Wall clock time and date at job start Sat Mar 6 2021 15:36:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45202 * 1 3 3 C 1.34225 * 116.99810 * 2 1 4 4 O 1.20832 * 120.00534 * 0.02562 * 3 2 1 5 5 C 1.50699 * 120.00137 * 179.97438 * 3 2 1 6 6 H 1.09005 * 112.85029 * 311.20253 * 5 3 2 7 7 C 1.53789 * 113.61410 * 82.50222 * 5 3 2 8 8 C 1.53779 * 87.07940 * 139.98234 * 7 5 3 9 9 H 1.09002 * 113.68981 * 89.12779 * 8 7 5 10 10 N 1.46496 * 113.61716 * 220.01745 * 8 7 5 11 11 C 1.34777 * 120.00258 * 252.50494 * 10 8 7 12 12 O 1.21279 * 120.00166 * 359.97438 * 11 10 8 13 13 C 1.50706 * 119.99762 * 179.97438 * 11 10 8 14 14 C 1.53002 * 109.46925 * 179.97438 * 13 11 10 15 15 C 1.52996 * 109.47340 * 180.02562 * 14 13 11 16 16 O 1.42897 * 109.47253 * 180.02562 * 15 14 13 17 17 C 1.35904 * 117.00077 * 179.97438 * 16 15 14 18 18 C 1.38709 * 120.05812 * 179.72463 * 17 16 15 19 19 C 1.38166 * 119.94369 * 179.76982 * 18 17 16 20 20 C 1.50698 * 119.97088 * 180.23258 * 19 18 17 21 21 O 1.42906 * 109.47264 * 300.25171 * 20 19 18 22 22 Si 1.86296 * 109.47164 * 180.25335 * 20 19 18 23 23 C 1.38240 * 120.05542 * 0.47962 * 19 18 17 24 24 C 1.38292 * 120.11135 * 359.77309 * 23 19 18 25 25 C 1.38120 * 120.05478 * 359.97438 * 24 23 19 26 26 C 1.53781 * 87.08570 * 334.56897 * 8 7 5 27 27 H 1.09000 * 109.47265 * 299.99879 * 1 2 3 28 28 H 1.09008 * 109.47163 * 59.99606 * 1 2 3 29 29 H 1.09001 * 109.46996 * 179.97438 * 1 2 3 30 30 H 1.09000 * 113.61119 * 25.44095 * 7 5 3 31 31 H 1.08994 * 113.61563 * 254.53731 * 7 5 3 32 32 H 0.96999 * 119.99694 * 72.49884 * 10 8 7 33 33 H 1.09000 * 109.47318 * 299.99141 * 13 11 10 34 34 H 1.09000 * 109.47161 * 59.99772 * 13 11 10 35 35 H 1.09004 * 109.46930 * 299.99901 * 14 13 11 36 36 H 1.09004 * 109.47059 * 59.99503 * 14 13 11 37 37 H 1.09004 * 109.46785 * 299.99692 * 15 14 13 38 38 H 1.09000 * 109.47196 * 59.99588 * 15 14 13 39 39 H 1.08007 * 120.02438 * 359.97438 * 18 17 16 40 40 H 1.08997 * 109.47685 * 60.24673 * 20 19 18 41 41 H 0.96706 * 113.99798 * 300.00506 * 21 20 19 42 42 H 1.48501 * 110.00170 * 58.67771 * 22 20 19 43 43 H 1.48499 * 110.00261 * 179.97438 * 22 20 19 44 44 H 1.08000 * 119.94192 * 179.74632 * 23 19 18 45 45 H 1.08001 * 119.96642 * 179.97438 * 24 23 19 46 46 H 1.08002 * 120.02630 * 179.97438 * 25 24 23 47 47 H 1.08997 * 113.61529 * 139.97700 * 26 8 7 48 48 H 1.08994 * 113.61503 * 270.88294 * 26 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1960 0.0000 4 8 1.4033 2.2094 0.0005 5 6 3.5663 1.2749 0.0006 6 1 4.0233 0.6365 0.7567 7 6 4.1917 1.1233 -1.3962 8 6 5.1813 2.2267 -0.9866 9 1 6.0816 1.8495 -0.5013 10 7 5.4709 3.1828 -2.0582 11 6 6.6691 3.1613 -2.6749 12 8 7.5078 2.3509 -2.3425 13 6 6.9666 4.1445 -3.7776 14 6 8.3839 3.9079 -4.3032 15 6 8.6862 4.9064 -5.4223 16 8 10.0097 4.6849 -5.9135 17 6 10.4383 5.4935 -6.9183 