Wall clock time and date at job start Sat Mar 6 2021 15:36:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45209 * 1 3 3 C 1.34232 * 116.99772 * 2 1 4 4 O 1.20819 * 119.99731 * 359.97438 * 3 2 1 5 5 C 1.50697 * 119.99497 * 179.97438 * 3 2 1 6 6 H 1.09002 * 112.84630 * 48.80850 * 5 3 2 7 7 C 1.53786 * 113.61366 * 179.97438 * 5 3 2 8 8 C 1.53780 * 87.07930 * 140.06696 * 7 5 3 9 9 H 1.08998 * 113.61138 * 89.20767 * 8 7 5 10 10 N 1.46499 * 113.61171 * 220.01974 * 8 7 5 11 11 C 1.34771 * 119.99941 * 203.46908 * 10 8 7 12 12 O 1.21626 * 119.99894 * 0.02562 * 11 10 8 13 13 C 1.47265 * 120.00326 * 179.97438 * 11 10 8 14 14 C 1.36336 * 126.97200 * 180.02562 * 13 11 10 15 15 C 1.51001 * 126.78974 * 0.03100 * 14 13 11 16 16 C 1.53390 * 108.25245 * 164.33673 * 15 14 13 17 17 C 1.53161 * 109.05001 * 48.45742 * 16 15 14 18 18 C 1.53140 * 109.52117 * 290.42655 * 17 16 15 19 19 N 1.35217 * 108.66084 * 179.76766 * 14 13 11 20 20 C 1.36421 * 109.89563 * 0.40542 * 19 14 13 21 21 C 1.50701 * 125.48910 * 179.85357 * 20 19 14 22 22 O 1.42896 * 109.47417 * 29.71780 * 21 20 19 23 23 Si 1.86301 * 109.47149 * 149.71796 * 21 20 19 24 24 C 1.34497 * 109.01709 * 359.58717 * 20 19 14 25 25 C 1.53783 * 87.17386 * 334.60983 * 8 7 5 26 26 H 1.09001 * 109.47061 * 59.99962 * 1 2 3 27 27 H 1.09000 * 109.47309 * 179.97438 * 1 2 3 28 28 H 1.08999 * 109.47043 * 300.00117 * 1 2 3 29 29 H 1.09007 * 113.60857 * 25.52253 * 7 5 3 30 30 H 1.08995 * 113.61627 * 254.62360 * 7 5 3 31 31 H 0.96996 * 120.00167 * 23.47996 * 10 8 7 32 32 H 1.09001 * 109.70710 * 284.02571 * 15 14 13 33 33 H 1.09001 * 109.70888 * 44.64584 * 15 14 13 34 34 H 1.09004 * 109.54392 * 168.32784 * 16 15 14 35 35 H 1.09003 * 109.54402 * 288.58835 * 16 15 14 36 36 H 1.08997 * 109.46042 * 50.43706 * 17 16 15 37 37 H 1.08997 * 109.46452 * 170.41029 * 17 16 15 38 38 H 1.09000 * 109.56326 * 170.82746 * 18 17 16 39 39 H 1.08998 * 109.56516 * 291.06134 * 18 17 16 40 40 H 1.09002 * 109.47060 * 269.71806 * 21 20 19 41 41 H 0.96708 * 114.00101 * 59.99427 * 22 21 20 42 42 H 1.48493 * 110.00101 * 179.97438 * 23 21 20 43 43 H 1.48502 * 109.99925 * 301.31801 * 23 21 20 44 44 H 1.07995 * 126.81850 * 180.23400 * 24 20 19 45 45 H 1.08999 * 113.60958 * 139.93715 * 25 8 7 46 46 H 1.08995 * 113.62017 * 270.83934 * 25 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4521 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 -0.0005 5 6 3.5664 1.2748 0.0006 6 1 4.0239 0.6362 -0.7550 7 6 4.1078 2.7142 -0.0001 8 6 5.1821 2.2269 0.9865 9 1 6.0820 1.8496 0.5008 10 7 5.4722 3.1832 2.0576 11 6 6.6591 3.1420 2.6946 12 8 7.4897 2.3110 2.3798 13 6 6.9511 4.1036 3.7710 14 6 8.0969 4.1902 4.5048 15 6 9.3222 3.3173 4.3746 16 6 10.4829 4.0072 5.1023 17 