Wall clock time and date at job start Sat Mar 6 2021 15:35:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45200 * 1 3 3 C 1.34225 * 117.00277 * 2 1 4 4 O 1.20829 * 119.99764 * 0.02562 * 3 2 1 5 5 C 1.50697 * 120.00007 * 179.97438 * 3 2 1 6 6 H 1.09006 * 112.84810 * 48.81084 * 5 3 2 7 7 C 1.53779 * 113.61656 * 180.02562 * 5 3 2 8 8 C 1.53775 * 87.08196 * 139.98387 * 7 5 3 9 9 H 1.09000 * 113.61801 * 89.20384 * 8 7 5 10 10 N 1.46501 * 113.61390 * 220.01818 * 8 7 5 11 11 C 1.34777 * 120.00083 * 203.47119 * 10 8 7 12 12 O 1.21588 * 120.00034 * 0.02562 * 11 10 8 13 13 C 1.47526 * 119.99745 * 180.02562 * 11 10 8 14 14 C 1.39785 * 120.06297 * 179.97438 * 13 11 10 15 15 C 1.37629 * 119.92237 * 179.74858 * 14 13 11 16 16 C 1.50703 * 119.96047 * 180.30032 * 15 14 13 17 17 O 1.42906 * 109.46846 * 255.24914 * 16 15 14 18 18 Si 1.86295 * 109.47478 * 15.24831 * 16 15 14 19 19 C 1.39189 * 120.07188 * 0.54758 * 15 14 13 20 20 N 1.39055 * 119.93336 * 179.72623 * 19 15 14 21 21 C 1.46901 * 110.99854 * 239.73141 * 20 19 15 22 22 C 1.46898 * 110.99970 * 115.77306 * 20 19 15 23 23 C 1.39243 * 120.14102 * 359.45360 * 19 15 14 24 24 C 1.37595 * 120.06584 * 0.27144 * 23 19 15 25 25 C 1.53772 * 87.17479 * 334.60888 * 8 7 5 26 26 H 1.09001 * 109.47238 * 59.99450 * 1 2 3 27 27 H 1.09001 * 109.47551 * 179.97438 * 1 2 3 28 28 H 1.09004 * 109.46875 * 299.99516 * 1 2 3 29 29 H 1.09008 * 113.61169 * 25.43184 * 7 5 3 30 30 H 1.09002 * 113.69005 * 254.54640 * 7 5 3 31 31 H 0.97002 * 120.00202 * 23.47544 * 10 8 7 32 32 H 1.07995 * 120.03745 * 0.03007 * 14 13 11 33 33 H 1.09001 * 109.47495 * 135.25396 * 16 15 14 34 34 H 0.96705 * 113.99292 * 59.99910 * 17 16 15 35 35 H 1.48507 * 109.99776 * 58.68573 * 18 16 15 36 36 H 1.48502 * 110.00176 * 180.02562 * 18 16 15 37 37 H 1.09002 * 109.47401 * 59.99571 * 21 20 19 38 38 H 1.09001 * 109.46874 * 299.99584 * 21 20 19 39 39 H 1.09004 * 109.46970 * 179.97438 * 21 20 19 40 40 H 1.09006 * 109.46770 * 179.97438 * 22 20 19 41 41 H 1.09001 * 109.47456 * 300.00115 * 22 20 19 42 42 H 1.09000 * 109.46814 * 60.00421 * 22 20 19 43 43 H 1.07996 * 119.96755 * 180.24740 * 23 19 15 44 44 H 1.07995 * 120.03181 * 180.02562 * 24 23 19 45 45 H 1.09007 * 113.61616 * 139.93785 * 25 8 7 46 46 H 1.08996 * 113.62102 * 270.84225 * 25 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2747 0.0006 6 1 4.0239 0.6361 -0.7551 7 6 4.1079 2.7140 0.0011 8 6 5.1808 2.2263 0.9889 9 1 6.0813 1.8491 0.5043 10 7 5.4695 3.1823 2.0608 11 6 6.6558 3.1408 2.6993 12 8 7.4864 2.3102 2.3854 13 6 6.9463 4.1031 3.7791 14 6 8.1759 4.0609 4.4426 15 6 8.4459 4.9634 5.4460 16 6 9.7739 4.9231 6.1572 17 8 9.6023 4.3483 7.4543 18 14 10.9737 