Wall clock time and date at job start Sat Mar 6 2021 15:35:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45201 * 1 3 3 C 1.34233 * 117.00173 * 2 1 4 4 O 1.20828 * 119.99368 * 0.02562 * 3 2 1 5 5 C 1.50693 * 120.00363 * 179.97438 * 3 2 1 6 6 H 1.08999 * 112.90717 * 311.25267 * 5 3 2 7 7 C 1.53959 * 113.66568 * 82.44183 * 5 3 2 8 8 C 1.53781 * 87.01918 * 139.93458 * 7 5 3 9 9 H 1.09001 * 113.61536 * 89.22969 * 8 7 5 10 10 N 1.46498 * 113.61116 * 220.04907 * 8 7 5 11 11 C 1.34777 * 119.99828 * 253.85697 * 10 8 7 12 12 O 1.21283 * 120.00222 * 0.28168 * 11 10 8 13 13 C 1.50703 * 120.00290 * 180.27728 * 11 10 8 14 14 C 1.53541 * 109.82126 * 79.99818 * 13 11 10 15 15 C 1.53032 * 108.56201 * 180.48897 * 14 13 11 16 16 C 1.50204 * 110.32219 * 310.43433 * 15 14 13 17 17 C 1.50693 * 118.54898 * 200.07346 * 16 15 14 18 18 O 1.42908 * 109.46996 * 69.99905 * 17 16 15 19 19 Si 1.86300 * 109.47062 * 189.99572 * 17 16 15 20 20 C 1.31117 * 122.90155 * 20.04427 * 16 15 14 21 21 N 1.38923 * 121.84995 * 359.60182 * 20 16 15 22 22 C 1.53776 * 113.61523 * 180.02562 * 5 3 2 23 23 H 1.08995 * 109.46585 * 179.97438 * 1 2 3 24 24 H 1.08998 * 109.46996 * 300.00028 * 1 2 3 25 25 H 1.09006 * 109.46908 * 60.00158 * 1 2 3 26 26 H 1.08995 * 113.61644 * 25.41136 * 7 5 3 27 27 H 1.09006 * 113.66662 * 254.46107 * 7 5 3 28 28 H 0.97001 * 120.00384 * 74.14144 * 10 8 7 29 29 H 1.08999 * 109.81035 * 319.14107 * 13 11 10 30 30 H 1.08995 * 109.62495 * 300.21586 * 14 13 11 31 31 H 1.09012 * 109.61870 * 60.58339 * 14 13 11 32 32 H 1.08999 * 109.32928 * 70.69377 * 15 14 13 33 33 H 1.09001 * 109.33177 * 190.17124 * 15 14 13 34 34 H 1.08995 * 109.47616 * 310.00043 * 17 16 15 35 35 H 0.96689 * 114.00206 * 60.00351 * 18 17 16 36 36 H 1.48500 * 109.99874 * 58.68528 * 19 17 16 37 37 H 1.48506 * 109.99678 * 179.97438 * 19 17 16 38 38 H 1.08005 * 119.07281 * 179.57225 * 20 16 15 39 39 H 0.97001 * 120.55597 * 193.33392 * 21 20 16 40 40 H 1.09000 * 113.61546 * 105.47122 * 22 5 3 41 41 H 1.08998 * 113.69444 * 334.57541 * 22 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2749 0.0006 6 1 4.0244 0.6362 0.7557 7 6 4.1937 1.1218 -1.3970 8 6 5.1814 2.2267 -0.9866 9 1 6.0816 1.8495 -0.5013 10 7 5.4708 3.1827 -2.0582 11 6 6.6597 3.1450 -2.6920 12 8 7.4879 2.3162 -2.3787 13 6 6.9599 4.1324 -3.7902 14 6 7.3766 5.4785 -3.1804 15 6 7.6622 6.4611 -4.3183 16 6 8.5809 5.8362 -5.3290 17 6 9.3465 6.7389 -6.2616 18 8 10.3472 7.4457 -5.5258 19 14 10.1590 5.7151 -7.5891 20 6 8.7466 4.5399 -5.4352 21 7 8.0823 3.6454 -4.6054 22 6 4.1077 2.7142 0.0011 23 1 -0.3632 -1.0276 -0.0005 24 1 -0.3633 0.5138 0.8900 25 1 -0.3633 0.5138 -0.8901 26 1 3.5270 1.4117 -2.2091 27 1 4.6658 0.1530 -1.5610 28 1 4.8085 3.8456 -2.3089 29 1 6.0781 4.2676 -4.4166 30 1 6.5692 5.8639 -2.5579 31 1 8.2733 5.3442 -2.5753 32 1 6.7249 6.7342 -4.8030 33 1 8.1298 7.3579 -3.9117 34 1 8.6618 7.4519 -6.7207 35 1 10.9925 6.8729 -5.0895 36 1 9.1317 4.9506 -8.3410 37 1 10.9168 6.5939 -8.5158 38 1 9.4181 4.1567 -6.1894 39 1 8.3546 2.7153 -4.5644 40 1 4.5104 3.0289 0.9639 41 1 3.4183 3.4417 -0.4275 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10970304_15413834.