Wall clock time and date at job start Sat Mar 6 2021 15:35:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45199 * 1 3 3 C 1.34227 * 117.00002 * 2 1 4 4 O 1.20827 * 120.00118 * 359.97438 * 3 2 1 5 5 C 1.50702 * 119.99611 * 179.97438 * 3 2 1 6 6 H 1.08997 * 112.84937 * 48.80789 * 5 3 2 7 7 C 1.53784 * 113.61130 * 179.97438 * 5 3 2 8 8 C 1.53786 * 87.07929 * 140.06655 * 7 5 3 9 9 H 1.08995 * 113.61533 * 89.19987 * 8 7 5 10 10 N 1.46506 * 113.61424 * 220.02211 * 8 7 5 11 11 C 1.34769 * 119.99651 * 204.99879 * 10 8 7 12 12 O 1.21278 * 120.00676 * 359.97438 * 11 10 8 13 13 C 1.50701 * 119.99670 * 179.97438 * 11 10 8 14 14 C 1.53046 * 109.33058 * 180.02562 * 13 11 10 15 15 C 1.53542 * 108.56276 * 169.83134 * 14 13 11 16 16 N 1.47031 * 107.65953 * 299.05085 * 15 14 13 17 17 C 1.38920 * 118.88081 * 43.66251 * 16 15 14 18 18 C 1.31109 * 121.85500 * 346.68682 * 17 16 15 19 19 C 1.50703 * 118.55280 * 180.42823 * 18 17 16 20 20 O 1.42896 * 109.46999 * 249.97742 * 19 18 17 21 21 Si 1.86305 * 109.46689 * 9.97973 * 19 18 17 22 22 C 1.53780 * 87.08123 * 334.56618 * 8 7 5 23 23 H 1.09005 * 109.47693 * 179.97438 * 1 2 3 24 24 H 1.08993 * 109.47631 * 300.00159 * 1 2 3 25 25 H 1.09008 * 109.47132 * 60.00109 * 1 2 3 26 26 H 1.09001 * 113.61452 * 25.51876 * 7 5 3 27 27 H 1.08996 * 113.61568 * 254.61122 * 7 5 3 28 28 H 0.97006 * 119.99734 * 24.99653 * 10 8 7 29 29 H 1.09000 * 109.19060 * 60.43186 * 13 11 10 30 30 H 1.08998 * 109.61776 * 289.55158 * 14 13 11 31 31 H 1.08992 * 109.61978 * 50.10868 * 14 13 11 32 32 H 1.09007 * 109.82101 * 58.58878 * 15 14 13 33 33 H 1.09001 * 109.82330 * 179.50854 * 15 14 13 34 34 H 0.97000 * 120.55609 * 223.64348 * 16 15 14 35 35 H 1.08010 * 119.07472 * 166.68671 * 17 16 15 36 36 H 1.09000 * 109.47055 * 129.97314 * 19 18 17 37 37 H 0.96705 * 113.99648 * 60.00371 * 20 19 18 38 38 H 1.48494 * 110.00155 * 58.67970 * 21 19 18 39 39 H 1.48496 * 109.99536 * 180.02562 * 21 19 18 40 40 H 1.09001 * 113.61479 * 139.97669 * 22 8 7 41 41 H 1.08997 * 113.61821 * 270.88690 * 22 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 -0.0005 5 6 3.5663 1.2747 0.0006 6 1 4.0239 0.6361 -0.7549 7 6 4.1078 2.7141 -0.0001 8 6 5.1821 2.2268 0.9865 9 1 6.0819 1.8494 0.5009 10 7 5.4721 3.1831 2.0578 11 6 6.6706 3.1618 2.6737 12 8 7.5089 2.3507 2.3416 13 6 6.9693 4.1459 3.7753 14 6 8.3876 3.9063 4.2979 15 6 8.7676 5.0659 5.2298 16 7 8.7254 6.3052 4.4397 17 6 7.6610 6.5112 3.5711 18 6 6.8393 5.5440 3.2418 19 6 5.7151 5.8481 2.2854 20 8 4.4702 5.8094 2.9858 21 14 5.9638 7.5435 1.5539 22 6 4.1925 1.1236 1.3970 23 1 -0.3635 -1.0277 -0.0005 24 1 -0.3634 0.5138 0.8899 25 1 -0.3634 0.5139 -0.8901 26 1 3.4178 3.4404 0.4294 27 1 4.5100 3.0288 -0.9630 28 1 4.8015 3.8316 2.3237 29 1 6.2562 4.0022 4.5871 30 1 8.4204 2.9671 4.8502 31 1 9.0843 3.8662 3.4607 32 1 8.0551 5.1277 6.0525 33 1 9.7730 4.9113 5.6213 34 1 9.4287 6.9679 4.5238 35 1 7.5059 7.4959 3.1552 36 1 5.7063 5.1058 1.4872 37 1 4.4074 6.4454 3.7116 38 1 7.2697 7.6063 0.8498 39 1 4.8613 7.8556 0.6094 40 1 4.6629 0.1542 1.5619 41 1 3.5256 1.4150 2.2084 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10970304_15608500.