Wall clock time and date at job start Sat Mar 6 2021 15:35:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45192 * 1 3 3 C 1.34237 * 116.99987 * 2 1 4 4 O 1.20826 * 119.99934 * 0.02562 * 3 2 1 5 5 C 1.50695 * 120.00135 * 179.97438 * 3 2 1 6 6 H 1.09001 * 112.85394 * 311.19983 * 5 3 2 7 7 C 1.53787 * 113.69078 * 82.46702 * 5 3 2 8 8 C 1.53780 * 87.07894 * 139.99164 * 7 5 3 9 9 H 1.09000 * 113.68988 * 89.13299 * 8 7 5 10 10 N 1.46498 * 113.61288 * 220.01789 * 8 7 5 11 11 C 1.34776 * 120.00079 * 252.50041 * 10 8 7 12 12 O 1.21284 * 120.00345 * 0.02562 * 11 10 8 13 13 C 1.50705 * 120.00282 * 179.97438 * 11 10 8 14 14 C 1.50700 * 109.47261 * 179.97438 * 13 11 10 15 15 C 1.34856 * 125.88676 * 85.03092 * 14 13 11 16 16 C 1.40885 * 107.41313 * 179.97438 * 15 14 13 17 17 C 1.34849 * 107.42015 * 359.97438 * 16 15 14 18 18 C 1.50701 * 125.89155 * 180.02562 * 17 16 15 19 19 O 1.42896 * 109.47417 * 245.02927 * 18 17 16 20 20 Si 1.86301 * 109.47149 * 5.02943 * 18 17 16 21 21 N 1.36335 * 125.89163 * 265.31316 * 14 13 11 22 22 C 1.53773 * 87.08208 * 334.56919 * 8 7 5 23 23 H 1.09002 * 109.47013 * 59.99883 * 1 2 3 24 24 H 1.08999 * 109.47233 * 179.97438 * 1 2 3 25 25 H 1.09000 * 109.47319 * 299.99710 * 1 2 3 26 26 H 1.09000 * 113.61363 * 25.44304 * 7 5 3 27 27 H 1.09000 * 113.61078 * 254.53796 * 7 5 3 28 28 H 0.96992 * 120.00210 * 72.49769 * 10 8 7 29 29 H 1.08997 * 109.46527 * 60.00011 * 13 11 10 30 30 H 1.09000 * 109.47094 * 300.00491 * 13 11 10 31 31 H 1.08002 * 126.28978 * 359.97438 * 15 14 13 32 32 H 1.07999 * 126.29003 * 180.02562 * 16 15 14 33 33 H 1.09002 * 109.47060 * 125.02954 * 18 17 16 34 34 H 0.96708 * 114.00101 * 59.99427 * 19 18 17 35 35 H 1.48494 * 109.99914 * 58.67711 * 20 18 17 36 36 H 1.48493 * 110.00101 * 179.97438 * 20 18 17 37 37 H 0.96998 * 125.63907 * 0.02562 * 21 14 13 38 38 H 1.09004 * 113.61189 * 139.98745 * 22 8 7 39 39 H 1.09000 * 113.61733 * 270.88042 * 22 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4519 0.0000 0.0000 3 6 2.0613 1.1961 0.0000 4 8 1.4033 2.2094 0.0005 5 6 3.5662 1.2750 0.0006 6 1 4.0233 0.6366 0.7567 7 6 4.1935 1.1227 -1.3953 8 6 5.1827 2.2263 -0.9848 9 1 6.0822 1.8493 -0.4982 10 7 5.4736 3.1818 -2.0565 11 6 6.6726 3.1601 -2.6715 12 8 7.5107 2.3492 -2.3381 13 6 6.9718 4.1426 -3.7744 14 6 8.3685 3.9093 -4.2900 15 6 8.7239 3.0116 -5.2315 16 6 10.1164 3.1219 -5.4148 17 6 10.5588 4.0831 -4.5789 18 6 11.9876 4.5403 -4.4355 19 8 12.4607 4.2214 -3.1254 20 14 13.0455 3.6792 -5.7045 21 7 9.4914 4.5655 -3.8811 22 6 4.1077 2.7143 0.0005 23 1 -0.3633 0.5139 -0.8900 24 1 -0.3633 -1.0276 -0.0005 25 1 -0.3634 0.5138 0.8900 26 1 3.5273 1.4134 -2.2074 27 1 4.6642 0.1533 -1.5589 28 1 4.8033 3.8300 -2.3235 29 1 6.8927 5.1584 -3.3872 30 1 6.2570 4.0065 -4.5860 31 1 8.0626 2.3329 -5.7496 32 1 10.7188 2.5435 -6.0997 33 1 12.0413 5.6182 -4.5888 34 1 12.4414 3.2767 -2.9194 35 1 12.5443 3.9773 -7.0702 36 1 14.4568 4.1220 -5.5741 37 1 9.5249 5.2626 -3.2074 38 1 4.5091 3.0299 0.9636 39 1 3.4179 3.4402 -0.4300 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10970304_14644196.