Wall clock time and date at job start Sat Mar 6 2021 15:36:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45198 * 1 3 3 C 1.34226 * 116.99972 * 2 1 4 4 O 1.20829 * 120.00243 * 0.02562 * 3 2 1 5 5 C 1.50701 * 120.00120 * 180.02562 * 3 2 1 6 6 H 1.09002 * 112.85047 * 50.33376 * 5 3 2 7 7 C 1.53781 * 113.61772 * 181.53091 * 5 3 2 8 8 C 1.53777 * 87.08336 * 140.06093 * 7 5 3 9 9 H 1.09003 * 113.60961 * 89.20081 * 8 7 5 10 10 N 1.46500 * 113.61534 * 220.01705 * 8 7 5 11 11 C 1.34779 * 119.99895 * 204.99945 * 10 8 7 12 12 O 1.21276 * 120.00229 * 0.02562 * 11 10 8 13 13 C 1.50701 * 119.99810 * 180.02562 * 11 10 8 14 14 C 1.53001 * 109.46866 * 179.97438 * 13 11 10 15 15 O 1.42899 * 109.46701 * 179.97438 * 14 13 11 16 16 C 1.35906 * 116.99998 * 180.02562 * 15 14 13 17 17 C 1.38708 * 120.05786 * 179.72925 * 16 15 14 18 18 C 1.38164 * 119.94328 * 179.72774 * 17 16 15 19 19 C 1.50702 * 119.97253 * 180.27576 * 18 17 16 20 20 O 1.42896 * 109.47188 * 300.29752 * 19 18 17 21 21 Si 1.86300 * 109.46954 * 180.29526 * 19 18 17 22 22 C 1.38248 * 120.05639 * 0.56931 * 18 17 16 23 23 C 1.38289 * 120.10912 * 359.68298 * 22 18 17 24 24 C 1.38125 * 120.05372 * 0.04596 * 23 22 18 25 25 C 1.53775 * 87.07992 * 334.56762 * 8 7 5 26 26 H 1.08997 * 109.47241 * 299.99853 * 1 2 3 27 27 H 1.09000 * 109.47033 * 60.00173 * 1 2 3 28 28 H 1.09000 * 109.47065 * 179.97438 * 1 2 3 29 29 H 1.08997 * 113.61673 * 254.61641 * 7 5 3 30 30 H 1.09005 * 113.61396 * 25.51470 * 7 5 3 31 31 H 0.97002 * 120.00084 * 25.00713 * 10 8 7 32 32 H 1.08995 * 109.47452 * 300.00609 * 13 11 10 33 33 H 1.09002 * 109.47008 * 59.99988 * 13 11 10 34 34 H 1.08991 * 109.47523 * 300.00019 * 14 13 11 35 35 H 1.09003 * 109.46822 * 60.01003 * 14 13 11 36 36 H 1.08004 * 120.03003 * 359.97438 * 17 16 15 37 37 H 1.09000 * 109.47163 * 60.29458 * 19 18 17 38 38 H 0.96705 * 113.99471 * 299.99877 * 20 19 18 39 39 H 1.48507 * 109.99989 * 179.97438 * 21 19 18 40 40 H 1.48505 * 110.00247 * 301.31613 * 21 19 18 41 41 H 1.07997 * 119.94498 * 179.70350 * 22 18 17 42 42 H 1.08002 * 119.97180 * 180.02562 * 23 22 18 43 43 H 1.08001 * 120.02277 * 180.02562 * 24 23 22 44 44 H 1.08993 * 113.61636 * 270.87622 * 25 8 7 45 45 H 1.09008 * 113.61006 * 139.97865 * 25 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1960 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2749 -0.0006 6 1 4.0223 0.6569 -0.7741 7 6 4.1078 2.7137 0.0371 8 6 5.1841 2.1995 1.0077 9 1 6.0830 1.8357 0.5098 10 7 5.4766 3.1261 2.1041 11 6 6.6765 3.0879 2.7167 12 8 7.5143 2.2869 2.3600 13 6 6.9771 4.0407 3.8449 14 6 8.3954 3.7890 4.3607 15 8 8.6807 4.6929 5.4301 16 6 9.9091 4.6015 6.0042 17 6 10.2552 5.4519 7.0439 18 6 