Wall clock time and date at job start Sat Mar 6 2021 15:35:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45204 * 1 3 3 C 1.34222 * 116.99862 * 2 1 4 4 O 1.20830 * 120.00447 * 0.02562 * 3 2 1 5 5 C 1.50702 * 119.99856 * 179.97438 * 3 2 1 6 6 H 1.08999 * 112.84851 * 311.19816 * 5 3 2 7 7 C 1.53781 * 113.61320 * 82.50219 * 5 3 2 8 8 C 1.53786 * 87.07924 * 139.98068 * 7 5 3 9 9 H 1.09005 * 113.68847 * 89.12750 * 8 7 5 10 10 N 1.46498 * 113.61702 * 220.01549 * 8 7 5 11 11 C 1.34768 * 120.00297 * 252.50143 * 10 8 7 12 12 O 1.21586 * 120.00323 * 0.02562 * 11 10 8 13 13 C 1.47538 * 119.99927 * 179.97438 * 11 10 8 14 14 C 1.40139 * 120.19043 * 180.25573 * 13 11 10 15 15 O 1.35650 * 120.15564 * 0.02562 * 14 13 11 16 16 C 1.38716 * 119.69630 * 180.27785 * 14 13 11 17 17 C 1.50702 * 119.95512 * 179.72151 * 16 14 13 18 18 O 1.42903 * 109.47022 * 285.01986 * 17 16 14 19 19 Si 1.86300 * 109.47076 * 165.02131 * 17 16 14 20 20 C 1.38051 * 120.08681 * 359.74230 * 16 14 13 21 21 C 1.38548 * 120.38806 * 359.97438 * 20 16 14 22 22 C 1.50703 * 119.85025 * 179.97438 * 21 20 16 23 23 C 1.37790 * 120.30332 * 359.97438 * 21 20 16 24 24 C 1.53780 * 113.61494 * 180.02562 * 5 3 2 25 25 H 1.09000 * 109.47174 * 179.97438 * 1 2 3 26 26 H 1.08997 * 109.47339 * 300.00060 * 1 2 3 27 27 H 1.09002 * 109.46940 * 59.99620 * 1 2 3 28 28 H 1.09004 * 113.61412 * 25.43884 * 7 5 3 29 29 H 1.08999 * 113.61603 * 254.53101 * 7 5 3 30 30 H 0.97006 * 119.99442 * 72.50048 * 10 8 7 31 31 H 0.96699 * 114.00170 * 270.26367 * 15 14 13 32 32 H 1.08993 * 109.47300 * 45.02055 * 17 16 14 33 33 H 0.96697 * 113.99833 * 179.97438 * 18 17 16 34 34 H 1.48507 * 109.99915 * 59.99853 * 19 17 16 35 35 H 1.48501 * 110.00257 * 181.31676 * 19 17 16 36 36 H 1.07999 * 119.80984 * 180.02562 * 20 16 14 37 37 H 1.09000 * 109.47205 * 269.98161 * 22 21 20 38 38 H 1.09001 * 109.47112 * 29.98063 * 22 21 20 39 39 H 1.08996 * 109.47240 * 149.97924 * 22 21 20 40 40 H 1.08002 * 120.04466 * 180.02562 * 23 21 20 41 41 H 1.09002 * 113.61535 * 105.47398 * 24 5 3 42 42 H 1.09000 * 113.69062 * 334.57500 * 24 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2748 0.0006 6 1 4.0233 0.6364 0.7567 7 6 4.1916 1.1232 -1.3961 8 6 5.1814 2.2266 -0.9865 9 1 6.0816 1.8493 -0.5013 10 7 5.4710 3.1826 -2.0582 11 6 6.6691 3.1612 -2.6748 12 8 7.5097 2.3481 -2.3421 13 6 6.9605 4.1236 -3.7544 14 6 8.2031 4.1014 -4.4020 15 8 9.1442 3.1942 -4.0396 16 6 8.4682 5.0148 -5.4117 17 6 9.8048 5.0002 -6.1077 18 8 10.7960 5.5653 -5.2474 19 14 9.6995 6.0011 -7.6755 20 6 7.5094 5.9374 -5.7796 21 6 6.2776 5.9587 -5.1458 22 6 5.2401 6.9715 -5.5567 23 6 5.9968 5.0581 -4.1415 24 6 4.1078 2.7141 0.0011 25 1 -0.3633 -1.0277 -0.0005 26 1 -0.3634 0.5138 0.8899 27 1 -0.3633 0.5139 -0.8900 28 1 3.5243 1.4144 -2.2073 29 1 4.6621 0.1538 -1.5610 30 1 4.8002 3.8311 -2.3239 31 1 9.7346 3.4992 -3.3371 32 1 10.0770 3.9730 -6.3501 33 1 11.6833 5.5879 -5.6312 34 1 9.3290 7.4039 -7.3585 35 1 11.0024 5.9684 -8.3874 36 1 7.7205 6.6462 -6.5667 37 1 5.3589 7.8760 -4.9601 38 1 5.3662 7.2132 -6.6121 39 1 4.2446 6.5580 -5.3952 40 1 5.0350 5.0782 -3.6505 41 1 4.5105 3.0288 0.9639 42 1 3.4184 3.4416 -0.4275 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10970304_13422088.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:35:37 Heat of formation + Delta-G solvation = -135.341790 kcal Electronic energy + Delta-G solvation = -27007.648232 eV Core-core repulsion = 22920.851844 eV Total energy + Delta-G solvation = -4086.796389 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 322.134 amu Computer time = 0.75 seconds Orbital eigenvalues (eV) -42.02820 -41.53348 -40.29406 -38.93920 -37.99197 -37.65434 -37.29057 -34.66326 -33.20797 -32.64737 -29.39964 -27.67960 -27.10880 -26.92956 -26.73630 -24.91648 -22.47878 -21.83814 -21.47484 -20.66272 -19.43494 -18.91259 -18.59777 -18.18782 -17.97615 -17.45914 -17.31200 -16.73491 -16.38781 -16.16650 -15.96180 -15.73756 -15.35564 -15.07675 -14.88290 -14.57927 -14.39358 -14.23593 -14.10069 -13.80957 -13.70409 -13.54124 -13.23468 -13.08311 -13.04435 -12.60669 -12.58728 -12.46317 -12.35272 -11.86727 -11.82512 -11.79526 -11.63212 -11.36533 -10.76717 -10.46939 -10.19002 -10.01603 -9.49736 -5.03181 -0.30629 0.07524 1.14171 1.20089 1.51381 1.63174 1.76305 1.86457 2.15396 2.56066 3.16063 3.18866 3.24416 3.26133 3.54066 3.58948 3.63371 3.67602 3.75608 3.95981 4.06166 4.10054 4.15207 4.22458 4.25421 4.42552 4.43611 4.47490 4.53784 4.58194 4.58497 4.59989 4.71396 4.75513 4.80359 4.94532 4.98720 5.02390 5.20704 5.34109 5.36482 5.44527 5.59592 6.37580 6.44176 6.71909 6.78461 7.22167 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.356 6.356 3 C 0.472 3.528 4 O -0.506 6.506 5 C -0.109 4.109 6 H 0.132 0.868 7 C -0.134 4.134 8 C 0.128 3.872 9 H 0.125 0.875 10 N -0.719 5.719 11 C 0.563 3.437 12 O -0.516 6.516 13 C -0.166 4.166 14 C 0.191 3.809 15 O -0.473 6.473 16 C -0.105 4.105 17 C -0.072 4.072 18 O -0.537 6.537 19 Si 0.688 3.312 20 C -0.075 4.075 21 C -0.097 4.097 22 C -0.117 4.117 23 C -0.067 4.067 24 C -0.127 