Wall clock time and date at job start Sat Mar 6 2021 15:35:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45197 * 1 3 3 C 1.34225 * 117.00291 * 2 1 4 4 O 1.20825 * 119.99818 * 359.97438 * 3 2 1 5 5 C 1.50699 * 120.00275 * 180.02562 * 3 2 1 6 6 H 1.09003 * 112.90393 * 311.24768 * 5 3 2 7 7 C 1.53954 * 113.66945 * 82.43602 * 5 3 2 8 8 C 1.53781 * 87.01947 * 139.93656 * 7 5 3 9 9 H 1.08998 * 113.61382 * 89.22624 * 8 7 5 10 10 N 1.46494 * 113.61338 * 220.05029 * 8 7 5 11 11 C 1.34784 * 119.99863 * 254.13278 * 10 8 7 12 12 O 1.21585 * 120.00129 * 0.02562 * 11 10 8 13 13 C 1.47538 * 119.99579 * 180.02562 * 11 10 8 14 14 C 1.40143 * 120.18566 * 180.27666 * 13 11 10 15 15 O 1.35657 * 120.15367 * 0.02562 * 14 13 11 16 16 C 1.38708 * 119.69903 * 180.29237 * 14 13 11 17 17 C 1.38056 * 120.08200 * 359.42763 * 16 14 13 18 18 C 1.50701 * 119.80548 * 180.25436 * 17 16 14 19 19 O 1.42896 * 109.47079 * 65.00495 * 18 17 16 20 20 Si 1.86298 * 109.47020 * 185.00250 * 18 17 16 21 21 C 1.38555 * 120.39120 * 0.27853 * 17 16 14 22 22 C 1.37790 * 120.29638 * 0.02562 * 21 17 16 23 23 C 1.53779 * 113.61879 * 180.02562 * 5 3 2 24 24 H 1.09000 * 109.47549 * 179.97438 * 1 2 3 25 25 H 1.08997 * 109.47042 * 299.99857 * 1 2 3 26 26 H 1.09001 * 109.47486 * 60.00144 * 1 2 3 27 27 H 1.08995 * 113.61287 * 25.41690 * 7 5 3 28 28 H 1.08999 * 113.66475 * 254.46120 * 7 5 3 29 29 H 0.96997 * 120.00228 * 74.13168 * 10 8 7 30 30 H 0.96701 * 113.99398 * 270.27108 * 15 14 13 31 31 H 1.08002 * 119.96289 * 179.71080 * 16 14 13 32 32 H 1.08994 * 109.46963 * 305.00251 * 18 17 16 33 33 H 0.96701 * 113.99798 * 180.02562 * 19 18 17 34 34 H 1.48502 * 109.99888 * 178.67847 * 20 18 17 35 35 H 1.48500 * 110.00324 * 299.99870 * 20 18 17 36 36 H 1.07997 * 119.85142 * 179.97438 * 21 17 16 37 37 H 1.08002 * 120.04333 * 179.97438 * 22 21 17 38 38 H 1.08999 * 113.61978 * 105.45875 * 23 5 3 39 39 H 1.09007 * 113.61066 * 334.56373 * 23 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4034 2.2093 -0.0005 5 6 3.5663 1.2748 -0.0006 6 1 4.0249 0.6357 0.7540 7 6 4.1927 1.1221 -1.3986 8 6 5.1808 2.2268 -0.9886 9 1 6.0812 1.8494 -0.5041 10 7 5.4695 3.1832 -2.0600 11 6 6.6557 3.1420 -2.6986 12 8 7.4861 2.3108 -2.3856 13 6 6.9466 4.1055 -3.7773 14 6 8.1765 4.0626 -4.4477 15 8 9.1056 3.1342 -4.1083 16 6 8.4418 4.9772 -5.4562 17 6 7.4929 5.9174 -5.8048 18 6 7.7854 6.9045 -6.9054 19 8 7.9250 6.2080 -8.1452 20 14 6.3840 8.1253 -7.0333 21 6 6.2734 5.9592 -5.1485 22 6 5.9956 5.0623 -4.1401 23 6 4.1079 2.7141 0.0001 24 1 -0.3634 -1.0276 -0.0005 25 1 -0.3633 0.5138 0.8900 26 1 -0.3634 0.5138 -0.8900 27 1 3.5254 1.4123 -2.2101 28 1 4.6646 0.1534 -1.5632 29 1 4.8069 3.8460 -2.3100 30 1 9.7147 3.4226 -3.4148 31 1 9.3900 4.9510 -5.9725 32 1 8.7104 7.4355 -6.6807 33 1 8.1152 6.7822 -8.8997 34 1 6.6750 9.1233 -8.0937 35 1 5.1169 7.4139 -7.3393 36 1 5.5375 6.6987 -5.4281 37 1 5.0438 5.0988 -3.6310 38 1 4.5112 3.0285 0.9627 39 1 3.4172 3.4406 -0.4281 There are 56 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 56 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10970304_13422076.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:35:34 Heat of formation + Delta-G solvation = -129.669537 kcal Electronic energy + Delta-G solvation = -24767.199570 eV Core-core repulsion = 20836.186768 eV Total energy + Delta-G solvation = -3931.012802 eV No. of doubly occupied orbitals = 56 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 308.118 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -42.01643 -41.45917 -40.22981 -38.99058 -38.28925 -37.31139 -37.27877 -34.65728 -32.74216 -31.09677 -29.43448 -27.85670 -26.93706 -26.56328 -23.89026 -23.64043 -22.35898 -21.53252 -20.80974 -19.25810 -18.90857 -18.68467 -18.53066 -17.97159 -17.42398 -17.31400 -16.78174 -16.39601 -16.18409 -16.11678 -15.71797 -15.57736 -15.21417 -14.74419 -14.40013 -14.23811 -14.07601 -13.96781 -13.71339 -13.58805 -13.33313 -13.08018 -13.02938 -12.58601 -12.46340 -12.36720 -12.08695 -11.86831 -11.79430 -11.60967 -11.36964 -10.76756 -10.64080 -10.18096 -10.02401 -9.77101 -5.07940 -0.39451 0.13566 1.13143 1.14122 1.48956 1.62984 1.74608 1.85233 2.13527 2.56318 3.03955 3.16051 3.22441 3.25888 3.54087 3.57792 3.67047 3.67510 3.71874 3.95559 4.03949 4.15300 4.19148 4.22508 4.22849 4.39281 4.46731 4.53616 4.56431 4.58740 4.70404 4.73346 4.80229 4.97736 5.00089 5.13932 5.24273 5.36529 5.43783 5.54410 6.30701 6.42572 6.71892 6.72822 7.20127 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.356 6.356 3 C 0.472 3.528 4 O -0.506 6.506 5 C -0.109 4.109 6 H 0.132 0.868 7 C -0.135 4.135 8 C 0.128 3.872 9 H 0.125 0.875 10 N -0.719 5.719 11 C 0.562 3.438 12 O -0.516 6.516 13 C -0.166 4.166 14 C 0.174 3.826 15 O -0.476 6.476 16 C -0.128 4.128 17 C -0.029 4.029 18 C -0.083 4.083 19 O -0.534 6.534 20 Si 0.687 3.313 21 C -0.134 4.134 22 C -0.064 4.064 23 C -0.126 4.126 24 H 0.103 0.897 25 H 0.064 0.936 26 H 0.063 0.937 27 H 0.091 0.909 28 H 0.091 0.909 29 H 0.401 0.599 30 H 0.398 0.602 31 H 0.139 0.861 32 H 0.082 0.918 33 H 0.383 0.617 34 H -0.259 1.259 35 H -0.253 1.253 36 H 0.136 0.864 37 H 0.135 0.865 38 H 0.090 0.910 39 H 0.103 0.897 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.775 4.241 1.776 4.663 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.273 6.273 3 C 0.315 3.685 4 O -0.393 6.393 5 C -0.129 4.129 6 H 0.150 0.850 7 C -0.173 4.173 8 C 0.023 3.977 9 H 0.143 0.857 10 N -0.371 5.371 11 C 0.350 3.650 12 O -0.392 6.392 13 C -0.170 4.170 14 C 0.127 3.873 15 O -0.287 6.287 16 C -0.147 4.147 17 C -0.029 4.029 18 C -0.192 4.192 19 O -0.341 6.341 20 Si 0.588 3.412 21 C -0.151 4.151 22 C -0.083 4.083 23 C -0.164 4.164 24 H 0.122 0.878 25 H 0.083 0.917 26 H 0.082 0.918 27 H 0.110 0.890 28 H 0.109 0.891 29 H 0.237 0.763 30 H 0.256 0.744 31 H 0.157 0.843 32 H 0.099 0.901 33 H 0.231 0.769 34 H -0.184 1.184 35 H -0.178 1.178 36 H 0.154 0.846 37 H 0.153 0.847 38 H 0.108 0.892 39 H 0.121 0.879 Dipole moment (debyes) X Y Z Total from point charges -1.408 3.406 1.464 3.966 hybrid contribution 0.120 0.305 -0.884 0.942 sum -1.288 3.711 0.580 3.971 Atomic orbital electron populations 1.23325 0.75920 1.04044 1.02689 1.86522 1.23730 1.33272 1.83734 1.23473 0.91577 0.81426 0.72014 1.90679 1.66997 1.36436 1.45188 1.22345 0.87687 1.00996 1.01867 0.85006 1.23495 0.97985 1.01340 0.94526 1.22433 0.97835 0.89501 0.87963 0.85717 1.45861 1.17590 1.36306 1.37333 1.18071 0.81841 0.83675 0.81460 1.90831 1.46364 1.37079 1.64935 1.20395 0.96992 0.99582 0.99996 1.18471 0.88590 0.87455 0.92774 1.84774 1.45018 1.38841 1.60058 1.21326 1.01117 0.94080 0.98178 1.19323 0.93456 0.95546 0.94590 1.24896 1.09837 0.99690 0.84774 1.86602 1.93732 1.36872 1.16913 0.95026 0.77485 0.78907 0.89800 1.20933 0.96335 1.00215 0.97639 1.21121 0.98142 0.93024 0.96006 1.23383 0.97121 0.94941 1.00967 0.87829 0.91704 0.91785 0.89046 0.89077 0.76267 0.74395 0.84307 0.90058 0.76903 1.18445 1.17767 0.84633 0.84740 0.89167 0.87886 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.56 101.05 1.07 1.05 16 2 O -0.36 -0.49 10.56 -39.24 -0.41 -0.90 16 3 C 0.47 0.70 7.49 36.01 0.27 0.97 16 4 O -0.51 -2.03 15.65 -18.75 -0.29 -2.32 16 5 C -0.11 0.15 4.26 -90.87 -0.39 -0.24 16 6 H 0.13 -0.40 8.14 -51.93 -0.42 -0.82 16 7 C -0.13 0.15 7.44 -25.83 -0.19 -0.04 16 8 C 0.13 -0.15 4.21 -67.10 -0.28 -0.43 16 9 H 0.13 -0.05 7.50 -51.93 -0.39 -0.43 16 10 N -0.72 0.55 5.31 -54.04 -0.29 0.27 16 11 C 0.56 1.25 7.76 -12.47 -0.10 1.16 16 12 O -0.52 -2.89 14.78 -16.59 -0.25 -3.13 16 13 C -0.17 -0.22 5.89 -104.85 -0.62 -0.84 16 14 C 0.17 0.38 6.72 -38.69 -0.26 0.12 16 15 O -0.48 -1.36 11.58 -40.55 -0.47 -1.83 16 16 C -0.13 -0.16 9.60 -39.47 -0.38 -0.53 16 17 C -0.03 -0.01 5.39 -104.57 -0.56 -0.57 16 18 C -0.08 0.09 2.78 36.01 0.10 0.19 16 19 O -0.53 -0.29 12.81 -35.23 -0.45 -0.74 16 20 Si 0.69 -1.43 29.83 -169.99 -5.07 -6.50 16 21 C -0.13 0.12 8.64 -39.63 -0.34 -0.22 16 22 C -0.06 0.07 9.53 -39.20 -0.37 -0.30 16 23 C -0.13 0.25 7.16 -25.90 -0.19 0.06 16 24 H 0.10 -0.30 8.14 -51.93 -0.42 -0.72 16 25 H 0.06 -0.04 8.13 -51.93 -0.42 -0.46 16 26 H 0.06 -0.04 8.13 -51.93 -0.42 -0.46 16 27 H 0.09 -0.07 8.10 -51.93 -0.42 -0.49 16 28 H 0.09 -0.10 8.14 -51.93 -0.42 -0.52 16 29 H 0.40 -1.24 6.74 -40.82 -0.28 -1.52 16 30 H 0.40 -0.47 9.06 45.56 0.41 -0.06 16 31 H 0.14 0.08 8.06 -52.49 -0.42 -0.34 16 32 H 0.08 -0.24 7.96 -51.93 -0.41 -0.65 16 33 H 0.38 -1.34 8.74 45.56 0.40 -0.94 16 34 H -0.26 -0.03 7.11 56.52 0.40 0.37 16 35 H -0.25 -0.24 7.04 56.52 0.40 0.16 16 36 H 0.14 -0.38 4.83 -52.49 -0.25 -0.64 16 37 H 0.13 -0.56 6.40 -52.49 -0.34 -0.89 16 38 H 0.09 -0.25 8.14 -51.93 -0.42 -0.68 16 39 H 0.10 -0.15 7.41 -51.92 -0.38 -0.53 16 LS Contribution 335.75 15.07 5.06 5.06 Total: 0.00 -11.11 335.75 -8.24 -19.35 By element: Atomic # 1 Polarization: -5.80 SS G_CDS: -3.82 Total: -9.62 kcal Atomic # 6 Polarization: 2.61 SS G_CDS: -2.24 Total: 0.37 kcal Atomic # 7 Polarization: 0.55 SS G_CDS: -0.29 Total: 0.27 kcal Atomic # 8 Polarization: -7.05 SS G_CDS: -1.87 Total: -8.93 kcal Atomic # 14 Polarization: -1.43 SS G_CDS: -5.07 Total: -6.50 kcal Total LS contribution 5.06 Total: 5.06 kcal Total: -11.11 -8.24 -19.35 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10970304_13422076.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -110.318 kcal (2) G-P(sol) polarization free energy of solvation -11.115 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -121.433 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.237 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.352 kcal (6) G-S(sol) free energy of system = (1) + (5) -129.670 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds