Wall clock time and date at job start Sat Mar 6 2021 15:35:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45199 * 1 3 3 C 1.34232 * 116.99330 * 2 1 4 4 O 1.20823 * 120.00389 * 0.02562 * 3 2 1 5 5 C 1.50699 * 119.99567 * 179.97438 * 3 2 1 6 6 H 1.09002 * 112.90791 * 311.25185 * 5 3 2 7 7 C 1.53779 * 113.61429 * 82.50513 * 5 3 2 8 8 C 1.53779 * 87.08402 * 139.98140 * 7 5 3 9 9 H 1.08998 * 113.69354 * 89.12517 * 8 7 5 10 10 N 1.46501 * 113.61719 * 220.02087 * 8 7 5 11 11 C 1.34772 * 120.00042 * 252.49461 * 10 8 7 12 12 O 1.21691 * 119.99956 * 0.02562 * 11 10 8 13 13 C 1.46675 * 120.00161 * 179.97438 * 11 10 8 14 14 C 1.37868 * 126.23669 * 179.97438 * 13 11 10 15 15 C 1.50706 * 126.45667 * 359.93510 * 14 13 11 16 16 C 1.39838 * 107.08745 * 179.97438 * 14 13 11 17 17 C 1.35451 * 107.86290 * 0.02562 * 16 14 13 18 18 C 1.50696 * 125.56196 * 180.02562 * 17 16 14 19 19 O 1.42897 * 109.47637 * 244.97952 * 18 17 16 20 20 Si 1.86308 * 109.47387 * 4.97656 * 18 17 16 21 21 N 1.35530 * 108.87235 * 359.76948 * 17 16 14 22 22 C 1.53784 * 113.61308 * 180.02562 * 5 3 2 23 23 H 1.08995 * 109.47577 * 299.99697 * 1 2 3 24 24 H 1.08999 * 109.47611 * 59.99846 * 1 2 3 25 25 H 1.09008 * 109.47278 * 179.97438 * 1 2 3 26 26 H 1.09006 * 113.61307 * 25.43343 * 7 5 3 27 27 H 1.09007 * 113.61642 * 254.53100 * 7 5 3 28 28 H 0.97005 * 120.00129 * 72.49260 * 10 8 7 29 29 H 1.08998 * 109.47069 * 89.99911 * 15 14 13 30 30 H 1.09003 * 109.47092 * 209.99850 * 15 14 13 31 31 H 1.08998 * 109.46766 * 329.99893 * 15 14 13 32 32 H 1.08002 * 126.06391 * 180.02562 * 16 14 13 33 33 H 1.09003 * 109.47185 * 124.97213 * 18 17 16 34 34 H 0.96695 * 113.99985 * 59.99561 * 19 18 17 35 35 H 1.48510 * 109.99643 * 58.67832 * 20 18 17 36 36 H 1.48497 * 110.00180 * 179.97438 * 20 18 17 37 37 H 0.96997 * 125.67629 * 180.26554 * 21 17 16 38 38 H 1.09004 * 113.61451 * 105.47354 * 22 5 3 39 39 H 1.08994 * 113.61477 * 334.56656 * 22 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1961 0.0000 4 8 1.4032 2.2094 0.0005 5 6 3.5662 1.2750 0.0006 6 1 4.0243 0.6363 0.7558 7 6 4.1915 1.1235 -1.3961 8 6 5.1813 2.2269 -0.9866 9 1 6.0815 1.8497 -0.5013 10 7 5.4707 3.1830 -2.0582 11 6 6.6689 3.1616 -2.6748 12 8 7.5102 2.3479 -2.3418 13 6 6.9585 4.1185 -3.7481 14 6 8.1344 4.2113 -4.4618 15 6 9.3596 3.3519 -4.2847 16 6 7.9763 5.2537 -5.3804 17 6 6.7344 5.7685 -5.2151 18 6 6.1473 6.9112 -6.0028 19 8 5.9151 8.0203 -5.1322 20 14 7.3356 7.4146 -7.3464 21 7 6.1040 5.0844 -4.2295 22 6 4.1075 2.7144 0.0011 23 1 -0.3634 0.5137 0.8899 24 1 -0.3634 0.5138 -0.8899 25 1 -0.3634 -1.0277 -0.0005 26 1 3.5241 1.4147 -2.2073 27 1 4.6620 0.1541 -1.5611 28 1 4.7999 3.8314 -2.3239 29 1 9.2879 2.4789 -4.9334 30 1 10.2478 3.9270 -4.5465 31 1 9.4293 3.0282 -3.2463 32 1 8.7137 5.5888 -6.0949 33 1 5.2044 6.5972 -6.4506 34 1 6.7124 8.3530 -4.6980 35 1 7.6101 6.2608 -8.2402 36 1 6.7679 8.5404 -8.1309 37 1 5.2013 5.2489 -3.9148 38 1 4.5103 3.0291 0.9639 39 1 3.4172 3.4407 -0.4278 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10970304_13940406.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:35:51 Heat of formation + Delta-G solvation = -82.845292 kcal Electronic energy + Delta-G solvation = -23463.673082 eV Core-core repulsion = 19760.635534 eV Total energy + Delta-G solvation = -3703.037548 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 295.130 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -42.62156 -41.93867 -40.53183 -39.04065 -37.79768 -37.35945 -34.85478 -33.39610 -31.66963 -29.47871 -28.17932 -27.56181 -26.99944 -26.22090 -23.23309 -22.08615 -21.53711 -21.14831 -20.21428 -19.46560 -18.97679 -18.11211 -17.98078 -17.43848 -16.88731 -16.58712 -16.36593 -16.19524 -15.84028 -15.37982 -15.07692 -14.82709 -14.47507 -14.36741 -14.24036 -13.94805 -13.76664 -13.61120 -13.52719 -13.47569 -13.09192 -12.92053 -12.63720 -12.42929 -12.17129 -12.02729 -11.93823 -11.83807 -11.42351 -11.00594 -10.73380 -10.25223 -9.82837 -9.17695 -5.07212 0.34365 1.09231 1.10400 1.51538 1.57463 1.62913 1.83304 2.05892 2.15142 2.31827 3.09674 3.17827 3.27596 3.49715 3.51346 3.61145 3.75605 3.92414 4.11433 4.14183 4.16152 4.18955 4.32055 4.37808 4.40584 4.46251 4.54759 4.65252 4.73418 4.73584 4.83537 4.92356 5.02349 5.21013 5.28401 5.33893 5.44203 5.64299 5.89592 6.21560 6.36494 6.39699 6.67051 7.09526 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.356 6.356 3 C 0.472 3.528 4 O -0.506 6.506 5 C -0.109 4.109 6 H 0.133 0.867 7 C -0.134 4.134 8 C 0.128 3.872 9 H 0.128 0.872 10 N -0.723 5.723 11 C 0.593 3.407 12 O -0.520 6.520 13 C -0.058 4.058 14 C -0.062 4.062 15 C -0.094 4.094 16 C -0.200 4.200 17 C 0.027 3.973 18 C -0.056 4.056 19 O -0.543 6.543 20 Si 0.721 3.279 21 N -0.525 5.525 22 C -0.127 4.127 23 H 0.064 0.936 24 H 0.063 0.937 25 H 0.104 0.896 26 H 0.090 0.910 27 H 0.092 0.908 28 H 0.396 0.604 29 H 0.069 0.931 30 H 0.066 0.934 31 H 0.081 0.919 32 H 0.151 0.849 33 H 0.114 0.886 34 H 0.384 0.616 35 H -0.253 1.253 36 H -0.253 1.253 37 H 0.416 0.584 38 H 0.090 0.910 39 H 0.101 0.899 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.433 0.752 0.120 0.876 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.272 6.272 3 C 0.315 3.685 4 O -0.393 6.393 5 C -0.128 4.128 6 H 0.151 0.849 7 C -0.173 4.173 8 C 0.023 3.977 9 H 0.146 0.854 10 N -0.374 5.374 11 C 0.382 3.618 12 O -0.395 6.395 13 C -0.171 4.171 14 C -0.071 4.071 15 C -0.151 4.151 16 C -0.225 4.225 17 C -0.091 4.091 18 C -0.166 4.166 19 O -0.348 6.348 20 Si 0.621 3.379 21 N -0.121 5.121 22 C -0.165 4.165 23 H 0.083 0.917 24 H 0.082 0.918 25 H 0.122 0.878 26 H 0.108 0.892 27 H 0.110 0.890 28 H 0.230 0.770 29 H 0.087 0.913 30 H 0.085 0.915 31 H 0.100 0.900 32 H 0.169 0.831 33 H 0.132 0.868 34 H 0.232 0.768 35 H -0.177 1.177 36 H -0.178 1.178 37 H 0.254 0.746 38 H 0.109 0.891 39 H 0.120 0.880 Dipole moment (debyes) X Y Z Total from point charges 0.173 0.437 -0.607 0.767 hybrid contribution -1.827 0.041 0.323 1.856 sum -1.654 0.477 -0.284 1.745 Atomic orbital electron populations 1.23331 0.75882 1.04077 1.02697 1.86524 1.23759 1.33215 1.83725 1.23471 0.91574 0.81445 0.72035 1.90682 1.66996 1.36457 1.45170 1.22310 0.87727 1.00956 1.01831 0.84888 1.23460 0.97938 1.01335 0.94571 1.22466 0.97974 0.89383 0.87851 0.85399 1.45841 1.16148 1.37283 1.38095 1.17056 0.81777 0.82623 0.80394 1.90839 1.46144 1.38073 