6 10.0118 4.4450 6.4923 18 6 9.0077 5.5930 6.3542 19 7 7.9698 5.2068 5.3871 20 6 6.7441 5.7899 5.2502 21 6 6.2333 6.9532 6.0607 22 8 7.3321 7.7750 6.4597 23 14 5.0500 7.9566 5.0293 24 6 6.0674 5.1630 4.2715 25 6 4.1945 1.1221 1.3978 26 1 -0.3633 0.5138 -0.8900 27 1 -0.3634 -1.0276 -0.0005 28 1 -0.3633 0.5138 0.8900 29 1 3.4177 3.4405 0.4295 30 1 4.5098 3.0290 -0.9631 31 1 4.8099 3.8460 2.3086 32 1 9.1304 2.3447 4.8277 33 1 9.5725 3.1899 3.3214 34 1 11.3159 3.3111 5.2022 35 1 10.8022 4.8806 4.5337 36 1 9.5350 3.6041 6.9958 37 1 10.8684 4.7801 7.0772 38 1 8.5505 5.7965 7.3226 39 1 9.5210 6.4861 5.9979 40 1 5.7179 6.5808 6.9460 41 1 7.8376 8.1417 5.7213 42 1 4.5385 9.1066 5.8174 43 1 5.7319 8.4436 3.8033 44 1 5.0715 5.3934 3.9232 45 1 4.6667 0.1534 1.5617 46 1 3.5283 1.4122 2.2102 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10970304_16915396.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:36:01 Heat of formation + Delta-G solvation = -85.776240 kcal Electronic energy + Delta-G solvation = -29245.692200 eV Core-core repulsion = 25103.226178 eV Total energy + Delta-G solvation = -4142.466022 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 335.161 amu Computer time = 0.87 seconds Orbital eigenvalues (eV) -42.77113 -41.82468 -40.39296 -38.85206 -38.11646 -37.23794 -36.91598 -34.28738 -33.45028 -31.19504 -29.78033 -29.11445 -27.05735 -26.82972 -26.38307 -24.67516 -24.01143 -22.18932 -21.75356 -21.13678 -20.60810 -19.62193 -18.90007 -18.75246 -17.84154 -17.32987 -17.26579 -17.05697 -16.65677 -16.29010 -16.16461 -15.81394 -15.54577 -15.41395 -15.24520 -15.14407 -14.72062 -14.64763 -14.37736 -14.24862 -14.08702 -13.86773 -13.59095 -13.42541 -13.24633 -12.97248 -12.76162 -12.45787 -12.43100 -12.25818 -12.15257 -12.07435 -11.90918 -11.79444 -11.75778 -11.73950 -11.28842 -10.95652 -10.64373 -9.94363 -9.54630 -8.99461 -5.02347 0.85123 0.99721 1.21211 1.41350 1.59549 1.68908 1.76709 1.99482 2.52268 2.68300 3.08442 3.27031 3.35060 3.42365 3.51117 3.61367 3.71215 3.75142 3.76594 3.77418 4.01830 4.17689 4.19781 4.20657 4.27165 4.30537 4.37271 4.42125 4.52846 4.54961 4.58211 4.62524 4.64979 4.67362 4.72500 4.79601 4.82608 4.87774 4.89520 5.02560 5.12305 5.14979 5.23688 5.43146 5.63775 5.76270 6.02776 6.21564 6.23078 6.73462 6.78709 7.50601 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.357 6.357 3 C 0.472 3.528 4 O -0.505 6.505 5 C -0.110 4.110 6 H 0.130 0.870 7 C -0.127 4.127 8 C 0.130 3.870 9 H 0.123 0.877 10 N -0.717 5.717 11 C 0.597 3.403 12 O -0.548 6.548 13 C -0.235 4.235 14 C 0.121 3.879 15 C -0.056 4.056 16 C -0.129 4.129 17 C -0.139 4.139 18 C 0.108 3.892 19 N -0.428 5.428 20 C -0.012 4.012 21 C -0.050 4.050 22 O -0.534 6.534 23 Si 