Wall clock time and date at job start Sat Mar 6 2021 15:35:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45192 * 1 3 3 C 1.34237 * 116.99987 * 2 1 4 4 O 1.20826 * 119.99934 * 0.02562 * 3 2 1 5 5 C 1.50695 * 120.00135 * 179.97438 * 3 2 1 6 6 H 1.09001 * 112.85394 * 311.19983 * 5 3 2 7 7 C 1.53787 * 113.69078 * 82.46702 * 5 3 2 8 8 C 1.53780 * 87.07894 * 139.99164 * 7 5 3 9 9 H 1.09000 * 113.68988 * 89.13299 * 8 7 5 10 10 N 1.46498 * 113.61288 * 220.01789 * 8 7 5 11 11 C 1.34776 * 120.00079 * 252.50041 * 10 8 7 12 12 O 1.21284 * 120.00345 * 0.02562 * 11 10 8 13 13 C 1.50705 * 120.00282 * 179.97438 * 11 10 8 14 14 C 1.50700 * 109.47261 * 179.97438 * 13 11 10 15 15 C 1.34856 * 125.88676 * 85.03092 * 14 13 11 16 16 C 1.40885 * 107.41313 * 179.97438 * 15 14 13 17 17 C 1.34849 * 107.42015 * 359.97438 * 16 15 14 18 18 C 1.50701 * 125.89155 * 180.02562 * 17 16 15 19 19 O 1.42896 * 109.47417 * 245.02927 * 18 17 16 20 20 Si 1.86301 * 109.47149 * 5.02943 * 18 17 16 21 21 N 1.36335 * 125.89163 * 265.31316 * 14 13 11 22 22 C 1.53773 * 87.08208 * 334.56919 * 8 7 5 23 23 H 1.09002 * 109.47013 * 59.99883 * 1 2 3 24 24 H 1.08999 * 109.47233 * 179.97438 * 1 2 3 25 25 H 1.09000 * 109.47319 * 299.99710 * 1 2 3 26 26 H 1.09000 * 113.61363 * 25.44304 * 7 5 3 27 27 H 1.09000 * 113.61078 * 254.53796 * 7 5 3 28 28 H 0.96992 * 120.00210 * 72.49769 * 10 8 7 29 29 H 1.08997 * 109.46527 * 60.00011 * 13 11 10 30 30 H 1.09000 * 109.47094 * 300.00491 * 13 11 10 31 31 H 1.08002 * 126.28978 * 359.97438 * 15 14 13 32 32 H 1.07999 * 126.29003 * 180.02562 * 16 15 14 33 33 H 1.09002 * 109.47060 * 125.02954 * 18 17 16 34 34 H 0.96708 * 114.00101 * 59.99427 * 19 18 17 35 35 H 1.48494 * 109.99914 * 58.67711 * 20 18 17 36 36 H 1.48493 * 110.00101 * 179.97438 * 20 18 17 37 37 H 0.96998 * 125.63907 * 0.02562 * 21 14 13 38 38 H 1.09004 * 113.61189 * 139.98745 * 22 8 7 39 39 H 1.09000 * 113.61733 * 270.88042 * 22 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4519 0.0000 0.0000 3 6 2.0613 1.1961 0.0000 4 8 1.4033 2.2094 0.0005 5 6 3.5662 1.2750 0.0006 6 1 4.0233 0.6366 0.7567 7 6 4.1935 1.1227 -1.3953 8 6 5.1827 2.2263 -0.9848 9 1 6.0822 1.8493 -0.4982 10 7 5.4736 3.1818 -2.0565 11 6 6.6726 3.1601 -2.6715 12 8 7.5107 2.3492 -2.3381 13 6 6.9718 4.1426 -3.7744 14 6 8.3685 3.9093 -4.2900 15 6 8.7239 3.0116 -5.2315 16 6 10.1164 3.1219 -5.4148 17 6 10.5588 4.0831 -4.5789 18 6 11.9876 4.5403 -4.4355 19 8 12.4607 4.2214 -3.1254 20 14 13.0455 3.6792 -5.7045 21 7 9.4914 4.5655 -3.8811 22 6 4.1077 2.7143 0.0005 23 1 -0.3633 0.5139 -0.8900 24 1 -0.3633 -1.0276 -0.0005 25 1 -0.3634 0.5138 0.8900 26 1 3.5273 1.4134 -2.2074 27 1 4.6642 0.1533 -1.5589 28 1 4.8033 3.8300 -2.3235 29 1 6.8927 5.1584 -3.3872 30 1 6.2570 4.0065 -4.5860 31 1 8.0626 2.3329 -5.7496 32 1 10.7188 2.5435 -6.0997 33 1 12.0413 5.6182 -4.5888 34 1 12.4414 3.2767 -2.9194 35 1 12.5443 3.9773 -7.0702 36 1 14.4568 4.1220 -5.5741 37 1 9.5249 5.2626 -3.2074 38 1 4.5091 3.0299 0.9636 39 1 3.4179 3.4402 -0.4300 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10970304_14644196.