Wall clock time and date at job start Sat Mar 6 2021 15:36:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45191 * 1 3 3 C 1.34232 * 117.00249 * 2 1 4 4 O 1.20821 * 119.99316 * 0.02562 * 3 2 1 5 5 C 1.50703 * 120.00267 * 180.02562 * 3 2 1 6 6 H 1.08995 * 112.90186 * 48.74937 * 5 3 2 7 7 C 1.53774 * 113.61528 * 180.02562 * 5 3 2 8 8 C 1.53781 * 87.08199 * 139.98242 * 7 5 3 9 9 H 1.08994 * 113.61336 * 89.19971 * 8 7 5 10 10 N 1.46502 * 113.61525 * 220.02100 * 8 7 5 11 11 C 1.34773 * 120.00212 * 203.47188 * 10 8 7 12 12 O 1.21281 * 119.99549 * 359.97438 * 11 10 8 13 13 C 1.50696 * 120.00229 * 180.02562 * 11 10 8 14 14 O 1.42899 * 109.47131 * 179.97438 * 13 11 10 15 15 C 1.35905 * 116.99807 * 179.97438 * 14 13 11 16 16 C 1.38713 * 120.05278 * 180.02562 * 15 14 13 17 17 C 1.50700 * 120.02762 * 359.97438 * 16 15 14 18 18 O 1.42896 * 109.47341 * 284.72495 * 17 16 15 19 19 Si 1.86300 * 109.46849 * 164.72381 * 17 16 15 20 20 C 1.38160 * 119.94222 * 179.72616 * 16 15 14 21 21 C 1.38247 * 120.05625 * 0.26942 * 20 16 15 22 22 C 1.38286 * 120.10964 * 359.97438 * 21 20 16 23 23 C 1.38114 * 120.05696 * 359.97280 * 22 21 20 24 24 C 1.53784 * 87.17275 * 334.60896 * 8 7 5 25 25 H 1.08999 * 109.47037 * 299.99524 * 1 2 3 26 26 H 1.08992 * 109.47541 * 59.99518 * 1 2 3 27 27 H 1.09000 * 109.47155 * 179.97438 * 1 2 3 28 28 H 1.09008 * 113.61372 * 25.43608 * 7 5 3 29 29 H 1.08998 * 113.69353 * 254.54625 * 7 5 3 30 30 H 0.97004 * 120.00005 * 23.46477 * 10 8 7 31 31 H 1.09000 * 109.47200 * 59.99611 * 13 11 10 32 32 H 1.09003 * 109.47275 * 299.99699 * 13 11 10 33 33 H 1.09000 * 109.46989 * 44.72825 * 17 16 15 34 34 H 0.96693 * 114.00306 * 299.99773 * 18 17 16 35 35 H 1.48506 * 110.00048 * 58.68772 * 19 17 16 36 36 H 1.48502 * 109.99996 * 180.02562 * 19 17 16 37 37 H 1.08004 * 119.97498 * 180.25409 * 20 16 15 38 38 H 1.07998 * 119.94265 * 179.97438 * 21 20 16 39 39 H 1.08003 * 119.96759 * 179.97438 * 22 21 20 40 40 H 1.07996 * 120.03003 * 180.02562 * 23 22 21 41 41 H 1.08994 * 113.61107 * 139.93966 * 24 8 7 42 42 H 1.09001 * 113.61296 * 270.84361 * 24 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4519 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4032 2.2092 0.0005 5 6 3.5663 1.2749 -0.0006 6 1 4.0242 0.6361 -0.7558 7 6 4.1077 2.7141 0.0001 8 6 5.1815 2.2261 0.9869 9 1 6.0816 1.8491 0.5015 10 7 5.4710 3.1816 2.0590 11 6 6.6577 3.1400 2.6966 12 8 7.4857 2.3111 2.3830 13 6 6.9553 4.1225 3.7998 14 8 8.2653 3.8774 4.3153 15 6 8.6922 4.6827 5.3234 16 6 9.9538 4.5011 5.8707 17 6 10.8525 3.4100 5.3484 18 8 10.3966 2.1450 5.8323 19 14 12.5957 3.7075 5.9346 20 6 10.3877 5.3248 6.8915 21 6 9.5636 6.3257 7.3713 22 6 8.3035 6.5055 6.8308 23 6 7.8655 5.6855 5.8094 24 6 4.1938 1.1210 1.3969 25 1 -0.3633 0.5138 0.8900 26 1 -0.3634 0.5139 -0.8899 27 1 -0.3633 -1.0277 -0.0005 28 1 3.4174 3.4401 0.4299 29 1 4.5105 3.0311 -0.9619 30 1 4.8086 3.8444 2.3100 31 1 6.2229 4.0047 4.5985 32 1 6.9034 5.1376 3.4061 33 1 10.8304 3.4116 4.2586 34 1 10.3899 2.0719 6.7964 35 1 12.6340 3.7393 7.4188 36 1 13.4921 2.6385 5.4257 37 1 11.3715 5.1865 7.3153 38 1 9.9045 6.9682 8.1697 39 1 7.6614 7.2879 7.2077 40 1 6.8815 5.8265 5.3873 41 1 4.6658 0.1522 1.5603 42 1 3.5271 1.4106 2.2091 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10970304_2989392.