0.710 3.290 24 C -0.162 4.162 25 C -0.133 4.133 26 H 0.064 0.936 27 H 0.103 0.897 28 H 0.064 0.936 29 H 0.103 0.897 30 H 0.087 0.913 31 H 0.403 0.597 32 H 0.089 0.911 33 H 0.100 0.900 34 H 0.080 0.920 35 H 0.068 0.932 36 H 0.075 0.925 37 H 0.088 0.912 38 H 0.096 0.904 39 H 0.082 0.918 40 H 0.121 0.879 41 H 0.376 0.624 42 H -0.255 1.255 43 H -0.256 1.256 44 H 0.153 0.847 45 H 0.089 0.911 46 H 0.091 0.909 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.511 -0.256 1.042 1.188 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.273 6.273 3 C 0.315 3.685 4 O -0.393 6.393 5 C -0.130 4.130 6 H 0.148 0.852 7 C -0.165 4.165 8 C 0.024 3.976 9 H 0.140 0.860 10 N -0.368 5.368 11 C 0.386 3.614 12 O -0.427 6.427 13 C -0.245 4.245 14 C 0.003 3.997 15 C -0.093 4.093 16 C -0.167 4.167 17 C -0.177 4.177 18 C -0.013 4.013 19 N -0.104 5.104 20 C -0.121 4.121 21 C -0.160 4.160 22 O -0.340 6.340 23 Si 0.608 3.392 24 C -0.186 4.186 25 C -0.172 4.172 26 H 0.082 0.918 27 H 0.121 0.879 28 H 0.082 0.918 29 H 0.121 0.879 30 H 0.106 0.894 31 H 0.238 0.762 32 H 0.107 0.893 33 H 0.118 0.882 34 H 0.098 0.902 35 H 0.086 0.914 36 H 0.094 0.906 37 H 0.107 0.893 38 H 0.115 0.885 39 H 0.100 0.900 40 H 0.138 0.862 41 H 0.224 0.776 42 H -0.179 1.179 43 H -0.180 1.180 44 H 0.170 0.830 45 H 0.107 0.893 46 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges -0.294 0.229 1.318 1.370 hybrid contribution 0.411 0.660 0.132 0.788 sum 0.117 0.889 1.450 1.705 Atomic orbital electron populations 1.23317 0.76012 1.03972 1.02677 1.86527 1.23662 1.33352 1.83792 1.23503 0.91611 0.81387 0.71993 1.90676 1.66988 1.36434 1.45159 1.22354 0.87562 1.01090 1.01958 0.85170 1.23380 0.97265 0.94831 1.01002 1.22357 0.97561 0.89547 0.88132 0.85953 1.45683 1.17688 1.36179 1.37238 1.17333 0.81142 0.82484 0.80401 1.90764 1.46943 1.38570 1.66423 1.19818 0.96452 1.03704 1.04518 1.20396 0.96784 0.90915 0.91568 1.20521 0.88927 0.96683 1.03199 1.21728 0.98364 1.01333 0.95250 1.21945 0.98976 0.98194 0.98586 1.22108 0.88172 0.98317 0.92699 1.43860 1.13090 1.25246 1.28239 1.20671 0.87335 1.01213 1.02835 1.24815 0.95068 0.91246 1.04855 1.86585 1.43754 1.67136 1.36489 0.94543 0.84703 0.81799 0.78112 1.21650 0.99675 0.98297 0.98973 1.23491 0.98045 1.01303 0.94406 0.91762 0.87901 0.91765 0.87857 0.89387 0.76243 0.89285 0.88155 0.90155 0.91352 0.90631 0.89323 0.88545 0.89976 0.86160 0.77605 1.17927 1.18048 0.82965 0.89277 0.89021 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.56 101.05 1.07 1.05 16 2 O -0.36 -0.51 10.57 -39.26 -0.41 -0.93 16 3 C 0.47 0.77 7.49 36.00 0.27 1.04 16 4 O -0.51 -2.11 15.65 -18.74 -0.29 -2.41 16 5 C -0.11 0.12 4.26 -90.87 -0.39 -0.27 16 6 H 0.13 -0.35 8.14 -51.93 -0.42 -0.77 16 7 C -0.13 