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:35:55 Heat of formation + Delta-G solvation = -104.946397 kcal Electronic energy + Delta-G solvation = -23941.382211 eV Core-core repulsion = 20210.074808 eV Total energy + Delta-G solvation = -3731.307403 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 297.145 amu Computer time = 0.75 seconds Orbital eigenvalues (eV) -42.03995 -41.30804 -39.90837 -38.93736 -37.47614 -37.27263 -34.75150 -33.17255 -32.83039 -29.45804 -27.88645 -26.84083 -26.49306 -25.33821 -23.74342 -22.57038 -21.70169 -20.74723 -19.36735 -19.10407 -18.82766 -18.06667 -17.93060 -17.46061 -17.03239 -16.60467 -16.31144 -16.05303 -15.81111 -15.59540 -15.26750 -15.14017 -14.59645 -14.40254 -14.25149 -14.14223 -13.92322 -13.61331 -13.47184 -13.09727 -13.02946 -12.93206 -12.53561 -12.34015 -12.20206 -11.89382 -11.86908 -11.84149 -11.81258 -11.44330 -11.26947 -10.86503 -10.18423 -10.14829 -8.43593 -4.98059 1.04259 1.35305 1.41562 1.46801 1.61717 1.64484 1.99408 2.01561 2.66614 3.23365 3.30533 3.53449 3.63665 3.73577 3.75938 3.79720 3.89693 4.01948 4.07581 4.24423 4.27005 4.34720 4.46442 4.48807 4.56917 4.59655 4.62861 4.64361 4.67323 4.79872 4.82760 4.92053 5.04050 5.07485 5.21794 5.31270 5.32370 5.44735 5.59995 6.25189 6.44231 6.63235 6.84967 6.93525 7.08118 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.364 6.364 3 C 0.471 3.529 4 O -0.537 6.537 5 C -0.107 4.107 6 H 0.151 0.849 7 C -0.129 4.129 8 C 0.127 3.873 9 H 0.118 0.882 10 N -0.704 5.704 11 C 0.518 3.482 12 O -0.566 6.566 13 C 0.136 3.864 14 C -0.118 4.118 15 C -0.055 4.055 16 C -0.292 4.292 17 C -0.048 4.048 18 O -0.564 6.564 19 Si 0.756 3.244 20 C 0.146 3.854 21 N -0.736 5.736 22 C -0.119 4.119 23 H 0.127 0.873 24 H 0.061 0.939 25 H 0.061 0.939 26 H 0.089 0.911 27 H 0.093 0.907 28 H 0.417 0.583 29 H 0.106 0.894 30 H 0.096 0.904 31 H 0.062 0.938 32 H 0.068 0.932 33 H 0.070 0.930 34 H 0.093 0.907 35 H 0.391 0.609 36 H -0.289 1.289 37 H -0.308 1.308 38 H 0.148 0.852 39 H 0.409 0.591 40 H 0.099 0.901 41 H 0.098 0.902 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.697 -3.138 1.736 3.968 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.280 6.280 3 C 0.315 3.685 4 O -0.427 6.427 5 C -0.126 4.126 6 H 0.169 0.831 7 C -0.168 4.168 8 C 0.022 3.978 9 H 0.135 0.865 10 N -0.355 5.355 11 C 0.304 3.696 12 O -0.445 6.445 13 C 0.027 3.973 14 C -0.157 4.157 15 C -0.092 4.092 16 C -0.303 4.303 17 C -0.160 4.160 18 O -0.372 6.372 19 Si 0.664 3.336 20 C 0.025 3.975 21 N -0.369 5.369 22 C -0.157 4.157 23 H 0.145 0.855 24 H 0.080 0.920 25 H 0.080 0.920 26 H 0.108 0.892 27 H 0.111 0.889 28 H 0.254 0.746 29 H 0.124 0.876 30 H 0.115 0.885 31 H 0.081 0.919 32 H 0.086 0.914 33 H 0.088 0.912 34 H 0.110 0.890 35 H 0.240 0.760 36 H -0.217 1.217 37 H -0.237 1.237 38 H 0.165 0.835 39 H 0.246 0.754 40 H 0.118 0.882 41 H 0.117 0.883 Dipole moment (debyes) X Y Z Total from point charges -1.728 -3.051 0.961 3.636 hybrid contribution -1.095 0.407 -0.058 1.170 sum -2.823 -2.645 0.903 3.973 Atomic orbital electron populations 1.23522 0.75063 1.05572 1.02457 1.86524 1.24747 1.33285 1.83475 1.24013 0.92550 0.80978 0.70945 1.90669 1.67890 1.37347 1.46747 1.22477 0.85853 1.01790 1.02506 0.83143 1.23447 0.97646 1.01245 0.94416 1.22415 0.97616 0.89677 0.88096 0.86460 1.45830 