18 6 11.7145 5.3379 -7.4390 19 6 12.1460 6.1581 -8.4636 20 6 13.5305 5.9861 -9.0334 21 8 14.4983 6.1786 -7.9997 22 14 13.8065 7.2395 -10.3837 23 6 11.3107 7.1398 -8.9632 24 6 10.0398 7.3004 -8.4422 25 6 9.6018 6.4796 -7.4214 26 6 4.1077 2.7143 0.0005 27 1 -0.3634 0.5138 0.8900 28 1 -0.3634 0.5139 -0.8900 29 1 -0.3633 -1.0277 -0.0005 30 1 3.5243 1.4146 -2.2073 31 1 4.6620 0.1540 -1.5611 32 1 4.8002 3.8312 -2.3239 33 1 6.2508 4.0088 -4.5884 34 1 6.8881 5.1602 -3.3898 35 1 9.0995 4.0439 -3.4923 36 1 8.4628 2.8921 -4.6908 37 1 7.9706 4.7708 -6.2333 38 1 8.6074 5.9219 -5.0342 39 1 12.3690 4.5739 -7.0459 40 1 13.6324 4.9815 -9.4438 41 1 14.4656 7.0531 -7.5882 42 1 13.6391 8.6128 -9.8439 43 1 15.1687 7.0808 -10.9534 44 1 11.6514 7.7826 -9.7614 45 1 9.3892 8.0684 -8.8340 46 1 8.6093 6.6057 -7.0146 47 1 4.5104 3.0293 0.9632 48 1 3.4174 3.4404 -0.4287 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10970304_4549616.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:36:16 Heat of formation + Delta-G solvation = -142.451656 kcal Electronic energy + Delta-G solvation = -28911.717117 eV Core-core repulsion = 24513.537183 eV Total energy + Delta-G solvation = -4398.179934 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 350.165 amu Computer time = 1.21 seconds Orbital eigenvalues (eV) -42.00451 -41.28042 -40.86587 -39.38013 -39.07467 -37.38552 -37.33336 -34.94251 -34.56238 -32.45636 -31.25395 -29.58072 -28.55383 -26.98678 -26.98109 -26.51999 -23.85529 -23.58502 -22.38354 -21.85735 -21.57227 -20.68358 -19.20693 -18.97359 -18.19792 -17.98678 -17.82871 -17.53918 -17.42283 -17.18010 -16.86301 -16.50024 -16.42839 -16.25646 -16.08997 -15.47324 -15.10509 -14.85804 -14.78455 -14.41948 -14.31459 -14.15581 -14.04607 -13.77040 -13.65906 -13.46320 -13.29421 -13.07731 -13.03891 -12.75310 -12.59054 -12.43449 -12.38699 -12.28345 -11.92037 -11.90910 -11.82917 -11.67789 -11.54124 -11.41010 -10.90737 -10.63739 -10.17876 -9.90453 -9.21495 -4.94074 0.22797 0.43563 1.10110 1.28550 1.54171 1.58346 1.61996 1.89853 1.99575 2.33709 2.69264 3.11470 3.19080 3.38753 3.48583 3.54055 3.62575 3.64136 3.76714 3.79431 3.87356 3.92377 4.01750 4.10771 4.12361 4.15752 4.19667 4.21297 4.23933 4.35402 4.40587 4.42179 4.44691 4.48956 4.55587 4.57529 4.66374 4.67512 4.74563 4.93528 4.97411 4.99425 5.13582 5.29406 5.32619 5.38499 5.39150 5.45917 5.71464 6.35611 6.42078 6.42756 6.68137 7.12623 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.357 6.357 3 C 0.472 3.528 4 O -0.505 6.505 5 C -0.109 4.109 6 H 0.132 0.868 7 C -0.134 4.134 8 C 0.125 3.875 9 H 0.125 0.875 10 N -0.722 5.722 11 C 0.516 3.484 12 O -0.532 6.532 13 C -0.139 4.139 14 C -0.105 4.105 15 C 0.059 3.941 16 O -0.311 6.311 17 C 0.132 3.868 18 C -0.126 4.126 19 C -0.079 4.079 20 C -0.077 4.077 21 O -0.528 6.528 22 Si 0.689 