0.18 7.15 -25.92 -0.19 -0.01 16 8 C 0.13 -0.08 4.21 -67.12 -0.28 -0.36 16 9 H 0.12 0.04 7.50 -51.93 -0.39 -0.35 16 10 N -0.72 -0.03 5.36 -54.14 -0.29 -0.32 16 11 C 0.60 1.75 7.81 -12.59 -0.10 1.65 16 12 O -0.55 -3.18 14.95 5.25 0.08 -3.10 16 13 C -0.24 -0.53 6.28 -103.48 -0.65 -1.18 16 14 C 0.12 0.25 6.57 -81.64 -0.54 -0.29 16 15 C -0.06 -0.06 5.32 -27.53 -0.15 -0.20 16 16 C -0.13 0.15 5.98 -26.45 -0.16 -0.01 16 17 C -0.14 0.26 5.92 -26.58 -0.16 0.10 16 18 C 0.11 -0.13 5.32 -3.68 -0.02 -0.15 16 19 N -0.43 -0.31 3.11 -107.36 -0.33 -0.64 16 20 C -0.01 0.00 6.15 -81.87 -0.50 -0.51 16 21 C -0.05 0.06 2.99 36.01 0.11 0.16 16 22 O -0.53 0.24 10.68 -35.23 -0.38 -0.13 16 23 Si 0.71 -1.24 31.11 -169.99 -5.29 -6.53 16 24 C -0.16 0.00 9.09 -37.47 -0.34 -0.35 16 25 C -0.13 0.13 7.45 -25.83 -0.19 -0.06 16 26 H 0.06 -0.03 8.13 -51.93 -0.42 -0.46 16 27 H 0.10 -0.29 8.14 -51.93 -0.42 -0.72 16 28 H 0.06 -0.04 8.13 -51.93 -0.42 -0.46 16 29 H 0.10 -0.09 7.41 -51.93 -0.38 -0.47 16 30 H 0.09 -0.18 8.14 -51.93 -0.42 -0.61 16 31 H 0.40 -0.82 7.84 -40.82 -0.32 -1.14 16 32 H 0.09 0.11 8.14 -51.93 -0.42 -0.31 16 33 H 0.10 0.22 7.40 -51.93 -0.38 -0.17 16 34 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 35 H 0.07 -0.07 8.12 -51.93 -0.42 -0.49 16 36 H 0.07 -0.09 8.11 -51.93 -0.42 -0.51 16 37 H 0.09 -0.28 8.14 -51.93 -0.42 -0.70 16 38 H 0.10 -0.10 7.70 -51.93 -0.40 -0.50 16 39 H 0.08 -0.17 7.94 -51.93 -0.41 -0.58 16 40 H 0.12 -0.21 7.96 -51.93 -0.41 -0.62 16 41 H 0.38 -0.98 8.64 45.56 0.39 -0.59 16 42 H -0.25 -0.34 7.11 56.52 0.40 0.06 16 43 H -0.26 -0.24 7.11 56.52 0.40 0.16 16 44 H 0.15 -0.47 6.52 -52.49 -0.34 -0.81 16 45 H 0.09 -0.09 8.14 -51.93 -0.42 -0.51 16 46 H 0.09 -0.07 8.10 -51.93 -0.42 -0.49 16 LS Contribution 374.69 15.07 5.65 5.65 Total: 0.00 -9.01 374.69 -10.40 -19.41 By element: Atomic # 1 Polarization: -4.71 SS G_CDS: -6.92 Total: -11.63 kcal Atomic # 6 Polarization: 2.84 SS G_CDS: -2.21 Total: 0.63 kcal Atomic # 7 Polarization: -0.34 SS G_CDS: -0.62 Total: -0.96 kcal Atomic # 8 Polarization: -5.56 SS G_CDS: -1.01 Total: -6.57 kcal Atomic # 14 Polarization: -1.24 SS G_CDS: -5.29 Total: -6.53 kcal Total LS contribution 5.65 Total: 5.65 kcal Total: -9.01 -10.40 -19.41 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10970304_16915396.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -66.364 kcal (2) G-P(sol) polarization free energy of solvation -9.009 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -75.374 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.403 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.412 kcal (6) G-S(sol) free energy of system = (1) + (5) -85.776 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.87 seconds