Wall clock time and date at job start Sat Mar 6 2021 15:35:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45200 * 1 3 3 C 1.34225 * 117.00277 * 2 1 4 4 O 1.20829 * 119.99764 * 0.02562 * 3 2 1 5 5 C 1.50697 * 120.00007 * 179.97438 * 3 2 1 6 6 H 1.09006 * 112.84810 * 48.81084 * 5 3 2 7 7 C 1.53779 * 113.61656 * 180.02562 * 5 3 2 8 8 C 1.53775 * 87.08196 * 139.98387 * 7 5 3 9 9 H 1.09000 * 113.61801 * 89.20384 * 8 7 5 10 10 N 1.46501 * 113.61390 * 220.01818 * 8 7 5 11 11 C 1.34777 * 120.00083 * 203.47119 * 10 8 7 12 12 O 1.21588 * 120.00034 * 0.02562 * 11 10 8 13 13 C 1.47526 * 119.99745 * 180.02562 * 11 10 8 14 14 C 1.39785 * 120.06297 * 179.97438 * 13 11 10 15 15 C 1.37629 * 119.92237 * 179.74858 * 14 13 11 16 16 C 1.50703 * 119.96047 * 180.30032 * 15 14 13 17 17 O 1.42906 * 109.46846 * 255.24914 * 16 15 14 18 18 Si 1.86295 * 109.47478 * 15.24831 * 16 15 14 19 19 C 1.39189 * 120.07188 * 0.54758 * 15 14 13 20 20 N 1.39055 * 119.93336 * 179.72623 * 19 15 14 21 21 C 1.46901 * 110.99854 * 239.73141 * 20 19 15 22 22 C 1.46898 * 110.99970 * 115.77306 * 20 19 15 23 23 C 1.39243 * 120.14102 * 359.45360 * 19 15 14 24 24 C 1.37595 * 120.06584 * 0.27144 * 23 19 15 25 25 C 1.53772 * 87.17479 * 334.60888 * 8 7 5 26 26 H 1.09001 * 109.47238 * 59.99450 * 1 2 3 27 27 H 1.09001 * 109.47551 * 179.97438 * 1 2 3 28 28 H 1.09004 * 109.46875 * 299.99516 * 1 2 3 29 29 H 1.09008 * 113.61169 * 25.43184 * 7 5 3 30 30 H 1.09002 * 113.69005 * 254.54640 * 7 5 3 31 31 H 0.97002 * 120.00202 * 23.47544 * 10 8 7 32 32 H 1.07995 * 120.03745 * 0.03007 * 14 13 11 33 33 H 1.09001 * 109.47495 * 135.25396 * 16 15 14 34 34 H 0.96705 * 113.99292 * 59.99910 * 17 16 15 35 35 H 1.48507 * 109.99776 * 58.68573 * 18 16 15 36 36 H 1.48502 * 110.00176 * 180.02562 * 18 16 15 37 37 H 1.09002 * 109.47401 * 59.99571 * 21 20 19 38 38 H 1.09001 * 109.46874 * 299.99584 * 21 20 19 39 39 H 1.09004 * 109.46970 * 179.97438 * 21 20 19 40 40 H 1.09006 * 109.46770 * 179.97438 * 22 20 19 41 41 H 1.09001 * 109.47456 * 300.00115 * 22 20 19 42 42 H 1.09000 * 109.46814 * 60.00421 * 22 20 19 43 43 H 1.07996 * 119.96755 * 180.24740 * 23 19 15 44 44 H 1.07995 * 120.03181 * 180.02562 * 24 23 19 45 45 H 1.09007 * 113.61616 * 139.93785 * 25 8 7 46 46 H 1.08996 * 113.62102 * 270.84225 * 25 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2747 0.0006 6 1 4.0239 0.6361 -0.7551 7 6 4.1079 2.7140 0.0011 8 6 5.1808 2.2263 0.9889 9 1 6.0813 1.8491 0.5043 10 7 5.4695 3.1823 2.0608 11 6 6.6558 3.1408 2.6993 12 8 7.4864 2.3102 2.3854 13 6 6.9463 4.1031 3.7791 14 6 8.1759 4.0609 4.4426 15 6 8.4459 4.9634 5.4460 16 6 9.7739 4.9231 6.1572 17 8 9.6023 4.3483 7.4543 18 14 10.9737 3.8910 5.1745 19 6 7.4918 5.9100 5.8080 20 7 7.7654 6.8167 6.8261 21 6 6.7952 6.6870 7.9214 22 6 7.7976 8.1922 6.3113 23 6 6.2659 5.9545 5.1490 24 6 5.9921 5.0586 4.1412 25 6 4.1928 1.1215 1.3986 26 1 -0.3634 0.5139 -0.8899 27 1 -0.3634 -1.0276 -0.0005 28 1 -0.3633 0.5138 0.8901 29 1 3.4172 3.4402 0.4300 30 1 4.5114 3.0305 -0.9607 31 1 4.8070 3.8451 2.3111 32 1 8.9149 3.3240 4.1650 33 1 10.1634 5.9362 6.2575 34 1 9.2577 3.4448 7.4415 35 1 11.1366 4.4603 3.8126 36 1 12.2872 3.8428 5.8657 37 1 6.8417 5.6777 8.3304 38 1 5.7915 6.8795 7.5424 39 1 7.0327 7.4073 8.7043 40 1 8.0131 8.8809 7.1283 41 1 8.5729 8.2772 5.5499 42 1 6.8302 8.4392 5.8741 43 1 5.5292 6.6927 5.4295 44 1 5.0414 5.0939 3.6302 45 1 4.6646 0.1526 1.5628 46 1 3.5254 1.4113 2.2101 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10970304_13422196.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:35:40 Heat of formation + Delta-G solvation = -75.745631 kcal Electronic energy + Delta-G solvation = -28813.148036 eV Core-core repulsion = 24671.116973 eV Total energy + Delta-G solvation = -4142.031062 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 335.161 amu Computer time = 0.92 seconds Orbital eigenvalues (eV) -42.06036 -41.58396 -40.57217 -39.17876 -37.79367 -37.36258 -37.15162 -34.74835 -32.73391 -31.35236 -29.42174 -28.64542 -27.28704 -26.97865 -26.89433 -25.81307 -23.50741 -22.89826 -22.29895 -21.36082 -20.72971 -19.13973 -18.85552 -18.03453 -17.80850 -17.67308 -17.42608 -16.92756 -16.57676 -16.36134 -16.18223 -15.99734 -15.83452 -15.51737 -15.29281 -14.90698 -14.78214 -14.48876 -14.29165 -14.15884 -13.91976 -13.78319 -13.67553 -13.51939 -13.16025 -13.12112 -12.99104 -12.73223 -12.63853 -12.57798 -12.40143 -12.06178 -11.91435 -11.90308 -11.82181 -11.40596 -10.97898 -10.31283 -10.22386 -10.14062 -9.81513 -9.57491 -4.91704 -0.39321 0.11368 1.11025 1.37397 1.59441 1.66535 1.75062 2.06368 2.08186 2.61759 2.72611 3.12146 3.19484 3.45866 3.52166 3.58700 3.63312 3.64028 3.76994 3.93291 3.95940 4.06718 4.12863 4.19374 4.20261 4.24552 4.34360 4.39148 4.43228 4.46553 4.49371 4.50942 4.56090 4.61770 4.67611 4.75299 4.76358 4.82477 4.90881 4.95321 5.00393 5.08157 5.22364 5.32755 5.37733 5.52158 5.75189 6.23196 6.35259 6.68925 6.70600 7.09927 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.356 6.356 3 C 0.472 3.528 4 O -0.506 6.506 5 C -0.109 4.109 6 H 0.133 0.867 7 C -0.127 4.127 8 C 0.126 3.874 9 H 0.126 0.874 10 N -0.717 5.717 11 C 0.563 3.437 12 O -0.529 6.529 13 C -0.138 4.138 14 C -0.047 4.047 15 C -0.108 4.108 16 C -0.044 4.044 17 O -0.529 6.529 18 Si 0.667 3.333 19 C 0.144 3.856 20 N -0.508 5.508 21 C 0.031 3.969 22 C 0.025 3.975 23 C -0.158 4.158 24 C -0.069 4.069 25 C -0.133 