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:36:03 Heat of formation + Delta-G solvation = -124.798845 kcal Electronic energy + Delta-G solvation = -26446.185358 eV Core-core repulsion = 22359.846146 eV Total energy + Delta-G solvation = -4086.339212 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 322.134 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -42.04969 -41.55382 -40.73752 -39.31602 -38.40229 -37.60226 -37.44700 -34.73377 -32.75155 -31.29248 -29.91893 -29.02730 -26.86745 -26.72609 -26.62552 -23.76400 -22.66140 -22.46362 -21.70926 -20.70013 -19.54421 -19.00572 -18.29520 -18.08681 -17.95646 -17.51584 -17.42455 -16.95748 -16.78268 -16.38138 -16.18576 -15.90546 -15.58276 -15.41782 -15.02376 -14.97357 -14.49084 -14.30953 -14.18048 -13.76186 -13.69172 -13.57243 -13.40005 -13.04896 -13.02780 -12.60529 -12.50041 -12.36137 -12.11964 -11.87747 -11.87204 -11.84246 -11.67620 -11.46385 -11.00788 -10.52876 -10.22228 -9.96743 -9.20680 -4.94672 0.24555 0.43025 1.02693 1.29600 1.39389 1.42103 1.54880 1.75778 1.94038 2.61582 2.71082 3.20542 3.27749 3.46071 3.51704 3.61131 3.71949 3.73551 3.90327 3.96879 4.00534 4.06272 4.13958 4.23765 4.26653 4.32873 4.38552 4.46488 4.54378 4.54858 4.60227 4.66642 4.68646 4.79444 4.89763 4.99175 5.02319 5.29419 5.30433 5.38605 5.40814 5.54273 5.76882 6.26978 6.43730 6.53469 6.61937 7.07622 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.365 6.365 3 C 0.472 3.528 4 O -0.535 6.535 5 C -0.107 4.107 6 H 0.150 0.850 7 C -0.115 4.115 8 C 0.126 3.874 9 H 0.113 0.887 10 N -0.701 5.701 11 C 0.515 3.485 12 O -0.566 6.566 13 C 0.035 3.965 14 O -0.312 6.312 15 C 0.129 3.871 16 C -0.164 4.164 17 C -0.082 4.082 18 O -0.549 6.549 19 Si 0.782 3.218 20 C -0.088 4.088 21 C -0.154 4.154 22 C -0.075 4.075 23 C -0.212 4.212 24 C -0.131 4.131 25 H 0.062 0.938 26 H 0.062 0.938 27 H 0.127 0.873 28 H 0.103 0.897 29 H 0.100 0.900 30 H 0.420 0.580 31 H 0.119 0.881 32 H 0.125 0.875 33 H 0.097 0.903 34 H 0.381 0.619 35 H -0.265 1.265 36 H -0.308 1.308 37 H 0.146 0.854 38 H 0.150 0.850 39 H 0.153 0.847 40 H 0.154 0.846 41 H 0.088 0.912 42 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.460 5.554 1.581 6.732 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.281 6.281 3 C 0.317 3.683 4 O -0.425 6.425 5 C -0.126 4.126 6 H 0.167 0.833 7 C -0.153 4.153 8 C 0.021 3.979 9 H 0.131 0.869 10 N -0.355 5.355 11 C 0.302 3.698 12 O -0.444 6.444 13 C -0.043 4.043 14 O -0.225 6.225 15 C 0.084 3.916 16 C -0.165 4.165 17 C -0.190 4.190 18 O -0.356 6.356 19 Si 0.686 3.314 20 C -0.106 4.106 21 C -0.172 4.172 22 C -0.093 4.093 23 C -0.231 4.231 24 C -0.170 4.170 25 H 0.081 0.919 26 H 0.081 0.919 27 H 0.145 0.855 28 H 0.121 0.879 29 H 0.119 0.881 30 H 0.258 0.742 31 H 0.136 0.864 32 H 0.143 0.857 33 H 0.115 0.885 34 H 0.230 0.770 35 H -0.191 1.191 36 H -0.236 1.236 37 H 0.164 0.836 38 H 0.168 0.832 39 H 0.171 0.829 40 H 0.171 0.829 41 H 0.107 0.893 42 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges -2.410 4.671 1.080 5.366 hybrid contribution -1.569 -0.645 0.579 1.792 sum -3.979 4.025 1.659 5.898 Atomic orbital electron populations 1.23526 0.74989 1.05580 1.02522 1.86525 1.24820 1.33288 1.83464 1.23938 0.92416 0.81007 0.70979 1.90662 1.67821 1.37269 1.46707 1.22455 0.86034 1.01838 1.02273 0.83267 1.23313 0.96269 0.94563 1.01140 1.22414 0.97616 0.89781 0.88131 