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:35:53 Heat of formation + Delta-G solvation = -79.510548 kcal Electronic energy + Delta-G solvation = -23001.200712 eV Core-core repulsion = 19298.307769 eV Total energy + Delta-G solvation = -3702.892943 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 295.130 amu Computer time = 0.56 seconds Orbital eigenvalues (eV) -42.30458 -41.93704 -40.68314 -39.12151 -37.63160 -37.33596 -34.59470 -33.02039 -31.84969 -29.75149 -29.12826 -26.96590 -26.88875 -25.09601 -22.79600 -21.77990 -21.28765 -21.11451 -20.63165 -19.03916 -18.79367 -18.14616 -17.95336 -17.42491 -17.03672 -16.54308 -16.36762 -16.16314 -16.04377 -15.18014 -15.04245 -14.58788 -14.53117 -14.32165 -14.08687 -14.03946 -13.92196 -13.74094 -13.70084 -13.35302 -13.08727 -12.82078 -12.57112 -12.39088 -11.99806 -11.90079 -11.89025 -11.81842 -11.39654 -10.88708 -10.57533 -10.14552 -9.70504 -8.89271 -4.93502 1.11111 1.16307 1.30832 1.58336 1.61610 1.72937 1.96525 1.97787 2.31232 2.52222 3.13001 3.21061 3.49871 3.52912 3.62630 3.64616 3.85795 3.87177 3.97570 4.01266 4.13270 4.20700 4.34415 4.39217 4.42709 4.43884 4.50547 4.56576 4.60052 4.68562 4.76298 4.83591 4.99269 5.32706 5.33972 5.36514 5.40702 6.06854 6.21002 6.38406 6.57404 6.67096 6.69303 7.17426 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.357 6.357 3 C 0.472 3.528 4 O -0.506 6.506 5 C -0.110 4.110 6 H 0.132 0.868 7 C -0.133 4.133 8 C 0.126 3.874 9 H 0.124 0.876 10 N -0.723 5.723 11 C 0.513 3.487 12 O -0.520 6.520 13 C -0.073 4.073 14 C 0.035 3.965 15 C -0.173 4.173 16 C -0.187 4.187 17 C -0.010 4.010 18 C -0.050 4.050 19 O -0.547 6.547 20 Si 0.719 3.281 21 N -0.535 5.535 22 C -0.127 4.127 23 H 0.064 0.936 24 H 0.104 0.896 25 H 0.064 0.936 26 H 0.091 0.909 27 H 0.090 0.910 28 H 0.403 0.597 29 H 0.100 0.900 30 H 0.118 0.882 31 H 0.136 0.864 32 H 0.142 0.858 33 H 0.109 0.891 34 H 0.383 0.617 35 H -0.255 1.255 36 H -0.256 1.256 37 H 0.412 0.588 38 H 0.088 0.912 39 H 0.103 0.897 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.746 -1.149 -0.243 2.987 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.273 6.273 3 C 0.315 3.685 4 O -0.393 6.393 5 C -0.129 4.129 6 H 0.149 0.851 7 C -0.172 4.172 8 C 0.021 3.979 9 H 0.141 0.859 10 N -0.375 5.375 11 C 0.299 3.701 12 O -0.395 6.395 13 C -0.114 4.114 14 C -0.079 4.079 15 C -0.197 4.197 16 C -0.212 4.212 17 C -0.124 4.124 18 C -0.160 4.160 19 O -0.352 6.352 20 Si 0.620 3.380 21 N -0.130 5.130 22 C -0.165 4.165 23 H 0.082 0.918 24 H 0.122 0.878 25 H 0.083 0.917 26 H 0.110 0.890 27 H 0.109 0.891 28 H 0.238 0.762 29 H 0.118 0.882 30 H 0.136 0.864 31 H 0.154 0.846 32 H 0.159 0.841 33 H 0.126 0.874 34 H 0.231 0.769 35 H -0.179 1.179 36 H -0.181 1.181 37 H 0.249 0.751 38 H 0.106 0.894 39 H 0.121 0.879 Dipole moment (debyes) X Y Z Total from point charges -1.723 -0.589 -0.563 1.905 hybrid contribution -1.247 1.142 0.500 1.763 sum -2.970 0.553 -0.063 3.021 Atomic orbital electron populations 1.23329 0.75897 1.04066 1.02697 1.86523 1.23751 1.33256 1.83739 1.23477 0.91576 0.81428 0.72023 1.90682 1.66999 1.36446 1.45170 1.22314 0.87694 1.01003 1.01912 0.85053 1.23451 0.97944 1.01289 0.94542 1.22410 0.97698 0.89619 0.88154 0.85855 1.45954 1.16483 1.37271 1.37785 1.20649 0.81614 0.84941 0.82887 1.90768 