4.127 25 H 0.103 0.897 26 H 0.064 0.936 27 H 0.063 0.937 28 H 0.091 0.909 29 H 0.091 0.909 30 H 0.401 0.599 31 H 0.399 0.601 32 H 0.082 0.918 33 H 0.382 0.618 34 H -0.253 1.253 35 H -0.259 1.259 36 H 0.136 0.864 37 H 0.074 0.926 38 H 0.072 0.928 39 H 0.072 0.928 40 H 0.131 0.869 41 H 0.089 0.911 42 H 0.102 0.898 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.573 0.998 -2.092 3.463 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.273 6.273 3 C 0.315 3.685 4 O -0.393 6.393 5 C -0.129 4.129 6 H 0.150 0.850 7 C -0.173 4.173 8 C 0.022 3.978 9 H 0.143 0.857 10 N -0.371 5.371 11 C 0.350 3.650 12 O -0.392 6.392 13 C -0.169 4.169 14 C 0.144 3.856 15 O -0.285 6.285 16 C -0.105 4.105 17 C -0.182 4.182 18 O -0.345 6.345 19 Si 0.590 3.410 20 C -0.093 4.093 21 C -0.097 4.097 22 C -0.173 4.173 23 C -0.086 4.086 24 C -0.165 4.165 25 H 0.122 0.878 26 H 0.083 0.917 27 H 0.082 0.918 28 H 0.110 0.890 29 H 0.109 0.891 30 H 0.237 0.763 31 H 0.258 0.742 32 H 0.100 0.900 33 H 0.230 0.770 34 H -0.178 1.178 35 H -0.184 1.184 36 H 0.153 0.847 37 H 0.093 0.907 38 H 0.091 0.909 39 H 0.090 0.910 40 H 0.149 0.851 41 H 0.108 0.892 42 H 0.121 0.879 Dipole moment (debyes) X Y Z Total from point charges -2.641 1.085 -2.319 3.678 hybrid contribution 0.654 0.558 0.862 1.217 sum -1.988 1.642 -1.458 2.962 Atomic orbital electron populations 1.23328 0.75920 1.04045 1.02691 1.86523 1.23732 1.33261 1.83738 1.23479 0.91577 0.81426 0.72011 1.90681 1.67001 1.36436 1.45186 1.22314 0.87687 1.00989 1.01877 0.85002 1.23461 0.97965 1.01320 0.94528 1.22437 0.97832 0.89504 0.87989 0.85674 1.45852 1.16350 1.37190 1.37694 1.18050 0.81929 0.83460 0.81513 1.90830 1.46124 1.38048 1.64192 1.20325 0.96524 1.00017 1.00071 1.18189 0.88143 0.87396 0.91890 1.84665 1.45312 1.39373 1.59102 1.19543 0.95237 0.96374 0.99371 1.24704 0.87489 1.04055 1.01909 1.86540 1.20494 1.84310 1.43123 0.94917 0.86552 0.80825 0.78748 1.21117 0.92597 0.96594 0.98984 1.19773 0.95480 0.97842 0.96627 1.20836 0.96860 0.97329 1.02313 1.21126 0.98186 0.93296 0.95955 1.23393 0.97164 0.94938 1.01013 0.87818 0.91717 0.91776 0.89018 0.89073 0.76313 0.74248 0.89958 0.77012 1.17816 1.18356 0.84651 0.90702 0.90883 0.90953 0.85081 0.89236 0.87920 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.56 101.05 1.07 1.04 16 2 O -0.36 -0.47 10.57 -39.24 -0.41 -0.89 16 3 C 0.47 0.71 7.48 36.01 0.27 0.98 16 4 O -0.51 -2.06 15.65 -18.75 -0.29 -2.35 16 5 C -0.11 0.13 4.26 -90.96 -0.39 -0.25 16 6 H 0.13 -0.38 8.14 -51.93 -0.42 -0.80 16 7 C -0.13 0.16 7.43 -25.92 -0.19 -0.03 16 8 C 0.13 -0.11 4.24 -67.10 -0.28 -0.39 16 9 H 0.13 0.01 7.46 -51.93 -0.39 -0.38 16 10 N -0.72 0.27 5.31 -54.04 -0.29 -0.01 16 11 C 0.56 1.51 7.76 -12.47 -0.10 1.42 16 12 O -0.52 -3.10 14.76 -16.59 -0.24 -3.35 16 13 C -0.17 -0.31 5.89 -104.84 -0.62 -0.93 16 14 C 0.19 0.54 6.69 -38.69 -0.26 0.28 16 15 O -0.47 -1.69 10.91 -40.53 -0.44 -2.13 16 16 C -0.10 -0.16 5.30 -104.51 -0.55 -0.71 16 17 C -0.07 -0.02 2.37 36.01 0.09 0.06 16 18 O -0.54 -0.49 12.86 -35.23 -0.45 -0.94 16 19 Si 0.69 -0.77 30.19 -169.99 -5.13 -5.90 16 20 C -0.08 -0.01 8.30 -39.54 -0.33 -0.34 16 21 C -0.10 0.06 5.87 -104.67 -0.61 -0.55 16 22 C -0.12 0.33 10.00 36.01 0.36 0.69 16 23 C -0.07 0.04 9.18 -39.20 -0.36 -0.32 16 24 C -0.13 0.21 7.16 -25.90 -0.19 0.02 16 25 H 0.10 -0.31 8.14 -51.93 -0.42 -0.73 16 26 H 0.06 -0.04 8.13 -51.93 -0.42 -0.46 16 27 H 0.06 -0.04 8.13 -51.93 -0.42 -0.47 16 28 H 0.09 -0.09 8.09 -51.93 -0.42 -0.51 16 29 H 0.09 -0.11 8.14 -51.93 -0.42 -0.53 16 30 H 0.40 -1.05 6.76 -40.82 -0.28 -1.33 16 31 H 0.40 0.46 9.06 45.56 0.41 0.88 16 32 H 0.08 0.00 7.83 -51.93 -0.41 -0.41 16 33 H 0.38 -1.09 8.74 45.56 0.40 -0.69 16 34 H -0.25 -0.29 6.75 56.52 0.38 0.09 16 35 H -0.26 -0.24 7.11 56.52 0.40 0.16 16 36 H 0.14 -0.17 4.87 -52.49 -0.26 -0.42 16 37 H 0.07 -0.23 8.14 -51.93 -0.42 -0.65 16 38 H 0.07 -0.25 8.08 -51.93 -0.42 -0.67 16 39 H 0.07 -0.27 8.08 -51.93 -0.42 -0.69 16 40 H 0.13 -0.44 6.40 -52.49 -0.34 -0.77 16 41 H 0.09 -0.21 8.14 -51.93 -0.42 -0.63 16 42 H 0.10 -0.11 7.42 -51.93 -0.39 -0.50 16 LS Contribution 356.36 15.07 5.37 5.37 Total: 0.00 -10.11 356.36 -8.67 -18.78 By element: Atomic # 1 Polarization: -4.86 SS G_CDS: -4.67 Total: -9.53 kcal Atomic # 6 Polarization: 3.05 SS G_CDS: -2.10 Total: 0.95 kcal Atomic # 7 Polarization: 0.27 SS G_CDS: -0.29 Total: -0.01 kcal Atomic # 8 Polarization: -7.82 SS G_CDS: -1.85 Total: -9.67 kcal Atomic # 14 Polarization: -0.77 SS G_CDS: -5.13 Total: -5.90 kcal Total LS contribution 5.37 Total: 5.37 kcal Total: -10.11 -8.67 -18.78 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10970304_13422088.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -116.564 kcal (2) G-P(sol) polarization free energy of solvation -10.112 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -126.676 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.666 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.778 kcal (6) G-S(sol) free energy of system = (1) + (5) -135.342 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.75 seconds