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:35:57 Heat of formation + Delta-G solvation = -95.018747 kcal Electronic energy + Delta-G solvation = -25136.986123 eV Core-core repulsion = 21406.109216 eV Total energy + Delta-G solvation = -3730.876907 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 297.145 amu Computer time = 0.72 seconds Orbital eigenvalues (eV) -42.13497 -41.45218 -39.81911 -38.82890 -37.63200 -37.42663 -34.66138 -33.25286 -32.65152 -29.45606 -27.61006 -26.98113 -26.78946 -25.51888 -23.27917 -22.62989 -21.70978 -20.77158 -19.29014 -19.00607 -18.89399 -18.08749 -18.00205 -17.49499 -17.17250 -16.90374 -16.36292 -16.18375 -15.87437 -15.43649 -15.15728 -14.88106 -14.53932 -14.48599 -14.27210 -14.15801 -13.95459 -13.67073 -13.43080 -13.19684 -13.04357 -12.71114 -12.49055 -12.38006 -12.23346 -11.96174 -11.92393 -11.88828 -11.79876 -11.48409 -11.34643 -10.79749 -10.30541 -9.97097 -8.43282 -5.02062 1.00617 1.23372 1.36398 1.61534 1.62966 1.67446 2.01435 2.31500 2.68254 3.17278 3.25903 3.47826 3.59567 3.68853 3.72538 3.89075 3.91128 4.00026 4.21262 4.23216 4.25423 4.33401 4.38267 4.44761 4.50522 4.56790 4.57702 4.65127 4.71381 4.75639 4.80553 4.82456 4.86622 5.06605 5.21288 5.27253 5.28281 5.45223 5.48567 6.32762 6.48267 6.60141 6.92783 6.98980 7.21447 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.362 6.362 3 C 0.471 3.529 4 O -0.536 6.536 5 C -0.102 4.102 6 H 0.154 0.846 7 C -0.125 4.125 8 C 0.116 3.884 9 H 0.116 0.884 10 N -0.714 5.714 11 C 0.520 3.480 12 O -0.582 6.582 13 C -0.034 4.034 14 C -0.120 4.120 15 C 0.123 3.877 16 N -0.745 5.745 17 C 0.170 3.830 18 C -0.303 4.303 19 C -0.067 4.067 20 O -0.559 6.559 21 Si 0.762 3.238 22 C -0.126 4.126 23 H 0.129 0.871 24 H 0.061 0.939 25 H 0.061 0.939 26 H 0.091 0.909 27 H 0.096 0.904 28 H 0.420 0.580 29 H 0.108 0.892 30 H 0.077 0.923 31 H 0.053 0.947 32 H 0.075 0.925 33 H 0.098 0.902 34 H 0.414 0.586 35 H 0.154 0.846 36 H 0.100 0.900 37 H 0.399 0.601 38 H -0.296 1.296 39 H -0.306 1.306 40 H 0.096 0.904 41 H 0.086 0.914 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.822 3.204 4.737 5.778 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.278 6.278 3 C 0.316 3.684 4 O -0.426 6.426 5 C -0.122 4.122 6 H 0.172 0.828 7 C -0.163 4.163 8 C 0.011 3.989 9 H 0.134 0.866 10 N -0.370 5.370 11 C 0.308 3.692 12 O -0.462 6.462 13 C -0.055 4.055 14 C -0.159 4.159 15 C -0.001 4.001 16 N -0.375 5.375 17 C 0.046 3.954 18 C -0.314 4.314 19 C -0.179 4.179 20 O -0.368 6.368 21 Si 0.670 3.330 22 C -0.165 4.165 23 H 0.147 0.853 24 H 0.080 0.920 25 H 0.080 0.920 26 H 0.110 0.890 27 H 0.115 0.885 28 H 0.262 0.738 29 H 0.126 0.874 30 H 0.096 0.904 31 H 0.072 0.928 32 H 0.093 0.907 33 H 0.116 0.884 34 H 0.251 0.749 35 H 0.170 0.830 36 H 0.117 0.883 37 H 0.250 0.750 38 H -0.224 1.224 39 H -0.235 1.235 40 H 0.115 0.885 41 H 0.105 0.895 Dipole moment (debyes) X Y Z Total from point charges 1.158 2.818 3.472 4.619 hybrid contribution -0.441 -0.235 -0.341 0.605 sum 0.717 2.583 3.131 4.122 Atomic orbital electron populations 1.23541 0.74963 1.05660 1.02480 1.86519 1.24832 1.32989 1.83465 1.23930 0.92397 0.81084 0.71019 1.90671 1.67828 1.37404 1.46665 1.22412 0.86165 1.01139 1.02438 0.82847 1.23347 0.96844 0.95019 1.01119 1.22453 0.97510 0.90226 0.88739 0.86602 1.46620 