0.86924 1.45658 1.16635 1.36533 1.36634 1.20532 0.81975 0.84429 0.82886 1.90778 1.48036 1.39381 1.66181 1.22712 0.84937 1.00012 0.96594 1.86187 1.32612 1.54900 1.48769 1.19065 0.93657 0.90564 0.88332 1.19707 0.94584 1.01360 1.00822 1.25206 1.08075 0.82648 1.03062 1.86646 1.87819 1.33904 1.27265 0.94043 0.71980 0.86653 0.78739 1.21192 1.00552 0.94407 0.94437 1.21400 0.94645 0.99192 1.01995 1.21392 0.96101 0.97842 0.93959 1.21587 1.01504 0.98044 1.01933 1.23465 0.97683 1.01117 0.94702 0.91941 0.91915 0.85529 0.87906 0.88097 0.74155 0.86374 0.85713 0.88476 0.77028 1.19140 1.23622 0.83650 0.83248 0.82946 0.82859 0.89304 0.88907 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 10.56 113.37 1.20 1.15 16 2 O -0.36 -0.88 10.56 -51.43 -0.54 -1.42 16 3 C 0.47 1.24 7.49 71.24 0.53 1.77 16 4 O -0.53 -4.24 15.65 21.98 0.34 -3.90 16 5 C -0.11 0.35 4.26 -10.95 -0.05 0.30 16 6 H 0.15 -1.01 8.14 -2.39 -0.02 -1.03 16 7 C -0.11 0.56 7.15 31.12 0.22 0.78 16 8 C 0.13 -0.34 4.21 45.52 0.19 -0.15 16 9 H 0.11 0.06 7.50 -2.39 -0.02 0.04 16 10 N -0.70 2.61 5.36 -440.04 -2.36 0.25 16 11 C 0.52 1.79 7.91 87.66 0.69 2.48 16 12 O -0.57 -8.50 16.12 16.00 0.26 -8.24 16 13 C 0.04 -0.06 5.22 71.23 0.37 0.32 16 14 O -0.31 -2.41 9.00 -73.44 -0.66 -3.07 16 15 C 0.13 0.58 6.66 22.51 0.15 0.73 16 16 C -0.16 -0.70 5.27 -19.77 -0.10 -0.80 16 17 C -0.08 -0.54 2.38 71.24 0.17 -0.37 16 18 O -0.55 -5.72 12.88 -148.98 -1.92 -7.64 16 19 Si 0.78 1.09 30.25 68.60 2.08 3.17 16 20 C -0.09 0.02 8.66 22.25 0.19 0.21 16 21 C -0.15 0.42 10.04 22.28 0.22 0.64 16 22 C -0.08 0.26 10.04 22.25 0.22 0.48 16 23 C -0.21 0.34 9.04 22.36 0.20 0.54 16 24 C -0.13 0.39 7.44 31.18 0.23 0.62 16 25 H 0.06 -0.08 8.13 -2.39 -0.02 -0.10 16 26 H 0.06 -0.07 8.13 -2.39 -0.02 -0.09 16 27 H 0.13 -0.85 8.14 -2.39 -0.02 -0.87 16 28 H 0.10 -0.43 7.41 -2.38 -0.02 -0.45 16 29 H 0.10 -0.66 8.14 -2.39 -0.02 -0.68 16 30 H 0.42 -4.35 8.71 -92.71 -0.81 -5.16 16 31 H 0.12 -0.84 7.65 -2.39 -0.02 -0.86 16 32 H 0.13 -1.03 7.67 -2.39 -0.02 -1.04 16 33 H 0.10 0.94 7.82 -2.39 -0.02 0.92 16 34 H 0.38 1.15 8.70 -74.06 -0.64 0.50 16 35 H -0.27 -0.55 6.68 99.48 0.66 0.11 16 36 H -0.31 -2.97 7.11 99.48 0.71 -2.26 16 37 H 0.15 -0.49 4.86 -2.91 -0.01 -0.50 16 38 H 0.15 -1.09 8.06 -2.91 -0.02 -1.11 16 39 H 0.15 -1.32 8.06 -2.91 -0.02 -1.34 16 40 H 0.15 -1.17 6.30 -2.91 -0.02 -1.19 16 41 H 0.09 -0.19 8.14 -2.39 -0.02 -0.21 16 42 H 0.09 -0.28 8.10 -2.39 -0.02 -0.30 16 Total: 0.00 -29.01 359.61 1.26 -27.75 By element: Atomic # 1 Polarization: -15.23 SS G_CDS: -0.39 Total: -15.62 kcal Atomic # 6 Polarization: 4.26 SS G_CDS: 4.45 Total: 8.71 kcal Atomic # 7 Polarization: 2.61 SS G_CDS: -2.36 Total: 0.25 kcal Atomic # 8 Polarization: -21.74 SS G_CDS: -2.52 Total: -24.26 kcal Atomic # 14 Polarization: 1.09 SS G_CDS: 2.08 Total: 3.17 kcal Total: -29.01 1.26 -27.75 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10970304_2989392.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -97.049 kcal (2) G-P(sol) polarization free energy of solvation -29.011 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -126.060 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.261 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.750 kcal (6) G-S(sol) free energy of system = (1) + (5) -124.799 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.83 seconds