3.8910 5.1745 19 6 7.4918 5.9100 5.8080 20 7 7.7654 6.8167 6.8261 21 6 6.7952 6.6870 7.9214 22 6 7.7976 8.1922 6.3113 23 6 6.2659 5.9545 5.1490 24 6 5.9921 5.0586 4.1412 25 6 4.1928 1.1215 1.3986 26 1 -0.3634 0.5139 -0.8899 27 1 -0.3634 -1.0276 -0.0005 28 1 -0.3633 0.5138 0.8901 29 1 3.4172 3.4402 0.4300 30 1 4.5114 3.0305 -0.9607 31 1 4.8070 3.8451 2.3111 32 1 8.9149 3.3240 4.1650 33 1 10.1634 5.9362 6.2575 34 1 9.2577 3.4448 7.4415 35 1 11.1366 4.4603 3.8126 36 1 12.2872 3.8428 5.8657 37 1 6.8417 5.6777 8.3304 38 1 5.7915 6.8795 7.5424 39 1 7.0327 7.4073 8.7043 40 1 8.0131 8.8809 7.1283 41 1 8.5729 8.2772 5.5499 42 1 6.8302 8.4392 5.8741 43 1 5.5292 6.6927 5.4295 44 1 5.0414 5.0939 3.6302 45 1 4.6646 0.1526 1.5628 46 1 3.5254 1.4113 2.2101 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10970304_13422196.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:35:39 Heat of formation + Delta-G solvation = -75.527024 kcal Electronic energy + Delta-G solvation = -28813.138556 eV Core-core repulsion = 24671.116973 eV Total energy + Delta-G solvation = -4142.021583 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 335.161 amu Computer time = 1.08 seconds Orbital eigenvalues (eV) -42.04904 -41.58408 -40.57862 -39.15002 -37.81282 -37.43874 -37.16765 -34.75234 -32.71136 -31.31805 -29.36602 -28.56024 -27.22798 -26.90217 -26.81385 -25.77487 -23.48314 -22.87787 -22.27481 -21.33283 -20.67314 -19.10464 -18.85619 -18.06394 -17.81508 -17.63697 -17.43949 -16.92949 -16.53287 -16.33866 -16.15954 -15.97545 -15.83424 -15.52717 -15.28380 -14.92918 -14.72661 -14.47450 -14.30036 -14.17740 -13.99314 -13.68720 -13.55473 -13.44386 -13.09948 -13.04797 -12.94196 -12.66823 -12.55823 -12.50826 -12.32620 -12.23211 -12.03084 -11.84833 -11.79317 -11.42106 -11.06267 -10.38736 -10.20986 -10.10234 -9.77881 -9.51098 -5.01774 -0.38260 0.15734 1.06568 1.28469 1.57696 1.65356 1.67419 1.91078 2.13736 2.63343 2.78838 3.25454 3.33011 3.50857 3.60317 3.68079 3.68898 3.77218 3.82951 4.03210 4.04393 4.14787 4.24393 4.26264 4.28755 4.34684 4.43333 4.48772 4.52540 4.57877 4.59450 4.64871 4.65766 4.69052 4.78325 4.85808 4.91555 4.94501 4.98616 5.02233 5.08237 5.13576 5.26291 5.33845 5.45875 5.56654 5.83608 6.28140 6.43021 6.65311 6.83134 7.10501 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.364 6.364 3 C 0.471 3.529 4 O -0.537 6.537 5 C -0.106 4.106 6 H 0.152 0.848 7 C -0.120 4.120 8 C 0.125 3.875 9 H 0.120 0.880 10 N -0.704 5.704 11 C 0.562 3.438 12 O -0.567 6.567 13 C -0.148 4.148 14 C -0.055 4.055 15 C -0.117 4.117 16 C -0.039 4.039 17 O -0.542 6.542 18 Si 0.740 3.260 19 C 0.136 3.864 20 N -0.524 5.524 21 C 0.033 3.967 22 C 