1.16772 1.36799 1.36810 1.21169 0.81141 0.83854 0.82998 1.90666 1.47855 1.41264 1.66393 1.19692 0.99195 0.91204 0.95421 1.21703 0.94741 0.99540 0.99949 1.21684 1.03210 0.82560 0.92655 1.44700 1.25310 1.22606 1.44848 1.20572 0.87505 0.96980 0.90302 1.20425 1.05432 0.93908 1.11626 1.25093 0.84481 1.10922 0.97388 1.86291 1.33932 1.64980 1.51619 0.94416 0.75579 0.79142 0.83880 1.23378 0.97538 1.01156 0.94429 0.85267 0.92031 0.91986 0.89010 0.88493 0.73773 0.87423 0.90426 0.92793 0.90687 0.88363 0.74910 0.82998 0.88291 0.75004 1.22360 1.23483 0.88543 0.89518 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.01 10.56 113.37 1.20 1.20 16 2 O -0.36 -1.64 10.56 -51.38 -0.54 -2.18 16 3 C 0.47 2.83 7.49 71.24 0.53 3.36 16 4 O -0.54 -6.46 15.65 21.96 0.34 -6.12 16 5 C -0.10 -0.05 4.26 -11.01 -0.05 -0.10 16 6 H 0.15 -0.64 8.14 -2.39 -0.02 -0.66 16 7 C -0.13 -0.17 7.16 31.12 0.22 0.05 16 8 C 0.12 0.30 4.24 45.52 0.19 0.49 16 9 H 0.12 0.48 7.46 -2.39 -0.02 0.46 16 10 N -0.71 -2.75 3.66 -440.04 -1.61 -4.36 16 11 C 0.52 3.73 6.85 87.66 0.60 4.33 16 12 O -0.58 -8.44 15.40 -3.02 -0.05 -8.48 16 13 C -0.03 -0.05 2.75 -12.42 -0.03 -0.08 16 14 C -0.12 -0.10 4.91 30.79 0.15 0.05 16 15 C 0.12 -0.68 7.16 86.46 0.62 -0.07 16 16 N -0.74 4.62 5.83 -345.88 -2.02 2.61 16 17 C 0.17 -0.80 9.61 83.42 0.80 0.00 16 18 C -0.30 0.45 5.03 -16.75 -0.08 0.37 16 19 C -0.07 0.08 1.69 71.24 0.12 0.20 16 20 O -0.56 1.76 11.40 -148.98 -1.70 0.07 16 21 Si 0.76 -1.63 29.73 68.60 2.04 0.41 16 22 C -0.13 -0.10 7.43 31.12 0.23 0.13 16 23 H 0.13 -0.70 8.14 -2.38 -0.02 -0.72 16 24 H 0.06 0.05 8.13 -2.39 -0.02 0.03 16 25 H 0.06 0.05 8.13 -2.38 -0.02 0.03 16 26 H 0.09 0.41 7.41 -2.39 -0.02 0.40 16 27 H 0.10 -0.07 8.14 -2.39 -0.02 -0.09 16 28 H 0.42 1.05 5.24 -92.70 -0.49 0.56 16 29 H 0.11 -0.11 8.14 -2.39 -0.02 -0.13 16 30 H 0.08 0.09 8.14 -2.39 -0.02 0.07 16 31 H 0.05 0.34 7.77 -2.39 -0.02 0.32 16 32 H 0.07 -0.53 8.14 -2.38 -0.02 -0.55 16 33 H 0.10 -0.81 8.14 -2.39 -0.02 -0.83 16 34 H 0.41 -4.20 8.96 -92.71 -0.83 -5.03 16 35 H 0.15 -1.41 4.50 -2.91 -0.01 -1.42 16 36 H 0.10 0.28 5.29 -2.39 -0.01 0.27 16 37 H 0.40 -4.48 8.70 -74.05 -0.64 -5.12 16 38 H -0.30 -1.14 7.11 99.48 0.71 -0.43 16 39 H -0.31 -1.97 7.11 99.48 0.71 -1.26 16 40 H 0.10 -0.04 8.14 -2.39 -0.02 -0.06 16 41 H 0.09 0.17 8.10 -2.39 -0.02 0.15 16 Total: 0.00 -22.30 330.39 0.13 -22.16 By element: Atomic # 1 Polarization: -13.20 SS G_CDS: -0.84 Total: -14.04 kcal Atomic # 6 Polarization: 5.43 SS G_CDS: 4.50 Total: 9.93 kcal Atomic # 7 Polarization: 1.87 SS G_CDS: -3.62 Total: -1.76 kcal Atomic # 8 Polarization: -14.77 SS G_CDS: -1.94 Total: -16.71 kcal Atomic # 14 Polarization: -1.63 SS G_CDS: 2.04 Total: 0.41 kcal Total: -22.30 0.13 -22.16 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10970304_15608500.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -72.855 kcal (2) G-P(sol) polarization free energy of solvation -22.297 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -95.152 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.133 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.164 kcal (6) G-S(sol) free energy of system = (1) + (5) -95.019 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.72 seconds