3.311 23 C -0.156 4.156 24 C -0.074 4.074 25 C -0.205 4.205 26 C -0.127 4.127 27 H 0.064 0.936 28 H 0.064 0.936 29 H 0.104 0.896 30 H 0.091 0.909 31 H 0.090 0.910 32 H 0.404 0.596 33 H 0.099 0.901 34 H 0.099 0.901 35 H 0.083 0.917 36 H 0.084 0.916 37 H 0.064 0.936 38 H 0.064 0.936 39 H 0.134 0.866 40 H 0.120 0.880 41 H 0.376 0.624 42 H -0.260 1.260 43 H -0.257 1.257 44 H 0.129 0.871 45 H 0.130 0.870 46 H 0.130 0.870 47 H 0.089 0.911 48 H 0.103 0.897 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.527 1.641 -1.734 6.020 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.273 6.273 3 C 0.315 3.685 4 O -0.393 6.393 5 C -0.129 4.129 6 H 0.150 0.850 7 C -0.173 4.173 8 C 0.019 3.981 9 H 0.142 0.858 10 N -0.373 5.373 11 C 0.303 3.697 12 O -0.408 6.408 13 C -0.179 4.179 14 C -0.143 4.143 15 C -0.016 4.016 16 O -0.225 6.225 17 C 0.087 3.913 18 C -0.145 4.145 19 C -0.079 4.079 20 C -0.186 4.186 21 O -0.334 6.334 22 Si 0.590 3.410 23 C -0.174 4.174 24 C -0.092 4.092 25 C -0.224 4.224 26 C -0.165 4.165 27 H 0.083 0.917 28 H 0.082 0.918 29 H 0.122 0.878 30 H 0.110 0.890 31 H 0.108 0.892 32 H 0.239 0.761 33 H 0.117 0.883 34 H 0.117 0.883 35 H 0.102 0.898 36 H 0.103 0.897 37 H 0.083 0.917 38 H 0.082 0.918 39 H 0.152 0.848 40 H 0.138 0.862 41 H 0.224 0.776 42 H -0.185 1.185 43 H -0.182 1.182 44 H 0.146 0.854 45 H 0.148 0.852 46 H 0.147 0.853 47 H 0.107 0.893 48 H 0.121 0.879 Dipole moment (debyes) X Y Z Total from point charges -4.406 1.253 -1.827 4.932 hybrid contribution -0.731 0.815 1.078 1.536 sum -5.137 2.068 -0.750 5.588 Atomic orbital electron populations 1.23333 0.75880 1.04068 1.02706 1.86522 1.23765 1.33250 1.83731 1.23477 0.91578 0.81437 0.72036 1.90684 1.67001 1.36431 1.45164 1.22318 0.87710 1.01025 1.01844 0.85021 1.23451 0.97972 1.01271 0.94582 1.22436 0.97792 0.89633 0.88197 0.85768 1.45967 1.16575 1.37130 1.37674 1.20626 0.81500 0.84685 0.82881 1.90754 1.46261 1.39076 1.64725 1.21543 0.98713 0.99850 0.97768 1.21233 0.95346 1.00133 0.97615 1.22824 0.82203 0.99753 0.96796 1.86086 1.32473 1.55133 1.48796 1.19022 0.93523 0.90286 0.88498 1.20275 0.93857 1.02090 0.98272 1.20084 0.96275 0.95409 0.96179 1.25094 0.85544 1.10755 0.97253 1.86614 1.56292 1.38415 1.52113 0.94922 0.85117 0.77342 0.83596 1.20919 0.95052 0.99650 1.01743 1.20909 0.95458 0.97908 0.94899 1.21317 1.00766 0.98791 1.01499 1.23382 0.97155 0.94930 1.01018 0.91692 0.91772 0.87799 0.89041 0.89152 0.76143 0.88282 0.88278 0.89784 0.89745 0.91729 0.91792 0.84786 0.86185 0.77611 1.18504 1.18219 0.85403 0.85222 0.85262 0.89279 0.87891 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 101.05 1.07 1.03 16 2 O -0.36 -0.36 10.57 -39.24 -0.41 -0.77 16 3 C 0.47 0.53 7.48 36.01 0.27 0.80 16 4 O -0.51 -1.88 15.65 -18.75 -0.29 -2.18 16 5 C -0.11 0.19 4.26 -90.95 -0.39 -0.20 16 6 H 0.13 -0.43 8.14 -51.93 -0.42 -0.85 16 7 C -0.13 0.26 7.43 -25.92 -0.19 0.07 16 8 C 0.12 -0.22 4.24 -67.12 -0.28 -0.51 16 9 H 0.12 -0.08 7.46 -51.93 -0.39 -0.47 16 10 N -0.72 1.64 5.35 -53.02 -0.28 1.36 16 11 C 0.52 -0.07 7.83 -10.98 -0.09 -0.15 16 12 O -0.53 -2.29 15.58 5.56 0.09 -2.20 16 13 C -0.14 0.43 5.70 -27.88 -0.16 0.27 16 14 C -0.11 0.07 4.87 -26.73 -0.13 -0.06 16 15 C 0.06 -0.07 4.74 37.16 0.18 0.11 16 16 O -0.31 -0.71 10.14 -19.44 -0.20 -0.91 16 17 C 0.13 0.27 6.69 -39.22 -0.26 0.01 16 18 C -0.13 -0.28 9.55 -39.43 -0.38 -0.66 16 19 C -0.08 -0.07 5.39 -104.65 -0.56 -0.64 16 20 C -0.08 -0.03 2.82 36.00 0.10 0.08 16 21 O -0.53 -1.00 12.76 -35.23 -0.45 -1.45 16 22 Si 0.69 -0.51 29.79 -169.99 -5.06 -5.57 16 23 C -0.16 0.02 8.67 -39.56 -0.34 -0.33 16 24 C -0.07 0.03 10.04 -39.60 -0.40 -0.37 16 25 C -0.20 -0.05 9.04 -39.43 -0.36 -0.40 16 26 C -0.13 0.29 7.16 -25.92 -0.19 0.10 16 27 H 0.06 -0.06 8.13 -51.93 -0.42 -0.48 16 28 H 0.06 -0.06 8.14 -51.92 -0.42 -0.49 16 29 H 0.10 -0.33 8.14 -51.93 -0.42 -0.76 16 30 H 0.09 -0.17 8.09 -51.93 -0.42 -0.59 16 31 H 0.09 -0.17 8.14 -51.93 -0.42 -0.59 16 32 H 0.40 -1.90 8.73 -40.82 -0.36 -2.25 16 33 H 0.10 -0.50 8.14 -51.93 -0.42 -0.92 16 34 H 0.10 -0.50 8.14 -51.93 -0.42 -0.92 16 35 H 0.08 0.08 8.10 -51.93 -0.42 -0.35 16 36 H 0.08 0.07 8.10 -51.93 -0.42 -0.35 16 37 H 0.06 -0.16 7.66 -51.93 -0.40 -0.56 16 38 H 0.06 -0.15 7.66 -51.93 -0.40 -0.55 16 39 H 0.13 0.35 8.06 -52.48 -0.42 -0.08 16 40 H 0.12 -0.04 7.96 -51.93 -0.41 -0.45 16 41 H 0.38 -0.36 8.70 45.56 0.40 0.03 16 42 H -0.26 -0.30 7.11 56.52 0.40 0.10 16 43 H -0.26 -0.66 7.11 56.52 0.40 -0.25 16 44 H 0.13 -0.25 4.87 -52.49 -0.26 -0.50 16 45 H 0.13 -0.34 8.06 -52.49 -0.42 -0.77 16 46 H 0.13 -0.24 6.30 -52.49 -0.33 -0.57 16 47 H 0.09 -0.25 8.14 -51.93 -0.42 -0.67 16 48 H 0.10 -0.17 7.41 -51.93 -0.38 -0.56 16 LS Contribution 402.80 15.07 6.07 6.07 Total: 0.00 -10.48 402.80 -9.87 -20.35 By element: Atomic # 1 Polarization: -6.63 SS G_CDS: -7.21 Total: -13.84 kcal Atomic # 6 Polarization: 1.26 SS G_CDS: -2.11 Total: -0.85 kcal Atomic # 7 Polarization: 1.64 SS G_CDS: -0.28 Total: 1.36 kcal Atomic # 8 Polarization: -6.24 SS G_CDS: -1.27 Total: -7.50 kcal Atomic # 14 Polarization: -0.51 SS G_CDS: -5.06 Total: -5.57 kcal Total LS contribution 6.07 Total: 6.07 kcal Total: -10.48 -9.87 -20.35 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10970304_4549616.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -122.106 kcal (2) G-P(sol) polarization free energy of solvation -10.475 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -132.581 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.870 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.346 kcal (6) G-S(sol) free energy of system = (1) + (5) -142.452 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.21 seconds