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:35:53 Heat of formation + Delta-G solvation = -82.167642 kcal Electronic energy + Delta-G solvation = -23001.315932 eV Core-core repulsion = 19298.307769 eV Total energy + Delta-G solvation = -3703.008163 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 295.130 amu Computer time = 0.66 seconds Orbital eigenvalues (eV) -42.33127 -41.95194 -40.69410 -39.09893 -37.68449 -37.43381 -34.57826 -32.97478 -31.90955 -29.73862 -29.09245 -26.83061 -26.81612 -25.11711 -22.78896 -21.75109 -21.34204 -21.12294 -20.58384 -19.04315 -18.82920 -18.11415 -17.95424 -17.45554 -17.06246 -16.51468 -16.33546 -16.10143 -16.03604 -15.22718 -15.05315 -14.61901 -14.52227 -14.34152 -14.10886 -14.08121 -13.90552 -13.74061 -13.57354 -13.32914 -13.02481 -12.73702 -12.47750 -12.32931 -12.09240 -11.98291 -11.86067 -11.79486 -11.42988 -10.93963 -10.62467 -10.07644 -9.78091 -8.94836 -4.92565 1.04873 1.12279 1.30028 1.61508 1.65682 1.70623 1.92927 1.93041 2.35870 2.54220 3.24863 3.33764 3.52045 3.66280 3.70834 3.75444 3.82511 3.97477 4.09426 4.22127 4.25418 4.27948 4.38097 4.50840 4.52354 4.59026 4.63192 4.65417 4.68210 4.81610 4.83735 4.92608 5.11848 5.27312 5.30835 5.32545 5.52014 6.01691 6.15271 6.52183 6.63847 6.66387 6.68661 7.25545 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.364 6.364 3 C 0.472 3.528 4 O -0.537 6.537 5 C -0.108 4.108 6 H 0.149 0.851 7 C -0.128 4.128 8 C 0.127 3.873 9 H 0.112 0.888 10 N -0.710 5.710 11 C 0.514 3.486 12 O -0.570 6.570 13 C -0.069 4.069 14 C 0.032 3.968 15 C -0.200 4.200 16 C -0.201 4.201 17 C -0.022 4.022 18 C -0.054 4.054 19 O -0.561 6.561 20 Si 0.803 3.197 21 N -0.538 5.538 22 C -0.119 4.119 23 H 0.062 0.938 24 H 0.127 0.873 25 H 0.061 0.939 26 H 0.091 0.909 27 H 0.090 0.910 28 H 0.417 0.583 29 H 0.126 0.874 30 H 0.142 0.858 31 H 0.141 0.859 32 H 0.154 0.846 33 H 0.106 0.894 34 H 0.395 0.605 35 H -0.285 1.285 36 H -0.294 1.294 37 H 0.418 0.582 38 H 0.096 0.904 39 H 0.099 0.901 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.368 -1.082 -0.117 3.539 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.280 6.280 3 C 0.316 3.684 4 O -0.426 6.426 5 C -0.127 4.127 6 H 0.166 0.834 7 C -0.167 4.167 8 C 0.021 3.979 9 H 0.130 0.870 10 N -0.362 5.362 11 C 0.301 3.699 12 O -0.448 6.448 13 C -0.109 4.109 14 C -0.082 4.082 15 C -0.225 4.225 16 C -0.226 4.226 17 C -0.136 4.136 18 C -0.164 4.164 19 O -0.369 6.369 20 Si 0.707 3.293 21 N -0.133 5.133 22 C -0.157 4.157 23 H 0.080 0.920 24 H 0.145 0.855 25 H 0.080 0.920 26 H 0.110 0.890 27 H 0.109 0.891 28 H 0.254 0.746 29 H 0.144 0.856 30 H 0.160 0.840 31 H 0.159 0.841 32 H 0.171 0.829 33 H 0.124 0.876 34 H 0.245 0.755 35 H -0.212 1.212 36 H -0.222 1.222 37 H 0.255 0.745 38 H 0.114 0.886 39 H 0.117 0.883 Dipole moment (debyes) X Y Z Total from point charges -2.393 -0.521 -0.416 2.484 hybrid contribution -1.105 1.116 0.470 1.639 sum -3.497 0.595 0.055 3.548 Atomic orbital electron populations 1.23525 0.75036 1.05592 1.02472 1.86526 1.24779 1.33264 1.83469 1.23992 0.92497 0.80986 0.70927 1.90664 1.67878 1.37329 1.46774 1.22446 0.85912 1.01778 1.02561 0.83356 1.23414 0.97662 1.01247 0.94390 1.22324 0.97293 0.89874 0.88361 0.86993 