1.16869 1.36091 1.36733 1.20806 0.81597 0.84216 0.82993 1.90722 1.47747 1.39694 1.66291 1.21092 0.92035 0.92981 0.91213 1.21803 1.02798 0.92973 0.98140 1.19942 0.98026 0.97573 0.93635 1.20956 1.10081 0.93225 1.06026 1.24758 0.92035 0.99197 0.99972 1.86430 1.42282 1.37941 1.70554 0.94261 0.81811 0.80243 0.77244 1.20487 0.94864 0.89543 0.92576 1.44365 1.35290 1.11659 1.45607 1.23332 0.96536 0.94572 1.01270 0.85484 0.91989 0.92026 0.89224 0.88879 0.74569 0.87640 0.88505 0.91890 0.91382 0.91190 0.88993 0.75966 1.21655 1.23698 0.83503 0.75369 0.88236 0.88314 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.06 10.56 113.37 1.20 1.14 16 2 O -0.36 -0.57 10.57 -51.44 -0.54 -1.12 16 3 C 0.47 0.88 7.49 71.23 0.53 1.42 16 4 O -0.54 -4.12 15.65 21.96 0.34 -3.78 16 5 C -0.11 0.50 4.26 -10.96 -0.05 0.45 16 6 H 0.15 -1.27 8.14 -2.39 -0.02 -1.29 16 7 C -0.13 0.66 7.44 31.18 0.23 0.90 16 8 C 0.13 -0.65 4.22 45.53 0.19 -0.46 16 9 H 0.12 -0.35 7.50 -2.39 -0.02 -0.36 16 10 N -0.70 3.97 5.36 -439.97 -2.36 1.61 16 11 C 0.52 -0.41 7.10 87.66 0.62 0.21 16 12 O -0.57 -3.87 15.68 -3.04 -0.05 -3.92 16 13 C 0.14 -0.43 3.36 44.33 0.15 -0.28 16 14 C -0.12 0.39 5.47 30.79 0.17 0.56 16 15 C -0.05 0.06 5.85 29.70 0.17 0.24 16 16 C -0.29 0.11 5.37 -16.76 -0.09 0.02 16 17 C -0.05 -0.04 2.81 71.23 0.20 0.16 16 18 O -0.56 -1.25 12.88 -148.98 -1.92 -3.17 16 19 Si 0.76 -0.53 29.72 68.60 2.04 1.51 16 20 C 0.15 -0.28 9.62 83.41 0.80 0.53 16 21 N -0.74 0.96 5.47 -329.01 -1.80 -0.84 16 22 C -0.12 0.70 7.16 31.13 0.22 0.93 16 23 H 0.13 -0.93 8.14 -2.39 -0.02 -0.95 16 24 H 0.06 -0.09 8.13 -2.39 -0.02 -0.11 16 25 H 0.06 -0.10 8.13 -2.38 -0.02 -0.12 16 26 H 0.09 -0.40 8.10 -2.39 -0.02 -0.42 16 27 H 0.09 -0.49 8.14 -2.38 -0.02 -0.51 16 28 H 0.42 -4.26 8.71 -92.71 -0.81 -5.06 16 29 H 0.11 -0.66 8.14 -2.39 -0.02 -0.67 16 30 H 0.10 -0.70 8.14 -2.39 -0.02 -0.71 16 31 H 0.06 0.02 8.14 -2.38 -0.02 0.00 16 32 H 0.07 -0.15 8.14 -2.39 -0.02 -0.17 16 33 H 0.07 0.06 8.14 -2.39 -0.02 0.04 16 34 H 0.09 0.25 7.96 -2.39 -0.02 0.23 16 35 H 0.39 -2.15 8.70 -74.06 -0.64 -2.79 16 36 H -0.29 -1.16 7.11 99.48 0.71 -0.45 16 37 H -0.31 -2.39 7.11 99.48 0.71 -1.68 16 38 H 0.15 -0.85 4.48 -2.91 -0.01 -0.86 16 39 H 0.41 -0.41 8.08 -92.71 -0.75 -1.15 16 40 H 0.10 -0.74 8.14 -2.39 -0.02 -0.76 16 41 H 0.10 -0.43 7.41 -2.39 -0.02 -0.45 16 Total: 0.00 -21.14 340.72 -1.02 -22.16 By element: Atomic # 1 Polarization: -17.17 SS G_CDS: -1.09 Total: -18.26 kcal Atomic # 6 Polarization: 1.45 SS G_CDS: 4.36 Total: 5.81 kcal Atomic # 7 Polarization: 4.93 SS G_CDS: -4.16 Total: 0.77 kcal Atomic # 8 Polarization: -9.82 SS G_CDS: -2.17 Total: -11.99 kcal Atomic # 14 Polarization: -0.53 SS G_CDS: 2.04 Total: 1.51 kcal Total: -21.14 -1.02 -22.16 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10970304_15413834.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -82.788 kcal (2) G-P(sol) polarization free energy of solvation -21.142 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -103.929 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.017 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.159 kcal (6) G-S(sol) free energy of system = (1) + (5) -104.946 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.76 seconds