Wall clock time and date at job start Sat Mar 6 2021 15:35:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45199 * 1 3 3 C 1.34227 * 117.00002 * 2 1 4 4 O 1.20827 * 120.00118 * 359.97438 * 3 2 1 5 5 C 1.50702 * 119.99611 * 179.97438 * 3 2 1 6 6 H 1.08997 * 112.84937 * 48.80789 * 5 3 2 7 7 C 1.53784 * 113.61130 * 179.97438 * 5 3 2 8 8 C 1.53786 * 87.07929 * 140.06655 * 7 5 3 9 9 H 1.08995 * 113.61533 * 89.19987 * 8 7 5 10 10 N 1.46506 * 113.61424 * 220.02211 * 8 7 5 11 11 C 1.34769 * 119.99651 * 204.99879 * 10 8 7 12 12 O 1.21278 * 120.00676 * 359.97438 * 11 10 8 13 13 C 1.50701 * 119.99670 * 179.97438 * 11 10 8 14 14 C 1.53046 * 109.33058 * 180.02562 * 13 11 10 15 15 C 1.53542 * 108.56276 * 169.83134 * 14 13 11 16 16 N 1.47031 * 107.65953 * 299.05085 * 15 14 13 17 17 C 1.38920 * 118.88081 * 43.66251 * 16 15 14 18 18 C 1.31109 * 121.85500 * 346.68682 * 17 16 15 19 19 C 1.50703 * 118.55280 * 180.42823 * 18 17 16 20 20 O 1.42896 * 109.46999 * 249.97742 * 19 18 17 21 21 Si 1.86305 * 109.46689 * 9.97973 * 19 18 17 22 22 C 1.53780 * 87.08123 * 334.56618 * 8 7 5 23 23 H 1.09005 * 109.47693 * 179.97438 * 1 2 3 24 24 H 1.08993 * 109.47631 * 300.00159 * 1 2 3 25 25 H 1.09008 * 109.47132 * 60.00109 * 1 2 3 26 26 H 1.09001 * 113.61452 * 25.51876 * 7 5 3 27 27 H 1.08996 * 113.61568 * 254.61122 * 7 5 3 28 28 H 0.97006 * 119.99734 * 24.99653 * 10 8 7 29 29 H 1.09000 * 109.19060 * 60.43186 * 13 11 10 30 30 H 1.08998 * 109.61776 * 289.55158 * 14 13 11 31 31 H 1.08992 * 109.61978 * 50.10868 * 14 13 11 32 32 H 1.09007 * 109.82101 * 58.58878 * 15 14 13 33 33 H 1.09001 * 109.82330 * 179.50854 * 15 14 13 34 34 H 0.97000 * 120.55609 * 223.64348 * 16 15 14 35 35 H 1.08010 * 119.07472 * 166.68671 * 17 16 15 36 36 H 1.09000 * 109.47055 * 129.97314 * 19 18 17 37 37 H 0.96705 * 113.99648 * 60.00371 * 20 19 18 38 38 H 1.48494 * 110.00155 * 58.67970 * 21 19 18 39 39 H 1.48496 * 109.99536 * 180.02562 * 21 19 18 40 40 H 1.09001 * 113.61479 * 139.97669 * 22 8 7 41 41 H 1.08997 * 113.61821 * 270.88690 * 22 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 -0.0005 5 6 3.5663 1.2747 0.0006 6 1 4.0239 0.6361 -0.7549 7 6 4.1078 2.7141 -0.0001 8 6 5.1821 2.2268 0.9865 9 1 6.0819 1.8494 0.5009 10 7 5.4721 3.1831 2.0578 11 6 6.6706 3.1618 2.6737 12 8 7.5089 2.3507 2.3416 13 6 6.9693 4.1459 3.7753 14 6 8.3876 3.9063 4.2979 15 6 8.7676 5.0659 5.2298 16 7 8.7254 6.3052 4.4397 17 6 7.6610 6.5112 3.5711 18 6 6.8393 5.5440 3.2418 19 6 5.7151 5.8481 2.2854 20 8 4.4702 5.8094 2.9858 21 14 5.9638 7.5435 1.5539 22 6 4.1925 1.1236 1.3970 23 1 -0.3635 -1.0277 -0.0005 24 1 -0.3634 0.5138 0.8899 25 1 -0.3634 0.5139 -0.8901 26 1 3.4178 3.4404 0.4294 27 1 4.5100 3.0288 -0.9630 28 1 4.8015 3.8316 2.3237 29 1 6.2562 4.0022 4.5871 30 1 8.4204 2.9671 4.8502 31 1 9.0843 3.8662 3.4607 32 1 8.0551 5.1277 6.0525 33 1 9.7730 4.9113 5.6213 34 1 9.4287 6.9679 4.5238 35 1 7.5059 7.4959 3.1552 36 1 5.7063 5.1058 1.4872 37 1 4.4074 6.4454 3.7116 38 1 7.2697 7.6063 0.8498 39 1 4.8613 7.8556 0.6094 40 1 4.6629 0.1542 1.5619 41 1 3.5256 1.4150 2.2084 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10970304_15608500.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:35:58 Heat of formation + Delta-G solvation = -93.890905 kcal Electronic energy + Delta-G solvation = -25136.937216 eV Core-core repulsion = 21406.109216 eV Total energy + Delta-G solvation = -3730.828000 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 297.145 amu Computer time = 0.63 seconds Orbital eigenvalues (eV) -41.99462 -41.33436 -39.79226 -38.70484 -37.70860 -37.23122 -34.51014 -33.29056 -32.74573 -29.38022 -27.61009 -26.95875 -26.78158 -25.54077 -23.34400 -22.51944 -21.56124 -20.68724 -19.37560 -18.97999 -18.84820 -17.94541 -17.87736 -17.33915 -17.26866 -16.85250 -16.31010 -16.14666 -15.90139 -15.39393 -15.12850 -14.90788 -14.57908 -14.42250 -14.14302 -14.08130 -13.91929 -13.60610 -13.34219 -13.21318 -12.97844 -12.76889 -12.46825 -12.27445 -12.15730 -11.96753 -11.86121 -11.75655 -11.73985 -11.44801 -11.29530 -10.62207 -10.35375 -9.84192 -8.56987 -5.05888 1.16313 1.20825 1.31226 1.62815 1.71245 1.81441 2.01194 2.39191 2.49116 3.24088 3.31552 3.40088 3.61124 3.66854 3.73751 3.76792 3.92855 4.03548 4.19266 4.19976 4.22154 4.27114 4.33684 4.46432 4.50468 4.55537 4.61127 4.62019 4.64259 4.71141 4.77362 4.80170 4.85433 5.12706 5.15248 5.27382 5.35109 5.42634 5.60412 6.18516 6.52515 6.70862 6.73188 6.78639 7.37390 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.357 6.357 3 C 0.472 3.528 4 O -0.503 6.503 5 C -0.108 4.108 6 H 0.131 0.869 7 C -0.130 4.130 8 C 0.120 3.880 9 H 0.122 0.878 10 N -0.721 5.721 11 C 0.526 3.474 12 O -0.541 6.541 13 C -0.037 4.037 14 C -0.121 4.121 15 C 0.120 3.880 16 N -0.748 5.748 17 C 0.162 3.838 18 C -0.285 4.285 19 C -0.068 4.068 20 O -0.551 6.551 21 Si 0.668 3.332 22 C -0.133 4.133 23 H 0.103 0.897 24 H 0.064 0.936 25 H 0.064 0.936 26 H 0.105 0.895 27 H 0.087 0.913 28 H 0.417 0.583 29 H 0.098 0.902 30 H 0.081 0.919 31 H 0.079 0.921 32 H 0.064 0.936 33 H 0.083 0.917 34 H 0.404 0.596 35 H 0.133 0.867 36 H 0.120 0.880 37 H 0.381 0.619 38 H -0.260 1.260 39 H -0.255 1.255 40 H 0.089 0.911 41 H 0.091 0.909 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.664 2.759 3.845 4.779 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.273 6.273 3 C 0.314 3.686 4 O -0.390 6.390 5 C -0.128 4.128 6 H 0.149 0.851 7 C -0.168 4.168 8 C 0.014 3.986 9 H 0.140 0.860 10 N -0.378 5.378 11 C 0.313 3.687 12 O -0.418 6.418 13 C -0.058 4.058 14 C -0.160 4.160 15 C -0.004 4.004 16 N -0.377 5.377 17 C 0.040 3.960 18 C -0.296 4.296 19 C -0.179 4.179 20 O -0.357 6.357 21 Si 0.571 3.429 22 C -0.171 4.171 23 H 0.121 0.879 24 H 0.082 0.918 25 H 0.082 0.918 26 H 0.123 0.877 27 H 0.105 0.895 28 H 0.258 0.742 29 H 0.116 0.884 30 H 0.099 0.901 31 H 0.098 0.902 32 H 0.082 0.918 33 H 0.102 0.898 34 H 0.238 0.762 35 H 0.150 0.850 36 H 0.137 0.863 37 H 0.230 0.770 38 H -0.185 1.185 39 H -0.180 1.180 40 H 0.108 0.892 41 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges 1.009 2.371 2.534 3.614 hybrid contribution -0.350 -0.078 -0.023 0.359 sum 0.659 2.293 2.511 3.464 Atomic orbital electron populations 1.23319 0.75997 1.03973 1.02698 1.86519 1.23678 1.33306 1.83829 1.23483 0.91578 0.81423 0.72099 1.90688 1.66949 1.36408 1.44994 1.22308 0.87676 1.00948 1.01864 0.85127 1.23408 0.97413 0.95052 1.00886 1.22431 0.97596 0.89912 0.88613 0.85974 1.46609 1.17094 1.36956 1.37120 1.20645 0.81394 0.84002 0.82687 1.90695 1.46676 1.39499 1.64904 