1.46202 1.38451 1.64032 1.20144 0.93522 0.99640 0.98051 1.19472 0.87213 0.99976 1.01194 1.20590 0.95443 1.01680 1.02024 1.20643 0.95474 1.01458 1.03622 1.20847 0.89724 1.01663 1.00161 1.24828 0.92349 1.04646 0.94186 1.86469 1.86529 1.30765 1.31454 0.93981 0.77406 0.90352 0.76310 1.41794 1.06042 1.32295 1.32861 1.23383 0.97182 0.94944 1.01010 0.91772 0.87796 0.91713 0.89016 0.89136 0.76203 0.88199 0.86433 0.84574 0.84073 0.87392 0.76940 1.17926 1.18089 0.75133 0.89350 0.87897 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 101.05 1.07 1.04 16 2 O -0.36 -0.37 10.57 -39.28 -0.41 -0.79 16 3 C 0.47 0.56 7.49 36.00 0.27 0.83 16 4 O -0.51 -1.93 15.65 -18.75 -0.29 -2.23 16 5 C -0.11 0.18 4.26 -90.96 -0.39 -0.20 16 6 H 0.13 -0.42 8.14 -51.93 -0.42 -0.85 16 7 C -0.13 0.26 7.43 -25.92 -0.19 0.06 16 8 C 0.13 -0.22 4.24 -67.12 -0.28 -0.51 16 9 H 0.12 -0.07 7.46 -51.93 -0.39 -0.46 16 10 N -0.72 1.60 5.35 -53.02 -0.28 1.31 16 11 C 0.51 0.10 7.82 -10.98 -0.09 0.01 16 12 O -0.52 -2.40 15.63 5.55 0.09 -2.31 16 13 C -0.07 0.14 6.24 -29.03 -0.18 -0.04 16 14 C 0.04 0.04 5.66 -81.79 -0.46 -0.42 16 15 C -0.17 -0.36 10.77 -39.78 -0.43 -0.79 16 16 C -0.19 -0.34 9.37 -39.78 -0.37 -0.71 16 17 C -0.01 -0.02 6.50 -81.79 -0.53 -0.55 16 18 C -0.05 -0.03 3.08 36.01 0.11 0.08 16 19 O -0.55 -0.64 12.88 -35.23 -0.45 -1.09 16 20 Si 0.72 -0.35 30.60 -169.99 -5.20 -5.56 16 21 N -0.54 -0.61 6.07 -5.44 -0.03 -0.65 16 22 C -0.13 0.28 7.15 -25.93 -0.19 0.09 16 23 H 0.06 -0.06 8.13 -51.93 -0.42 -0.48 16 24 H 0.10 -0.33 8.14 -51.93 -0.42 -0.75 16 25 H 0.06 -0.05 8.13 -51.93 -0.42 -0.48 16 26 H 0.09 -0.16 8.10 -51.93 -0.42 -0.58 16 27 H 0.09 -0.17 8.14 -51.93 -0.42 -0.59 16 28 H 0.40 -1.86 8.73 -40.82 -0.36 -2.22 16 29 H 0.10 -0.41 8.14 -51.93 -0.42 -0.84 16 30 H 0.12 -0.47 8.14 -51.93 -0.42 -0.89 16 31 H 0.14 0.13 8.06 -52.49 -0.42 -0.30 16 32 H 0.14 -0.01 6.24 -52.49 -0.33 -0.34 16 33 H 0.11 0.06 7.96 -51.93 -0.41 -0.35 16 34 H 0.38 -0.76 8.70 45.56 0.40 -0.37 16 35 H -0.25 -0.48 7.11 56.52 0.40 -0.08 16 36 H -0.26 -0.60 7.11 56.52 0.40 -0.20 16 37 H 0.41 -0.18 8.96 -40.82 -0.37 -0.55 16 38 H 0.09 -0.24 8.14 -51.93 -0.42 -0.66 16 39 H 0.10 -0.17 7.41 -51.93 -0.39 -0.55 16 LS Contribution 338.27 15.07 5.10 5.10 Total: 0.00 -10.42 338.27 -8.42 -18.84 By element: Atomic # 1 Polarization: -6.28 SS G_CDS: -5.26 Total: -11.54 kcal Atomic # 6 Polarization: 0.56 SS G_CDS: -1.67 Total: -1.10 kcal Atomic # 7 Polarization: 0.99 SS G_CDS: -0.32 Total: 0.67 kcal Atomic # 8 Polarization: -5.34 SS G_CDS: -1.08 Total: -6.41 kcal Atomic # 14 Polarization: -0.35 SS G_CDS: -5.20 Total: -5.56 kcal Total LS contribution 5.10 Total: 5.10 kcal Total: -10.42 -8.42 -18.84 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10970304_14644196.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -60.669 kcal (2) G-P(sol) polarization free energy of solvation -10.418 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -71.088 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.423 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.841 kcal (6) G-S(sol) free energy of system = (1) + (5) -79.511 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.57 seconds