1.64467 1.20210 0.93623 0.98807 1.04485 1.19949 0.94432 0.97440 0.95241 1.20400 0.92946 0.97870 1.03838 1.20609 0.96429 1.01031 1.04435 1.21111 0.94374 0.98560 0.95072 1.24964 1.07828 0.84366 0.99447 1.86503 1.37921 1.47183 1.63235 0.94013 0.85270 0.81757 0.76891 1.41870 1.14617 1.26458 1.29157 1.23398 0.97107 0.94967 1.01069 0.91679 0.91810 0.87779 0.89172 0.88966 0.76999 0.91256 0.91505 0.89988 0.83140 0.86846 0.76835 1.17689 1.17814 0.74638 0.89105 0.88034 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.56 101.05 1.07 1.04 16 2 O -0.36 -0.43 10.57 -39.26 -0.41 -0.85 16 3 C 0.47 0.66 7.48 36.01 0.27 0.93 16 4 O -0.51 -2.06 15.65 -18.75 -0.29 -2.35 16 5 C -0.11 0.16 4.26 -90.96 -0.39 -0.23 16 6 H 0.13 -0.43 8.14 -51.93 -0.42 -0.85 16 7 C -0.13 0.21 7.43 -25.92 -0.19 0.02 16 8 C 0.13 -0.17 4.24 -67.10 -0.28 -0.45 16 9 H 0.13 -0.08 7.46 -51.93 -0.39 -0.47 16 10 N -0.72 0.64 5.35 -54.30 -0.29 0.35 16 11 C 0.59 1.20 7.79 -12.86 -0.10 1.10 16 12 O -0.52 -2.59 14.40 5.20 0.07 -2.51 16 13 C -0.06 -0.09 7.06 -81.98 -0.58 -0.66 16 14 C -0.06 -0.11 6.21 -104.16 -0.65 -0.76 16 15 C -0.09 -0.13 9.83 36.01 0.35 0.23 16 16 C -0.20 -0.02 9.27 -39.98 -0.37 -0.39 16 17 C 0.03 -0.01 6.47 -81.96 -0.53 -0.54 16 18 C -0.06 0.09 3.08 36.00 0.11 0.20 16 19 O -0.54 0.68 12.88 -35.23 -0.45 0.22 16 20 Si 0.72 -1.57 30.56 -169.99 -5.19 -6.77 16 21 N -0.52 0.36 5.99 -5.70 -0.03 0.32 16 22 C -0.13 0.24 7.16 -25.89 -0.19 0.06 16 23 H 0.06 -0.04 8.13 -51.93 -0.42 -0.46 16 24 H 0.06 -0.04 8.13 -51.93 -0.42 -0.46 16 25 H 0.10 -0.31 8.14 -51.92 -0.42 -0.73 16 26 H 0.09 -0.10 8.09 -51.93 -0.42 -0.53 16 27 H 0.09 -0.16 8.14 -51.93 -0.42 -0.58 16 28 H 0.40 -1.17 7.86 -40.82 -0.32 -1.49 16 29 H 0.07 0.09 8.14 -51.93 -0.42 -0.33 16 30 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 31 H 0.08 0.23 6.49 -51.93 -0.34 -0.10 16 32 H 0.15 -0.30 6.19 -52.49 -0.32 -0.62 16 33 H 0.11 -0.16 7.96 -51.93 -0.41 -0.58 16 34 H 0.38 -1.81 8.70 45.56 0.40 -1.42 16 35 H -0.25 -0.11 7.11 56.52 0.40 0.29 16 36 H -0.25 -0.23 7.11 56.52 0.40 0.17 16 37 H 0.42 -1.18 8.19 -40.82 -0.33 -1.52 16 38 H 0.09 -0.24 8.14 -51.93 -0.42 -0.66 16 39 H 0.10 -0.12 7.41 -51.93 -0.38 -0.50 16 LS Contribution 333.90 15.07 5.03 5.03 Total: 0.00 -9.15 333.90 -8.15 -17.31 By element: Atomic # 1 Polarization: -6.18 SS G_CDS: -5.11 Total: -11.28 kcal Atomic # 6 Polarization: 2.00 SS G_CDS: -1.47 Total: 0.53 kcal Atomic # 7 Polarization: 1.00 SS G_CDS: -0.32 Total: 0.67 kcal Atomic # 8 Polarization: -4.41 SS G_CDS: -1.09 Total: -5.49 kcal Atomic # 14 Polarization: -1.57 SS G_CDS: -5.19 Total: -6.77 kcal Total LS contribution 5.03 Total: 5.03 kcal Total: -9.15 -8.15 -17.31 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10970304_13940406.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -65.537 kcal (2) G-P(sol) polarization free energy of solvation -9.153 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -74.691 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.154 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.308 kcal (6) G-S(sol) free energy of system = (1) + (5) -82.845 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds