Wall clock time and date at job start Sat Mar 6 2021 15:36:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45199 * 1 3 3 C 1.34224 * 117.00347 * 2 1 4 4 O 1.20832 * 119.99791 * 359.97438 * 3 2 1 5 5 C 1.50698 * 120.00535 * 179.97438 * 3 2 1 6 6 H 1.08999 * 112.90521 * 311.25171 * 5 3 2 7 7 C 1.53781 * 113.61565 * 82.49826 * 5 3 2 8 8 C 1.54049 * 87.08031 * 139.97986 * 7 5 3 9 9 H 1.09000 * 113.61076 * 89.06984 * 8 7 5 10 10 N 1.46494 * 113.69866 * 220.05561 * 8 7 5 11 11 C 1.34779 * 119.99525 * 252.42298 * 10 8 7 12 12 O 1.21281 * 120.00328 * 359.97438 * 11 10 8 13 13 C 1.50706 * 119.99749 * 179.97438 * 11 10 8 14 14 C 1.53000 * 109.47137 * 179.97438 * 13 11 10 15 15 O 1.42904 * 109.46992 * 180.02562 * 14 13 11 16 16 C 1.35901 * 116.99747 * 180.02562 * 15 14 13 17 17 C 1.38728 * 120.05588 * 359.72416 * 16 15 14 18 18 C 1.38142 * 119.94185 * 179.70172 * 17 16 15 19 19 C 1.38268 * 120.05862 * 0.59647 * 18 17 16 20 20 C 1.50700 * 119.94884 * 179.70304 * 19 18 17 21 21 O 1.42900 * 109.47044 * 119.97506 * 20 19 18 22 22 Si 1.86295 * 109.46832 * 359.97438 * 20 19 18 23 23 C 1.38267 * 120.10619 * 359.68034 * 19 18 17 24 24 C 1.38145 * 120.05730 * 0.02562 * 23 19 18 25 25 C 1.53781 * 113.61793 * 179.97438 * 5 3 2 26 26 H 1.09005 * 109.46506 * 60.00463 * 1 2 3 27 27 H 1.08992 * 109.46938 * 180.02562 * 1 2 3 28 28 H 1.09000 * 109.46915 * 300.00779 * 1 2 3 29 29 H 1.09005 * 113.61471 * 254.53569 * 7 5 3 30 30 H 1.09003 * 113.61469 * 25.43348 * 7 5 3 31 31 H 0.97000 * 120.00537 * 72.42383 * 10 8 7 32 32 H 1.09001 * 109.46833 * 300.00001 * 13 11 10 33 33 H 1.09005 * 109.47003 * 59.99764 * 13 11 10 34 34 H 1.08999 * 109.47089 * 300.00216 * 14 13 11 35 35 H 1.09000 * 109.46920 * 60.00556 * 14 13 11 36 36 H 1.08003 * 120.02865 * 0.02562 * 17 16 15 37 37 H 1.08003 * 119.97310 * 180.27820 * 18 17 16 38 38 H 1.08999 * 109.47233 * 239.97800 * 20 19 18 39 39 H 0.96693 * 114.00188 * 299.99841 * 21 20 19 40 40 H 1.48501 * 109.99817 * 180.02562 * 22 20 19 41 41 H 1.48502 * 110.00276 * 301.31589 * 22 20 19 42 42 H 1.08001 * 119.97348 * 180.02562 * 23 19 18 43 43 H 1.07997 * 120.02724 * 180.02562 * 24 23 19 44 44 H 1.09002 * 113.61445 * 334.56799 * 25 5 3 45 45 H 1.09002 * 113.61408 * 105.38530 * 25 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4033 2.2093 -0.0005 5 6 3.5663 1.2748 0.0006 6 1 4.0244 0.6361 0.7558 7 6 4.1917 1.1231 -1.3961 8 6 5.1831 2.2285 -0.9859 9 1 6.0824 1.8500 -0.4998 10 7 5.4733 3.1860 -2.0560 11 6 6.6723 3.1661 -2.6711 12 8 7.5112 2.3559 -2.3384 13 6 6.9706 4.1507 -3.7724 14 6 8.3888 3.9157 -4.2963 15 8 8.6719 4.8497 -5.3401 16 6 9.8995 4.7755 -5.9182 17 6 10.8150 3.8271 -5.4858 18 6 12.0600 3.7497 -6.0792 19 6 12.3986 4.6244 -7.0950 20 6 13.7600 4.5421 -7.7362 21 8 13.6136 4.2752 -9.1324 22 14 14.7389 3.1710 -6.9410 23 6 11.4900 5.5743 -7.5239 24 6 10.2415 5.6519 -6.9378 25 6 4.1078 2.7142 -0.0001 26 1 -0.3632 0.5138 -0.8901 27 1 -0.3633 -1.0276 0.0005 28 1 -0.3633 0.5140 0.8899 29 1 4.6621 0.1537 -1.5609 30 1 3.5244 1.4142 -2.2073 31 1 4.8025 3.8343 -2.3218 32 1 6.2559 4.0153 -4.5841 33 1 6.8909 5.1659 -3.3835 34 1 9.1032 4.0512 -3.4843 35 1 8.4689 2.9005 -4.6851 36 1 10.5526 3.1464 -4.6893 37 1 12.7715 3.0085 -5.7460 38 1 14.2835 5.4884 -7.6000 39 1 13.1553 3.4467 -9.3285 40 1 16.0838 3.0798 -7.5641 41 1 14.8710 3.4206 -5.4831 42 1 11.7566 6.2563 -8.3178 43 1 9.5320 6.3937 -7.2735 44 1 3.4175 3.4401 -0.4298 45 1 4.5091 3.0302 0.9628 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10970304_4549602.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:36:08 Heat of formation + Delta-G solvation = -136.348633 kcal Electronic energy + Delta-G solvation = -27354.637156 eV Core-core repulsion = 23112.259488 eV Total energy + Delta-G solvation = -4242.377668 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 336.150 amu Computer time = 1.10 seconds Orbital eigenvalues (eV) -42.00564 -41.36547 -40.83403 -39.38228 -38.97220 -37.44931 -37.16083 -34.64959 -33.26233 -32.02576 -31.40805 -29.39576 -27.28300 -26.82146 -26.36953 -25.38226 -23.61724 -22.49368 -22.10891 -21.54832 -20.61413 -19.49237 -18.98947 -18.33678 -18.00854 -17.71050 -17.49399 -17.42489 -17.03412 -16.51397 -16.38336 -16.25719 -15.94568 -15.87845 -15.58161 -14.86795 -14.71607 -14.53695 -14.44938 -14.29782 -14.20824 -14.07021 -13.60464 -13.54216 -13.48154 -13.02986 -12.85733 -12.83720 -12.48953 -12.34215 -12.19256 -12.03788 -11.86406 -11.81189 -11.76843 -11.68470 -11.43893 -11.02443 -10.41724 -10.13387 -10.04238 -9.20457 -5.00741 0.28423 0.30849 1.04714 1.32762 1.50372 1.59066 1.62169 1.83063 1.95203 2.53090 2.66485 3.23797 3.32661 3.54527 3.57645 3.64463 3.72073 3.75180 3.83767 3.89288 3.92668 3.99714 4.06694 4.25199 4.26651 4.27669 4.35043 4.44264 4.50758 4.52625 4.57756 4.63403 4.66699 4.68071 4.70234 4.79150 4.83092 4.92195 4.97710 5.09194 5.18344 5.28947 5.32318 5.47264 5.49739 5.72449 6.32795 6.44658 6.63606 6.78901 7.13404 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.364 6.364 3 C 0.471 3.529 4 O -0.537 6.537 5 C -0.107 4.107 6 H 0.151 0.849 7 C -0.129 4.129 8 C 0.125 3.875 9 H 0.118 0.882 10 N -0.707 5.707 11 C 0.523 3.477 12 O -0.578 6.578 13 C -0.135 4.135 14 C 0.072 3.928 15 O -0.322 6.322 16 C 0.123 3.877 17 C -0.208 4.208 18 C -0.080 4.080 19 C -0.162 4.162 20 C -0.066 4.066 21 O -0.556 6.556 22 Si 0.771 3.229 23 C -0.060 4.060 24 C -0.159 4.159 25 C -0.120 4.120 26 H 0.061 0.939 27 H 0.127 0.873 28 H 0.061 0.939 29 H 0.093 0.907 30 H 0.090 0.910 31 H 0.418 0.582 32 H 0.126 0.874 33 H 0.125 0.875 34 H 0.065 0.935 35 H 0.069 0.931 36 H 0.142 0.858 37 H 0.144 0.856 38 H 0.106 0.894 39 H 0.395 0.605 40 H -0.298 1.298 41 H -0.288 1.288 42 H 0.139 0.861 43 H 0.141 0.859 44 H 0.098 0.902 45 H 0.097 0.903 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.092 -2.643 0.704 4.922 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.280 6.280 3 C 0.315 3.685 4 O -0.427 6.427 5 C -0.126 4.126 6 H 0.168 0.832 7 C -0.168 4.168 8 C 0.020 3.980 9 H 0.136 0.864 10 N -0.359 5.359 11 C 0.311 3.689 12 O -0.458 6.458 13 C -0.174 4.174 14 C -0.003 4.003 15 O -0.236 6.236 16 C 0.078 3.922 17 C -0.227 4.227 18 C -0.098 4.098 19 C -0.163 4.163 20 C -0.177 4.177 21 O -0.364 6.364 22 Si 0.677 3.323 23 C -0.078 4.078 24 C -0.178 4.178 25 C -0.158 4.158 26 H 0.080 0.920 27 H 0.145 0.855 28 H 0.080 0.920 29 H 0.111 0.889 30 H 0.109 0.891 31 H 0.255 0.745 32 H 0.144 0.856 33 H 0.143 0.857 34 H 0.084 0.916 35 H 0.088 0.912 36 H 0.159 0.841 37 H 0.161 0.839 38 H 0.124 0.876 39 H 0.245 0.755 40 H -0.227 1.227 41 H -0.216 1.216 42 H 0.156 0.844 43 H 0.159 0.841 44 H 0.116 0.884 45 H 0.116 0.884 Dipole moment (debyes) X Y Z Total from point charges -2.894 -2.453 1.307 4.012 hybrid contribution -0.758 0.845 0.154 1.145 sum -3.652 -1.608 1.461 4.249 Atomic orbital electron populations 1.23526 0.75037 1.05595 1.02466 1.86522 1.24773 1.33267 1.83467 1.24011 0.92543 0.80985 0.70942 1.90669 1.67897 1.37343 1.46761 1.22443 0.85873 1.01762 1.02565 0.83185 1.23469 0.97651 1.01263 0.94393 1.22436 0.97555 0.89741 0.88252 0.86441 1.45841 1.16046 1.36947 1.37050 1.20616 0.81634 0.83989 0.82655 1.90738 1.47665 1.41075 1.66291 1.21455 0.96949 1.00963 0.98069 1.22475 0.96965 0.92167 0.88722 1.85961 1.30471 1.56672 1.50502 1.19176 0.84479 0.95158 0.93421 1.21425 0.95139 1.01799 1.04342 1.21000 0.96018 0.97813 0.94919 1.20328 0.97663 0.98751 0.99509 1.25048 0.97540 1.08744 0.86330 1.86453 1.81577 1.47139 1.21232 0.93763 0.77816 0.84971 0.75705 1.20961 0.91792 0.96952 0.98100 1.20665 0.98283 1.01184 0.97632 1.23325 0.96621 0.94593 1.01270 0.91984 0.85450 0.92016 0.88872 0.89132 0.74464 0.85568 0.85683 0.91628 0.91243 0.84059 0.83869 0.87610 0.75530 1.22657 1.21557 0.84355 0.84139 0.88365 0.88427 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.06 10.56 113.37 1.20 1.14 16 2 O -0.36 -0.59 10.56 -51.36 -0.54 -1.14 16 3 C 0.47 0.94 7.48 71.24 0.53 1.48 16 4 O -0.54 -4.19 15.65 21.95 0.34 -3.84 16 5 C -0.11 0.47 4.26 -11.01 -0.05 0.43 16 6 H 0.15 -1.22 8.14 -2.39 -0.02 -1.24 16 7 C -0.13 0.65 7.44 31.21 0.23 0.88 16 8 C 0.13 -0.61 4.25 45.60 0.19 -0.41 16 9 H 0.12 -0.31 7.47 -2.39 -0.02 -0.33 16 10 N -0.71 4.05 5.36 -439.66 -2.36 1.69 16 11 C 0.52 -0.72 7.83 87.66 0.69 -0.03 16 12 O -0.58 -3.97 15.58 -3.03 -0.05 -4.02 16 13 C -0.13 0.74 6.07 29.85 0.18 0.92 16 14 C 0.07 -0.03 4.03 71.98 0.29 0.26 16 15 O -0.32 -0.86 10.14 -92.43 -0.94 -1.79 16 16 C 0.12 0.46 6.69 22.50 0.15 0.61 16 17 C -0.21 -0.47 9.04 22.36 0.20 -0.26 16 18 C -0.08 -0.07 8.66 22.25 0.19 0.12 16 19 C -0.16 -0.25 5.39 -19.85 -0.11 -0.36 16 20 C -0.07 -0.04 2.82 71.24 0.20 0.16 16 21 O -0.56 -0.54 12.77 -148.98 -1.90 -2.44 16 22 Si 0.77 -0.72 29.78 68.60 2.04 1.33 16 23 C -0.06 -0.14 9.60 22.25 0.21 0.08 16 24 C -0.16 -0.46 9.99 22.36 0.22 -0.24 16 25 C -0.12 0.66 7.14 31.11 0.22 0.88 16 26 H 0.06 -0.11 8.13 -2.38 -0.02 -0.13 16 27 H 0.13 -0.94 8.14 -2.39 -0.02 -0.96 16 28 H 0.06 -0.09 8.13 -2.39 -0.02 -0.11 16 29 H 0.09 -0.49 8.14 -2.38 -0.02 -0.51 16 30 H 0.09 -0.41 8.09 -2.39 -0.02 -0.43 16 31 H 0.42 -4.41 8.73 -92.71 -0.81 -5.22 16 32 H 0.13 -1.12 8.14 -2.39 -0.02 -1.14 16 33 H 0.13 -1.09 8.14 -2.38 -0.02 -1.10 16 34 H 0.07 0.06 7.61 -2.39 -0.02 0.04 16 35 H 0.07 0.02 7.63 -2.39 -0.02 0.00 16 36 H 0.14 0.02 6.30 -2.91 -0.02 0.00 16 37 H 0.14 -0.43 4.87 -2.91 -0.01 -0.45 16 38 H 0.11 0.17 7.96 -2.39 -0.02 0.15 16 39 H 0.39 -2.73 8.70 -74.06 -0.64 -3.37 16 40 H -0.30 -1.90 7.11 99.48 0.71 -1.19 16 41 H -0.29 -1.15 7.11 99.48 0.71 -0.44 16 42 H 0.14 0.08 8.06 -2.91 -0.02 0.05 16 43 H 0.14 0.08 8.06 -2.91 -0.02 0.05 16 44 H 0.10 -0.39 7.41 -2.39 -0.02 -0.41 16 45 H 0.10 -0.67 8.14 -2.39 -0.02 -0.69 16 Total: 0.00 -22.76 381.32 0.78 -21.98 By element: Atomic # 1 Polarization: -17.04 SS G_CDS: -0.38 Total: -17.42 kcal Atomic # 6 Polarization: 1.10 SS G_CDS: 4.56 Total: 5.66 kcal Atomic # 7 Polarization: 4.05 SS G_CDS: -2.36 Total: 1.69 kcal Atomic # 8 Polarization: -10.14 SS G_CDS: -3.09 Total: -13.23 kcal Atomic # 14 Polarization: -0.72 SS G_CDS: 2.04 Total: 1.33 kcal Total: -22.76 0.78 -21.98 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10970304_4549602.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -114.372 kcal (2) G-P(sol) polarization free energy of solvation -22.759 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -137.131 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.782 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.977 kcal (6) G-S(sol) free energy of system = (1) + (5) -136.349 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.10 seconds