11.5027 5.3532 7.6295 19 6 11.8771 6.2727 8.7633 20 8 11.8038 7.6293 8.3204 21 14 13.6137 5.8946 9.3218 22 6 12.4100 4.4156 7.1722 23 6 12.0693 3.5701 6.1323 24 6 10.8214 3.6611 5.5473 25 6 4.1954 1.0854 1.3898 26 1 -0.3633 0.5138 0.8900 27 1 -0.3633 0.5138 -0.8900 28 1 -0.3633 -1.0277 -0.0005 29 1 4.5078 3.0549 -0.9177 30 1 3.4187 3.4279 0.4880 31 1 4.8066 3.7670 2.3892 32 1 6.8976 5.0665 3.4852 33 1 6.2635 3.8830 4.6536 34 1 8.4745 2.7633 4.7206 35 1 9.1093 3.9466 3.5522 36 1 9.5486 6.1880 7.3980 37 1 11.1876 6.1241 9.5944 38 1 12.3924 7.8338 7.5808 39 1 13.9952 6.7951 10.4394 40 1 13.7107 4.4774 9.7551 41 1 13.3863 4.3432 7.6281 42 1 12.7797 2.8383 5.7772 43 1 10.5557 3.0003 4.7354 44 1 3.5304 1.3544 2.2104 45 1 4.6664 0.1120 1.5269 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10970304_4549614.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:36:13 Heat of formation + Delta-G solvation = -136.047430 kcal Electronic energy + Delta-G solvation = -27390.286652 eV Core-core repulsion = 23147.922046 eV Total energy + Delta-G solvation = -4242.364607 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 336.150 amu Computer time = 0.95 seconds Orbital eigenvalues (eV) -42.03437 -41.34052 -40.84596 -39.41929 -38.94487 -37.37535 -37.22966 -34.71174 -33.25770 -32.41412 -30.83108 -29.44198 -27.35086 -27.00582 -26.82123 -25.22306 -23.62981 -22.65485 -21.96776 -21.59545 -20.71399 -19.31610 -19.00522 -18.16531 -18.01930 -17.63995 -17.51537 -17.43672 -17.10441 -16.84929 -16.50877 -16.35960 -16.13440 -15.90086 -15.37566 -14.95398 -14.80332 -14.58792 -14.40998 -14.25209 -14.14542 -14.06949 -13.76653 -13.56074 -13.24670 -13.09939 -12.93261 -12.82685 -12.64907 -12.43774 -12.35299 -11.95060 -11.90508 -11.83579 -11.81623 -11.58995 -11.42580 -11.03268 -10.48187 -10.24815 -9.86847 -9.20848 -5.01333 0.25397 0.44703 1.09156 1.29203 1.43564 1.51745 1.65430 1.77654 1.98753 2.45365 2.72049 3.08867 3.16239 3.45088 3.47191 3.50151 3.60464 3.66114 3.79830 3.81321 3.89527 3.93728 4.07914 4.11796 4.19215 4.23125 4.27088 4.33486 4.36947 4.39812 4.46304 4.52426 4.55042 4.56531 4.60903 4.64536 4.71380 4.72282 4.93171 5.01338 5.29162 5.30413 5.34681 5.41708 5.48042 5.71981 6.26250 6.40211 6.58279 6.67159 7.01148 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.357 6.357 3 C 0.472 3.528 4 O -0.505 6.505 5 C -0.109 4.109 6 H 0.132 0.868 7 C -0.127 4.127 8 C 0.125 3.875 9 H 0.125 0.875 10 N -0.718 5.718 11 C 0.523 3.477 12 O -0.537 6.537 13 C -0.143 4.143 14 C 0.075 3.925 15 O -0.316 6.316 16 C 0.132 3.868 17 C -0.126 4.126 18 C -0.082 4.082 19 C -0.069 4.069 20 O -0.539 6.539 21 Si 0.693 3.307 22 C -0.156 4.156 23 C -0.073 