1.45864 1.16168 1.37113 1.37071 1.20981 0.81456 0.84516 0.82920 1.90751 1.47795 1.40577 1.65689 1.20259 0.92258 1.00321 0.98089 1.19918 0.88392 0.99278 1.00575 1.20860 0.95879 1.02609 1.03114 1.20922 0.95835 1.01791 1.04020 1.20994 0.90196 1.01921 1.00447 1.24972 0.92245 1.04773 0.94391 1.86432 1.86518 1.32159 1.31747 0.92921 0.73778 0.89181 0.73454 1.41899 1.06082 1.32431 1.32896 1.23326 0.96623 0.94564 1.01200 0.91964 0.85464 0.92011 0.89027 0.89112 0.74572 0.85578 0.84032 0.84083 0.82894 0.87641 0.75480 1.21193 1.22162 0.74466 0.88575 0.88262 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.05 10.56 113.37 1.20 1.15 16 2 O -0.36 -0.75 10.57 -51.48 -0.54 -1.30 16 3 C 0.47 1.16 7.49 71.23 0.53 1.69 16 4 O -0.54 -4.34 15.65 21.96 0.34 -4.00 16 5 C -0.11 0.39 4.26 -11.02 -0.05 0.35 16 6 H 0.15 -1.06 8.14 -2.39 -0.02 -1.08 16 7 C -0.13 0.53 7.43 31.12 0.23 0.76 16 8 C 0.13 -0.48 4.24 45.52 0.19 -0.29 16 9 H 0.11 -0.09 7.46 -2.39 -0.02 -0.10 16 10 N -0.71 3.63 5.35 -440.05 -2.36 1.27 16 11 C 0.51 0.01 7.82 87.66 0.69 0.69 16 12 O -0.57 -5.59 15.63 -3.04 -0.05 -5.64 16 13 C -0.07 0.35 6.24 29.10 0.18 0.53 16 14 C 0.03 0.07 5.66 41.08 0.23 0.30 16 15 C -0.20 -0.91 10.77 22.14 0.24 -0.68 16 16 C -0.20 -0.82 9.37 22.14 0.21 -0.61 16 17 C -0.02 -0.08 6.50 41.08 0.27 0.19 16 18 C -0.05 -0.08 3.08 71.24 0.22 0.14 16 19 O -0.56 -1.44 12.88 -148.98 -1.92 -3.36 16 20 Si 0.80 -0.39 30.60 68.60 2.10 1.71 16 21 N -0.54 -1.30 6.07 -171.12 -1.04 -2.34 16 22 C -0.12 0.58 7.15 31.12 0.22 0.80 16 23 H 0.06 -0.09 8.13 -2.39 -0.02 -0.11 16 24 H 0.13 -0.90 8.14 -2.39 -0.02 -0.92 16 25 H 0.06 -0.08 8.13 -2.39 -0.02 -0.10 16 26 H 0.09 -0.36 8.10 -2.39 -0.02 -0.38 16 27 H 0.09 -0.35 8.14 -2.39 -0.02 -0.37 16 28 H 0.42 -4.39 8.73 -92.71 -0.81 -5.20 16 29 H 0.13 -1.30 8.14 -2.39 -0.02 -1.32 16 30 H 0.14 -1.40 8.14 -2.39 -0.02 -1.42 16 31 H 0.14 0.34 8.06 -2.91 -0.02 0.31 16 32 H 0.15 0.03 6.24 -2.91 -0.02 0.01 16 33 H 0.11 0.17 7.96 -2.39 -0.02 0.15 16 34 H 0.40 -1.51 8.70 -74.05 -0.64 -2.16 16 35 H -0.29 -1.29 7.11 99.48 0.71 -0.59 16 36 H -0.29 -1.71 7.11 99.48 0.71 -1.00 16 37 H 0.42 -0.36 8.96 -92.71 -0.83 -1.19 16 38 H 0.10 -0.59 8.14 -2.38 -0.02 -0.61 16 39 H 0.10 -0.36 7.41 -2.39 -0.02 -0.38 16 Total: 0.00 -24.80 338.27 -0.24 -25.05 By element: Atomic # 1 Polarization: -15.29 SS G_CDS: -1.14 Total: -16.43 kcal Atomic # 6 Polarization: 0.67 SS G_CDS: 4.36 Total: 5.03 kcal Atomic # 7 Polarization: 2.33 SS G_CDS: -3.40 Total: -1.07 kcal Atomic # 8 Polarization: -12.12 SS G_CDS: -2.17 Total: -14.29 kcal Atomic # 14 Polarization: -0.39 SS G_CDS: 2.10 Total: 1.71 kcal Total: -24.80 -0.24 -25.05 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10970304_14644196.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -57.122 kcal (2) G-P(sol) polarization free energy of solvation -24.803 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -81.925 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.243 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.046 kcal (6) G-S(sol) free energy of system = (1) + (5) -82.168 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.66 seconds