0.025 3.975 23 C -0.159 4.159 24 C -0.058 4.058 25 C -0.128 4.128 26 H 0.061 0.939 27 H 0.127 0.873 28 H 0.061 0.939 29 H 0.098 0.902 30 H 0.099 0.901 31 H 0.413 0.587 32 H 0.143 0.857 33 H 0.106 0.894 34 H 0.389 0.611 35 H -0.294 1.294 36 H -0.290 1.290 37 H 0.067 0.933 38 H 0.041 0.959 39 H 0.079 0.921 40 H 0.083 0.917 41 H 0.063 0.937 42 H 0.042 0.958 43 H 0.146 0.854 44 H 0.157 0.843 45 H 0.095 0.905 46 H 0.090 0.910 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.237 -0.546 -0.104 5.267 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.280 6.280 3 C 0.316 3.684 4 O -0.427 6.427 5 C -0.125 4.125 6 H 0.169 0.831 7 C -0.158 4.158 8 C 0.020 3.980 9 H 0.138 0.862 10 N -0.356 5.356 11 C 0.351 3.649 12 O -0.447 6.447 13 C -0.151 4.151 14 C -0.074 4.074 15 C -0.118 4.118 16 C -0.150 4.150 17 O -0.349 6.349 18 Si 0.646 3.354 19 C 0.042 3.958 20 N -0.245 5.245 21 C -0.113 4.113 22 C -0.121 4.121 23 C -0.178 4.178 24 C -0.077 4.077 25 C -0.167 4.167 26 H 0.080 0.920 27 H 0.145 0.855 28 H 0.080 0.920 29 H 0.117 0.883 30 H 0.118 0.882 31 H 0.252 0.748 32 H 0.161 0.839 33 H 0.123 0.877 34 H 0.238 0.762 35 H -0.221 1.221 36 H -0.218 1.218 37 H 0.086 0.914 38 H 0.059 0.941 39 H 0.098 0.902 40 H 0.102 0.898 41 H 0.082 0.918 42 H 0.061 0.939 43 H 0.163 0.837 44 H 0.174 0.826 45 H 0.113 0.887 46 H 0.108 0.892 Dipole moment (debyes) X Y Z Total from point charges -3.450 -0.376 -0.366 3.490 hybrid contribution -1.506 1.175 -0.176 1.919 sum -4.956 0.800 -0.542 5.049 Atomic orbital electron populations 1.23520 0.75082 1.05560 1.02446 1.86524 1.24723 1.33252 1.83457 1.24000 0.92523 0.80984 0.70922 1.90665 1.67892 1.37347 1.46790 1.22469 0.85881 1.01652 1.02537 0.83065 1.23334 0.96526 0.94691 1.01236 1.22458 0.97818 0.89685 0.87992 0.86237 1.45787 1.16955 1.36199 1.36612 1.18335 0.81812 0.83201 0.81587 1.90791 1.47764 1.39414 1.66778 1.19869 0.96486 0.99318 0.99447 1.21089 0.96065 0.96877 0.93387 1.20263 0.97558 0.96378 0.97639 1.24731 0.97845 1.03115 0.89358 1.86524 1.88123 1.34531 1.25687 0.94202 0.77477 0.88690 0.74983 1.18987 0.92235 0.92931 0.91675 1.59384 1.51531 1.04836 1.08739 1.22438 0.92571 1.03335 0.92976 1.22523 1.01238 0.87344 1.01012 1.21832 0.97733 1.00833 0.97449 1.21425 0.98712 0.92164 0.95401 1.23452 0.97572 1.01298 0.94383 0.92030 0.85500 0.91995 0.88347 0.88237 0.74838 0.83941 0.87679 0.76218 1.22080 1.21752 0.91398 0.94055 0.90206 0.89821 0.91787 0.93905 0.83656 0.82568 0.88666 0.89165 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.06 10.56 113.37 1.20 1.14 16 2 O -0.36 -0.55 10.56 -51.37 -0.54 -1.09 16 3 C 0.47 0.89 7.49 71.23 0.53 1.43 16 4 O -0.54 -4.08 15.65 21.95 0.34 -3.74 16 