Wall clock time and date at job start Sat Mar 6 2021 15:36:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45199 * 1 3 3 C 1.34234 * 116.99947 * 2 1 4 4 O 1.20822 * 120.00090 * 0.02562 * 3 2 1 5 5 C 1.50702 * 119.99997 * 179.72219 * 3 2 1 6 6 H 1.09004 * 112.84690 * 48.80531 * 5 3 2 7 7 C 1.53778 * 113.61409 * 180.02562 * 5 3 2 8 8 C 1.53778 * 87.07880 * 139.98529 * 7 5 3 9 9 H 1.09002 * 113.61677 * 89.12041 * 8 7 5 10 10 N 1.46503 * 113.61357 * 219.93557 * 8 7 5 11 11 C 1.34775 * 120.00605 * 205.00223 * 10 8 7 12 12 O 1.21559 * 119.99658 * 359.97438 * 11 10 8 13 13 C 1.47841 * 120.00350 * 179.97438 * 11 10 8 14 14 C 1.39562 * 120.14310 * 179.71913 * 13 11 10 15 15 C 1.37975 * 119.85269 * 179.81163 * 14 13 11 16 16 C 1.50696 * 119.93209 * 180.21031 * 15 14 13 17 17 O 1.42902 * 109.47045 * 270.23658 * 16 15 14 18 18 C 1.35901 * 116.99852 * 179.97438 * 17 16 15 19 19 C 1.38707 * 120.05353 * 180.02562 * 18 17 16 20 20 C 1.38173 * 119.94226 * 179.97438 * 19 18 17 21 21 C 1.50701 * 119.97226 * 180.02562 * 20 19 18 22 22 O 1.42906 * 109.47194 * 300.00330 * 21 20 19 23 23 Si 1.86295 * 109.47123 * 180.02562 * 21 20 19 24 24 C 1.38246 * 120.05465 * 0.02562 * 20 19 18 25 25 C 1.38283 * 120.11312 * 0.02562 * 24 20 19 26 26 C 1.38127 * 120.05302 * 359.68909 * 25 24 20 27 27 C 1.38339 * 120.14419 * 0.44689 * 15 14 13 28 28 C 1.38385 * 120.29006 * 359.78533 * 27 15 14 29 29 C 1.37928 * 120.14665 * 0.02562 * 28 27 15 30 30 C 1.53779 * 113.61510 * 277.50185 * 5 3 2 31 31 H 1.08997 * 109.46967 * 299.99772 * 1 2 3 32 32 H 1.09002 * 109.46640 * 59.99976 * 1 2 3 33 33 H 1.08997 * 109.46765 * 179.97438 * 1 2 3 34 34 H 1.09001 * 113.61184 * 254.53062 * 7 5 3 35 35 H 1.08992 * 113.61407 * 25.43168 * 7 5 3 36 36 H 0.97003 * 119.99874 * 24.99236 * 10 8 7 37 37 H 1.07997 * 120.07265 * 0.02629 * 14 13 11 38 38 H 1.09006 * 109.46994 * 30.23327 * 16 15 14 39 39 H 1.08992 * 109.47531 * 150.23059 * 16 15 14 40 40 H 1.08000 * 120.03216 * 359.97225 * 19 18 17 41 41 H 1.08998 * 109.46776 * 60.00404 * 21 20 19 42 42 H 0.96701 * 113.99753 * 300.00223 * 22 21 20 43 43 H 1.48501 * 110.00068 * 180.02562 * 23 21 20 44 44 H 1.48500 * 110.00022 * 301.32161 * 23 21 20 45 45 H 1.08000 * 119.94218 * 179.97438 * 24 20 19 46 46 H 1.08001 * 119.97409 * 179.97438 * 25 24 20 47 47 H 1.08000 * 120.02626 * 180.32113 * 26 25 24 48 48 H 1.07998 * 119.85721 * 179.76663 * 27 15 14 49 49 H 1.08004 * 119.92571 * 179.97438 * 28 27 15 50 50 H 1.08005 * 120.07059 * 179.97438 * 29 28 27 51 51 H 1.08995 * 113.61442 * 334.56320 * 30 5 3 52 52 H 1.08996 * 113.61596 * 105.46908 * 30 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4034 2.2093 0.0005 5 6 3.5663 1.2749 0.0063 6 1 4.0269 0.6347 -0.7462 7 6 4.1077 2.7143 0.0061 8 6 5.1768 2.2285 0.9991 9 1 6.0787 1.8491 0.5187 10 7 5.4627 3.1874 2.0691 11 6 6.6583 3.1668 2.6909 12 8 7.4993 2.3522 2.3641 13 6 6.9470 4.1349 3.7704 14 6 8.1819 4.1123 4.4202 15 6 8.4464 5.0211 5.4242 16 6 9.7809 5.0014 6.1238 17 8 9.7142 4.1275 7.2524 18 6 10.8430 3.9948 7.9975 19 6 10.8492 3.1622 9.1069 20 6 11.9983 3.0287 9.8625 21 6 12.0059 2.1238 11.0677 22 8 11.0254 2.5717 12.0059 23 14 13.6898 2.1637 11.8635 24 6 