4.133 26 H 0.064 0.936 27 H 0.104 0.896 28 H 0.063 0.937 29 H 0.102 0.898 30 H 0.090 0.910 31 H 0.402 0.598 32 H 0.146 0.854 33 H 0.118 0.882 34 H 0.373 0.627 35 H -0.256 1.256 36 H -0.251 1.251 37 H 0.075 0.925 38 H 0.030 0.970 39 H 0.076 0.924 40 H 0.078 0.922 41 H 0.070 0.930 42 H 0.033 0.967 43 H 0.129 0.871 44 H 0.128 0.872 45 H 0.092 0.908 46 H 0.091 0.909 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.886 -0.632 -0.020 3.938 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.272 6.272 3 C 0.315 3.685 4 O -0.393 6.393 5 C -0.129 4.129 6 H 0.150 0.850 7 C -0.165 4.165 8 C 0.021 3.979 9 H 0.144 0.856 10 N -0.368 5.368 11 C 0.351 3.649 12 O -0.406 6.406 13 C -0.141 4.141 14 C -0.066 4.066 15 C -0.109 4.109 16 C -0.155 4.155 17 O -0.333 6.333 18 Si 0.568 3.432 19 C 0.050 3.950 20 N -0.229 5.229 21 C -0.115 4.115 22 C -0.122 4.122 23 C -0.179 4.179 24 C -0.088 4.088 25 C -0.172 4.172 26 H 0.083 0.917 27 H 0.122 0.878 28 H 0.082 0.918 29 H 0.121 0.879 30 H 0.108 0.892 31 H 0.238 0.762 32 H 0.163 0.837 33 H 0.136 0.864 34 H 0.219 0.781 35 H -0.181 1.181 36 H -0.176 1.176 37 H 0.094 0.906 38 H 0.049 0.951 39 H 0.094 0.906 40 H 0.096 0.904 41 H 0.089 0.911 42 H 0.051 0.949 43 H 0.147 0.853 44 H 0.146 0.854 45 H 0.110 0.890 46 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges -2.046 -0.451 -0.290 2.116 hybrid contribution -1.900 1.201 -0.197 2.256 sum -3.946 0.750 -0.487 4.046 Atomic orbital electron populations 1.23329 0.75900 1.04062 1.02690 1.86521 1.23740 1.33243 1.83728 1.23474 0.91578 0.81434 0.72027 1.90683 1.67001 1.36454 1.45180 1.22341 0.87703 1.00940 1.01891 0.84957 1.23378 0.97124 0.94988 1.01026 1.22463 0.97935 0.89518 0.87959 0.85582 1.45859 1.17537 1.36221 1.37190 1.18185 0.81646 0.83569 0.81523 1.90812 1.46462 1.37807 1.65517 1.19839 0.96108 0.98770 0.99384 1.21050 0.95623 0.96753 0.93152 1.20310 0.97527 0.95788 0.97294 1.24834 0.97488 1.03873 0.89344 1.86571 1.87929 1.33127 1.25651 0.95054 0.79951 0.89740 0.78416 1.18834 0.91739 0.93009 0.91467 1.59407 1.50801 1.04332 1.08355 1.22448 0.92217 1.03693 0.93150 1.22512 1.00935 0.87788 1.00934 1.21659 0.97992 1.00516 0.97690 1.21162 0.98174 0.93484 0.95995 1.23487 0.97918 1.01284 0.94532 0.91719 0.87799 0.91779 0.87935 0.89163 0.76188 0.83734 0.86419 0.78061 1.18074 1.17552 0.90608 0.95139 0.90554 0.90356 0.91104 0.94881 0.85274 0.85404 0.88965 0.89025 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 101.05 1.07 1.03 16 2 O -0.36 -0.32 10.56 -39.24 -0.41 -0.73 16 3 C 0.47 0.49 7.49 36.00 0.27 0.76 16 4 O -0.51 -1.87 15.65 -18.75 -0.29 -2.16 16 5 C -0.11 0.20 4.26 -90.87 -0.39 -0.18 16 6 H 0.13 -0.47 8.14 -51.93 -0.42 -0.89 16 7 C -0.13 0.29 7.15 -25.92 -0.19 0.10 16 8 C 0.13 -0.22 4.21 -67.13 -0.28 -0.51 16 9 H 0.13 -0.13 7.50 -51.93 -0.39 -0.52 16 10 N -0.72 1.03 5.31 -54.07 -0.29 0.75 16 11 C 0.56 0.67 7.76 -12.47 -0.10 0.58 16 12 O -0.53 -2.31 15.95 5.29 0.08 -2.23 16 13 C -0.14 -0.04 5.88 -104.95 -0.62 -0.66 16 14 C -0.05 -0.03 8.19 -39.23 -0.32 -0.35 16 15 C -0.11 -0.08 5.27 -104.49 -0.55 -0.63 16 16 C -0.04 -0.03 2.33 36.01 0.08 0.05 16 17 O -0.53 -0.50 12.88 -35.23 -0.45 -0.95 16 18 Si 0.67 0.34 29.92 -169.99 -5.09 -4.75 16 19 C 0.14 0.08 4.70 -83.86 -0.39 -0.32 16 20 N -0.51 -0.24 4.20 -186.85 -0.78 -1.03 16 21 C 0.03 -0.02 9.34 60.07 0.56 0.54 16 22 C 0.02 -0.02 9.38 60.06 0.56 0.54 16 23 C -0.16 0.12 8.53 -39.44 -0.34 -0.21 16 24 C -0.07 0.10 9.53 -39.23 -0.37 -0.28 16 25 C -0.13 0.27 7.44 -25.83 -0.19 0.08 16 26 H 0.06 -0.06 8.13 -51.93 -0.42 -0.48 16 27 H 0.10 -0.34 8.14 -51.93 -0.42 -0.76 16 28 H 0.06 -0.06 8.13 -51.93 -0.42 -0.49 16 29 H 0.10 -0.17 7.40 -51.92 -0.38 -0.55 16 30 H 0.09 -0.26 8.14 -51.93 -0.42 -0.69 16 31 H 0.40 -1.42 6.73 -40.82 -0.27 -1.70 16 32 H 0.15 0.03 4.70 -52.49 -0.25 -0.21 16 33 H 0.12 0.22 7.78 -51.93 -0.40 -0.19 16 34 H 0.37 -1.04 8.70 45.56 0.40 -0.64 16 35 H -0.26 -0.82 7.11 56.52 0.40 -0.42 16 36 H -0.25 -0.85 7.11 56.52 0.40 -0.45 16 37 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 38 H 0.03 -0.04 7.10 -51.93 -0.37 -0.41 16 39 H 0.08 -0.09 8.12 -51.93 -0.42 -0.51 16 40 H 0.08 -0.11 8.12 -51.93 -0.42 -0.54 16 41 H 0.07 -0.03 8.14 -51.93 -0.42 -0.46 16 42 H 0.03 -0.05 7.32 -51.93 -0.38 -0.43 16 43 H 0.13 -0.26 6.99 -52.49 -0.37 -0.63 16 44 H 0.13 -0.51 6.39 -52.49 -0.34 -0.85 16 45 H 0.09 -0.20 8.14 -51.92 -0.42 -0.63 16 46 H 0.09 -0.16 8.10 -51.93 -0.42 -0.58 16 LS Contribution 380.77 15.07 5.74 5.74 Total: 0.00 -8.98 380.77 -9.29 -18.26 By element: Atomic # 1 Polarization: -6.85 SS G_CDS: -6.60 Total: -13.45 kcal Atomic # 6 Polarization: 1.74 SS G_CDS: -1.19 Total: 0.55 kcal Atomic # 7 Polarization: 0.79 SS G_CDS: -1.07 Total: -0.28 kcal Atomic # 8 Polarization: -4.99 SS G_CDS: -1.08 Total: -6.07 kcal Atomic # 14 Polarization: 0.34 SS G_CDS: -5.09 Total: -4.75 kcal Total LS contribution 5.74 Total: 5.74 kcal Total: -8.98 -9.29 -18.26 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10970304_13422196.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -57.483 kcal (2) G-P(sol) polarization free energy of solvation -8.977 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -66.459 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.286 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.263 kcal (6) G-S(sol) free energy of system = (1) + (5) -75.746 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.92 seconds