4.073 24 C -0.203 4.203 25 C -0.134 4.134 26 H 0.064 0.936 27 H 0.064 0.936 28 H 0.104 0.896 29 H 0.089 0.911 30 H 0.103 0.897 31 H 0.406 0.594 32 H 0.109 0.891 33 H 0.108 0.892 34 H 0.072 0.928 35 H 0.073 0.927 36 H 0.134 0.866 37 H 0.115 0.885 38 H 0.380 0.620 39 H -0.255 1.255 40 H -0.258 1.258 41 H 0.128 0.872 42 H 0.131 0.869 43 H 0.133 0.867 44 H 0.092 0.908 45 H 0.090 0.910 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.129 -1.142 -2.517 2.767 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.273 6.273 3 C 0.314 3.686 4 O -0.392 6.392 5 C -0.129 4.129 6 H 0.150 0.850 7 C -0.165 4.165 8 C 0.019 3.981 9 H 0.143 0.857 10 N -0.369 5.369 11 C 0.310 3.690 12 O -0.413 6.413 13 C -0.183 4.183 14 C -0.001 4.001 15 O -0.230 6.230 16 C 0.087 3.913 17 C -0.144 4.144 18 C -0.083 4.083 19 C -0.180 4.180 20 O -0.344 6.344 21 Si 0.595 3.405 22 C -0.173 4.173 23 C -0.091 4.091 24 C -0.221 4.221 25 C -0.173 4.173 26 H 0.082 0.918 27 H 0.083 0.917 28 H 0.122 0.878 29 H 0.108 0.892 30 H 0.122 0.878 31 H 0.241 0.759 32 H 0.127 0.873 33 H 0.126 0.874 34 H 0.091 0.909 35 H 0.091 0.909 36 H 0.152 0.848 37 H 0.132 0.868 38 H 0.227 0.773 39 H -0.180 1.180 40 H -0.183 1.183 41 H 0.145 0.855 42 H 0.148 0.852 43 H 0.150 0.850 44 H 0.110 0.890 45 H 0.109 0.891 Dipole moment (debyes) X Y Z Total from point charges 0.158 -1.521 -1.582 2.200 hybrid contribution -1.349 -0.074 -0.076 1.353 sum -1.191 -1.595 -1.658 2.590 Atomic orbital electron populations 1.23333 0.75855 1.04078 1.02724 1.86519 1.23782 1.33241 1.83739 1.23464 0.91560 0.81452 0.72080 1.90688 1.66986 1.36429 1.45101 1.22308 0.87745 1.00960 1.01856 0.84976 1.23382 0.97074 0.94938 1.01065 1.22466 0.97857 0.89962 0.87767 0.85673 1.45910 1.16282 1.38729 1.36028 1.20339 0.81744 0.83939 0.82992 1.90751 1.46440 1.39042 1.65064 1.21482 0.97887 1.01059 0.97837 1.22414 0.95819 0.93181 0.88692 1.85979 1.30544 1.57769 1.48722 1.18958 0.84213 0.94887 0.93215 1.20235 0.97138 1.00426 0.96626 1.20133 0.93749 0.96964 0.97443 1.25106 1.12260 0.83421 0.97220 1.86508 1.67995 1.24704 1.55224 0.94593 0.79938 0.80245 0.85737 1.20932 0.99277 0.97909 0.99222 1.20932 0.95668 0.97809 0.94690 1.21393 0.95325 1.01549 1.03859 1.23453 0.97932 1.01162 0.94751 0.91755 0.91687 0.87791 0.89195 0.87845 0.75906 0.87302 0.87404 0.90930 0.90851 0.84820 0.86755 0.77304 1.17989 1.18286 0.85452 0.85150 0.84967 0.88987 0.89117 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 101.05 1.07 1.03 16 2 O -0.36 -0.33 10.56 -39.25 -0.41 -0.74 16 3 C 0.47 0.48 7.49 36.01 0.27 0.75 16 4 O -0.50 -1.88 15.66 -18.75 -0.29 -2.17 16 5 C -0.11 0.21 4.26 -90.96 -0.39 -0.18 16 6 H 0.13 -0.47 8.14 -51.93 -0.42 -0.89 16 7 C -0.13 0.31 7.15 -25.92 -0.19 0.13 16 8 C 0.12 -0.27 4.24 -67.12 -0.28 -0.55 16 9 H 0.13 -0.15 7.46 -51.93 -0.39 -0.54 16 10 N -0.72 1.74 5.35 -53.02 -0.28 1.46 16 11 C 0.52 -0.19 7.83 -10.98 -0.09 -0.27 16 12 O -0.54 -1.82 15.58 5.56 0.09 -1.73 16 13 C -0.14 0.30 6.07 -27.88 -0.17 0.13 16 14 C 0.07 0.00 4.03 37.16 0.15 0.15 16 15 O -0.32 -0.57 10.14 -19.44 -0.20 -0.77 16 16 C 0.13 0.29 6.69 -39.22 -0.26 0.03 16 17 C -0.13 -0.26 9.55 -39.44 -0.38 -0.64 16 18 C -0.08 -0.08 5.39 -104.64 -0.56 -0.64 16 19 C -0.07 -0.02 2.82 36.01 0.10 0.08 16 20 O -0.54 -0.36 12.76 -35.23 -0.45 -0.81 16 21 Si 0.69 -0.54 29.79 -169.99 -5.06 -5.60 16 22 C -0.16 -0.03 8.67 -39.56 -0.34 -0.37 16 23 C -0.07 -0.02 10.04 -39.60 -0.40 -0.42 16 24 C -0.20 -0.24 9.04 -39.43 -0.36 -0.60 16 25 C -0.13 0.30 7.43 -25.92 -0.19 0.11 16 26 H 0.06 -0.06 8.13 -51.93 -0.42 -0.48 16 27 H 0.06 -0.06 8.13 -51.93 -0.42 -0.48 16 28 H 0.10 -0.34 8.14 -51.93 -0.42 -0.76 16 29 H 0.09 -0.28 8.14 -51.93 -0.42 -0.70 16 30 H 0.10 -0.19 7.43 -51.93 -0.39 -0.57 16 31 H 0.41 -1.88 8.73 -40.82 -0.36 -2.24 16 32 H 0.11 -0.37 8.14 -51.93 -0.42 -0.80 16 33 H 0.11 -0.36 8.14 -51.93 -0.42 -0.78 16 34 H 0.07 0.03 7.62 -51.93 -0.40 -0.37 16 35 H 0.07 0.02 7.62 -51.93 -0.40 -0.38 16 36 H 0.13 0.28 8.06 -52.48 -0.42 -0.15 16 37 H 0.12 0.08 7.96 -51.93 -0.41 -0.34 16 38 H 0.38 -1.21 8.70 45.56 0.40 -0.81 16 39 H -0.25 -0.61 7.11 56.52 0.40 -0.21 16 40 H -0.26 -0.39 7.11 56.52 0.40 0.01 16 41 H 0.13 -0.21 4.87 -52.49 -0.26 -0.47 16 42 H 0.13 -0.23 8.06 -52.49 -0.42 -0.66 16 43 H 0.13 0.02 6.30 -52.49 -0.33 -0.31 16 44 H 0.09 -0.18 8.10 -51.93 -0.42 -0.60 16 45 H 0.09 -0.20 8.14 -51.92 -0.42 -0.63 16 LS Contribution 381.32 15.07 5.75 5.75 Total: 0.00 -9.78 381.32 -9.26 -19.04 By element: Atomic # 1 Polarization: -6.78 SS G_CDS: -6.37 Total: -13.15 kcal Atomic # 6 Polarization: 0.75 SS G_CDS: -2.02 Total: -1.26 kcal Atomic # 7 Polarization: 1.74 SS G_CDS: -0.28 Total: 1.46 kcal Atomic # 8 Polarization: -4.96 SS G_CDS: -1.27 Total: -6.23 kcal Atomic # 14 Polarization: -0.54 SS G_CDS: -5.06 Total: -5.60 kcal Total LS contribution 5.75 Total: 5.75 kcal Total: -9.78 -9.26 -19.04 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10970304_4549614.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -117.007 kcal (2) G-P(sol) polarization free energy of solvation -9.785 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -126.792 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.255 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.040 kcal (6) G-S(sol) free energy of system = (1) + (5) -136.047 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.95 seconds