95002 0.78683 0.80721 0.90494 1.84152 1.15386 1.30944 1.29515 1.20980 0.99230 0.95505 0.98192 1.20947 0.95589 0.97027 0.93114 1.23468 0.97954 1.01275 0.94602 0.87808 0.91772 0.91702 0.87898 0.89157 0.76140 0.85208 0.84804 0.83744 0.83650 0.85898 0.77112 1.15521 1.16136 0.85120 0.84010 0.89054 0.89013 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 101.05 1.07 1.04 16 2 O -0.36 -0.39 10.57 -39.26 -0.41 -0.81 16 3 C 0.47 0.58 7.49 36.01 0.27 0.85 16 4 O -0.51 -1.94 15.65 -18.75 -0.29 -2.23 16 5 C -0.11 0.17 4.25 -90.96 -0.39 -0.21 16 6 H 0.13 -0.43 8.14 -51.93 -0.42 -0.86 16 7 C -0.13 0.26 7.16 -25.92 -0.19 0.07 16 8 C 0.13 -0.17 4.24 -67.10 -0.28 -0.46 16 9 H 0.13 -0.07 7.47 -51.93 -0.39 -0.45 16 10 N -0.72 0.76 5.30 -54.02 -0.29 0.48 16 11 C 0.56 0.96 7.76 -12.46 -0.10 0.86 16 12 O -0.53 -2.77 15.93 5.28 0.08 -2.68 16 13 C -0.14 -0.08 5.88 -104.91 -0.62 -0.70 16 14 C -0.08 0.11 9.48 -39.59 -0.38 -0.27 16 15 C -0.11 0.12 9.48 -39.60 -0.38 -0.26 16 16 C 0.01 0.00 5.88 -104.91 -0.62 -0.61 16 17 C -0.15 -0.03 6.37 -36.94 -0.24 -0.27 16 18 C -0.12 0.05 9.64 -40.90 -0.39 -0.34 16 19 C -0.10 0.02 10.00 -41.32 -0.41 -0.40 16 20 C -0.22 0.05 5.73 -35.89 -0.21 -0.16 16 21 C -0.03 0.02 2.96 36.00 0.11 0.12 16 22 O -0.53 0.17 12.86 -35.23 -0.45 -0.28 16 23 Si 0.65 -0.71 30.96 -169.99 -5.26 -5.97 16 24 S 0.13 -0.04 19.46 -107.50 -2.09 -2.13 16 25 C -0.12 -0.03 9.54 -39.59 -0.38 -0.41 16 26 C -0.05 -0.04 9.53 -39.59 -0.38 -0.42 16 27 C -0.13 0.22 7.43 -25.90 -0.19 0.03 16 28 H 0.10 -0.32 8.14 -51.93 -0.42 -0.75 16 29 H 0.06 -0.05 8.13 -51.93 -0.42 -0.48 16 30 H 0.06 -0.05 8.13 -51.93 -0.42 -0.47 16 31 H 0.10 -0.15 7.41 -51.93 -0.38 -0.54 16 32 H 0.09 -0.25 8.14 -51.93 -0.42 -0.67 16 33 H 0.40 -1.33 6.74 -40.82 -0.28 -1.60 16 34 H 0.13 -0.54 6.38 -52.48 -0.34 -0.87 16 35 H 0.13 -0.41 6.74 -52.48 -0.35 -0.76 16 36 H 0.14 -0.33 6.88 -52.48 -0.36 -0.69 16 37 H 0.15 -0.13 8.06 -52.49 -0.42 -0.55 16 38 H 0.12 -0.07 7.96 -51.93 -0.41 -0.48 16 39 H 0.38 -1.53 8.70 45.56 0.40 -1.13 16 40 H -0.23 -0.35 7.11 56.52 0.40 0.05 16 41 H -0.24 -0.25 7.11 56.52 0.40 0.15 16 42 H 0.13 -0.12 7.26 -52.48 -0.38 -0.51 16 43 H 0.14 0.12 7.64 -52.48 -0.40 -0.28 16 44 H 0.09 -0.16 8.14 -51.93 -0.42 -0.58 16 45 H 0.09 -0.13 8.10 -51.93 -0.42 -0.55 16 LS Contribution 396.48 15.07 5.97 5.97 Total: 0.00 -9.30 396.48 -11.91 -21.21 By element: Atomic # 1 Polarization: -6.56 SS G_CDS: -5.47 Total: -12.03 kcal Atomic # 6 Polarization: 2.17 SS G_CDS: -3.69 Total: -1.53 kcal Atomic # 7 Polarization: 0.76 SS G_CDS: -0.29 Total: 0.48 kcal Atomic # 8 Polarization: -4.93 SS G_CDS: -1.08 Total: -6.01 kcal Atomic # 14 Polarization: -0.71 SS G_CDS: -5.26 Total: -5.97 kcal Atomic # 16 Polarization: -0.04 SS G_CDS: -2.09 Total: -2.13 kcal Total LS contribution 5.97 Total: 5.97 kcal Total: -9.30 -11.91 -21.21 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10970304_13308390.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -39.565 kcal (2) G-P(sol) polarization free energy of solvation -9.305 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -48.870 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.906 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.211 kcal (6) G-S(sol) free energy of system = (1) + (5) -60.776 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.06 seconds