1.19673 0.98854 0.91171 0.96084 1.21742 0.95459 0.98391 1.00416 1.21657 1.02049 0.83601 0.93136 1.44613 1.25299 1.22496 1.45324 1.20332 0.88181 0.96476 0.91017 1.20525 1.04459 0.94227 1.10414 1.25140 0.84002 1.11260 0.97537 1.86325 1.34411 1.64073 1.50859 0.95353 0.80261 0.81188 0.86136 1.23435 0.98019 1.01134 0.94554 0.87866 0.91763 0.91758 0.87710 0.89484 0.74189 0.88389 0.90060 0.90181 0.91808 0.89842 0.76160 0.84980 0.86325 0.77024 1.18481 1.18011 0.89243 0.89011 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.00 10.56 101.05 1.07 1.07 16 2 O -0.36 -0.79 10.56 -39.25 -0.41 -1.20 16 3 C 0.47 1.28 7.49 36.01 0.27 1.55 16 4 O -0.50 -2.74 15.65 -18.75 -0.29 -3.03 16 5 C -0.11 -0.01 4.26 -90.96 -0.39 -0.40 16 6 H 0.13 -0.23 8.14 -51.93 -0.42 -0.65 16 7 C -0.13 -0.03 7.16 -25.91 -0.19 -0.22 16 8 C 0.12 0.09 4.24 -67.11 -0.28 -0.20 16 9 H 0.12 0.17 7.46 -51.93 -0.39 -0.22 16 10 N -0.72 -0.93 3.66 -53.02 -0.19 -1.13 16 11 C 0.53 1.52 6.85 -10.99 -0.08 1.44 16 12 O -0.54 -3.39 15.40 5.56 0.09 -3.30 16 13 C -0.04 -0.02 2.75 -93.14 -0.26 -0.27 16 14 C -0.12 -0.02 4.91 -26.43 -0.13 -0.14 16 15 C 0.12 -0.28 7.16 -3.47 -0.02 -0.30 16 16 N -0.75 1.85 5.83 -60.68 -0.35 1.50 16 17 C 0.16 -0.30 9.61 -16.08 -0.15 -0.46 16 18 C -0.29 0.20 5.03 -101.33 -0.51 -0.31 16 19 C -0.07 0.05 1.69 36.01 0.06 0.11 16 20 O -0.55 0.84 11.40 -35.23 -0.40 0.44 16 21 Si 0.67 -0.79 29.73 -169.99 -5.05 -5.84 16 22 C -0.13 -0.02 7.43 -25.92 -0.19 -0.21 16 23 H 0.10 -0.24 8.14 -51.93 -0.42 -0.66 16 24 H 0.06 0.01 8.13 -51.93 -0.42 -0.41 16 25 H 0.06 0.01 8.13 -51.92 -0.42 -0.41 16 26 H 0.10 0.16 7.41 -51.93 -0.38 -0.22 16 27 H 0.09 -0.06 8.14 -51.93 -0.42 -0.48 16 28 H 0.42 0.30 5.24 -40.82 -0.21 0.09 16 29 H 0.10 -0.05 8.14 -51.93 -0.42 -0.47 16 30 H 0.08 0.01 8.14 -51.93 -0.42 -0.42 16 31 H 0.08 0.19 7.77 -51.93 -0.40 -0.21 16 32 H 0.06 -0.18 8.14 -51.92 -0.42 -0.60 16 33 H 0.08 -0.29 8.14 -51.93 -0.42 -0.71 16 34 H 0.40 -1.72 8.96 -40.82 -0.37 -2.08 16 35 H 0.13 -0.51 4.50 -52.48 -0.24 -0.75 16 36 H 0.12 0.10 5.29 -51.93 -0.27 -0.17 16 37 H 0.38 -1.96 8.70 45.56 0.40 -1.56 16 38 H -0.26 -0.43 7.11 56.52 0.40 -0.03 16 39 H -0.26 -0.62 7.11 56.52 0.40 -0.22 16 40 H 0.09 -0.03 8.14 -51.93 -0.42 -0.45 16 41 H 0.09 0.05 8.10 -51.93 -0.42 -0.37 16 LS Contribution 330.39 15.07 4.98 4.98 Total: 0.00 -8.80 330.39 -8.16 -16.97 By element: Atomic # 1 Polarization: -5.31 SS G_CDS: -5.71 Total: -11.03 kcal Atomic # 6 Polarization: 2.46 SS G_CDS: -0.80 Total: 1.66 kcal Atomic # 7 Polarization: 0.91 SS G_CDS: -0.55 Total: 0.37 kcal Atomic # 8 Polarization: -6.08 SS G_CDS: -1.02 Total: -7.10 kcal Atomic # 14 Polarization: -0.79 SS G_CDS: -5.05 Total: -5.84 kcal Total LS contribution 4.98 Total: 4.98 kcal Total: -8.80 -8.16 -16.97 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10970304_15608500.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -76.925 kcal (2) G-P(sol) polarization free energy of solvation -8.803 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -85.728 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.163 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.966 kcal (6) G-S(sol) free energy of system = (1) + (5) -93.891 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.63 seconds