5 C -0.11 0.47 4.26 -10.96 -0.05 0.42 16 6 H 0.15 -1.25 8.14 -2.38 -0.02 -1.27 16 7 C -0.12 0.64 7.15 31.12 0.22 0.86 16 8 C 0.13 -0.50 4.21 45.51 0.19 -0.31 16 9 H 0.12 -0.24 7.50 -2.39 -0.02 -0.26 16 10 N -0.70 2.48 5.31 -443.23 -2.35 0.12 16 11 C 0.56 1.37 7.76 86.69 0.67 2.04 16 12 O -0.57 -5.43 15.95 -3.99 -0.06 -5.50 16 13 C -0.15 -0.07 5.88 -20.07 -0.12 -0.19 16 14 C -0.06 -0.11 8.19 22.50 0.18 0.08 16 15 C -0.12 -0.23 5.27 -19.78 -0.10 -0.33 16 16 C -0.04 -0.10 2.33 71.24 0.17 0.06 16 17 O -0.54 -1.32 12.88 -148.98 -1.92 -3.24 16 18 Si 0.74 1.93 29.92 68.60 2.05 3.99 16 19 C 0.14 0.12 4.70 38.47 0.18 0.30 16 20 N -0.52 -0.44 4.20 -745.08 -3.13 -3.57 16 21 C 0.03 -0.06 9.34 127.69 1.19 1.13 16 22 C 0.02 -0.05 9.38 127.69 1.20 1.15 16 23 C -0.16 0.45 8.53 22.36 0.19 0.64 16 24 C -0.06 0.24 9.53 22.50 0.21 0.45 16 25 C -0.13 0.60 7.44 31.18 0.23 0.83 16 26 H 0.06 -0.10 8.13 -2.39 -0.02 -0.12 16 27 H 0.13 -0.94 8.14 -2.39 -0.02 -0.96 16 28 H 0.06 -0.11 8.13 -2.39 -0.02 -0.13 16 29 H 0.10 -0.39 7.40 -2.38 -0.02 -0.41 16 30 H 0.10 -0.68 8.14 -2.39 -0.02 -0.70 16 31 H 0.41 -3.48 6.73 -92.71 -0.62 -4.11 16 32 H 0.14 0.24 4.70 -2.91 -0.01 0.23 16 33 H 0.11 0.54 7.78 -2.39 -0.02 0.52 16 34 H 0.39 -2.05 8.70 -74.05 -0.64 -2.70 16 35 H -0.29 -2.56 7.11 99.48 0.71 -1.85 16 36 H -0.29 -2.60 7.11 99.48 0.71 -1.89 16 37 H 0.07 -0.02 8.14 -2.39 -0.02 -0.04 16 38 H 0.04 -0.17 7.10 -2.39 -0.02 -0.19 16 39 H 0.08 -0.22 8.12 -2.38 -0.02 -0.24 16 40 H 0.08 -0.27 8.12 -2.38 -0.02 -0.29 16 41 H 0.06 -0.04 8.14 -2.39 -0.02 -0.06 16 42 H 0.04 -0.17 7.32 -2.39 -0.02 -0.19 16 43 H 0.15 -0.90 6.99 -2.91 -0.02 -0.92 16 44 H 0.16 -1.63 6.39 -2.91 -0.02 -1.65 16 45 H 0.09 -0.47 8.14 -2.38 -0.02 -0.49 16 46 H 0.09 -0.37 8.10 -2.39 -0.02 -0.39 16 Total: 0.00 -21.70 380.77 0.28 -21.41 By element: Atomic # 1 Polarization: -17.87 SS G_CDS: -0.21 Total: -18.08 kcal Atomic # 6 Polarization: 3.59 SS G_CDS: 6.11 Total: 9.70 kcal Atomic # 7 Polarization: 2.04 SS G_CDS: -5.48 Total: -3.45 kcal Atomic # 8 Polarization: -11.39 SS G_CDS: -2.18 Total: -13.57 kcal Atomic # 14 Polarization: 1.93 SS G_CDS: 2.05 Total: 3.99 kcal Total: -21.70 0.28 -21.41 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10970304_13422196.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -54.116 kcal (2) G-P(sol) polarization free energy of solvation -21.696 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -75.811 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.284 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.411 kcal (6) G-S(sol) free energy of system = (1) + (5) -75.527 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.08 seconds