13.1409 3.7243 9.5139 25 6 13.1370 4.5558 8.4090 26 6 11.9926 4.6882 7.6470 27 6 7.4873 5.9472 5.7933 28 6 6.2590 5.9717 5.1563 29 6 5.9833 5.0713 4.1485 30 6 4.1851 1.1266 1.4063 31 1 -0.3633 0.5138 0.8900 32 1 -0.3633 0.5139 -0.8900 33 1 -0.3633 -1.0277 -0.0005 34 1 4.5149 3.0274 -0.9553 35 1 3.4155 3.4412 0.4307 36 1 4.7915 3.8374 2.3301 37 1 8.9301 3.3875 4.1355 38 1 10.5473 4.6468 5.4345 39 1 10.0308 6.0083 6.4581 40 1 9.9567 2.6189 9.3799 41 1 11.7739 1.1048 10.7583 42 1 11.1693 3.4732 12.3249 43 1 13.7107 1.2749 13.0529 44 1 14.7228 1.7309 10.8884 45 1 14.0380 3.6189 10.1061 46 1 14.0308 5.0986 8.1390 47 1 11.9915 5.3337 6.7811 48 1 7.6978 6.6539 6.5823 49 1 5.5144 6.6970 5.4495 50 1 5.0241 5.0913 3.6524 51 1 3.5140 1.4197 2.2136 52 1 4.6547 0.1576 1.5757 There are 73 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 73 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10970304_4549630.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:36:18 Heat of formation + Delta-G solvation = -99.679408 kcal Electronic energy + Delta-G solvation = -34959.974370 eV Core-core repulsion = 30050.744619 eV Total energy + Delta-G solvation = -4909.229752 eV No. of doubly occupied orbitals = 73 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 398.165 amu Computer time = 1.81 seconds Orbital eigenvalues (eV) -42.07499 -41.50393 -41.15225 -40.02570 -39.19414 -38.72531 -37.45712 -37.24886 -34.94116 -33.32414 -32.45430 -32.20367 -31.05370 -29.41547 -27.81594 -27.07458 -26.86821 -26.60634 -24.97747 -23.65997 -23.17158 -22.53409 -22.12015 -21.45886 -20.67129 -19.22170 -19.07191 -18.75230 -18.07139 -17.83236 -17.47942 -17.35831 -17.20120 -17.14060 -16.92586 -16.57720 -16.36240 -16.14313 -16.00460 -15.76835 -15.49287 -15.25730 -14.91227 -14.81608 -14.57019 -14.46449 -14.31262 -14.19992 -13.94831 -13.71480 -13.58915 -13.47767 -13.42424 -13.03432 -12.91537 -12.82787 -12.59933 -12.55495 -12.35684 -12.17798 -12.02410 -11.93793 -11.87505 -11.84565 -11.64843 -11.46401 -11.12763 -10.51953 -10.32069 -10.05410 -9.98029 -9.92197 -9.26467 -4.99373 -0.29451 0.13537 0.20406 0.39671 1.03171 1.29677 1.61186 1.63824 1.65139 1.95541 2.07274 2.24245 2.67427 2.84621 3.20265 3.28315 3.45462 3.52987 3.56877 3.62754 3.67218 3.72237 3.75791 3.84470 3.97388 3.99680 4.07533 4.08844 4.17220 4.23198 4.24015 4.25058 4.26872 4.39495 4.42778 4.50657 4.52035 4.53903 4.59451 4.64892 4.66771 4.70935 4.79340 4.87420 4.88967 4.97722 5.01896 5.15593 5.25337 5.28662 5.30444 5.36614 5.37949 5.41008 5.44349 5.71238 5.76412 6.36421 6.37195 6.62068 6.74926 7.04130 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.364 6.364 3 C 0.472 3.528 4 O -0.535 6.535 5 C -0.105 4.105 6 H 0.152 0.848 7 C -0.117 4.117 8 C 0.123 3.877 9 H 0.117 0.883 10 N -0.702 5.702 11 C 0.560 3.440 12 O -0.577 6.577 13 C -0.157 4.157 14 C -0.053 4.053 15 C -0.114 4.114 16 C 0.099 3.901 17 O -0.328 6.328 18 C 0.116 3.884 19 C -0.148 4.148 20 C -0.084 4.084 21 C -0.083 4.083 22 O -0.556 6.556 23 Si 0.792 3.208 24 C -0.159 4.159 25 C -0.072 4.072 26 C -0.208 4.208 27 C -0.067 4.067 28 C -0.126 4.126 29 C -0.070 4.070 30 C -0.131 4.131 31 H 0.061 0.939 32 H 0.062 0.938 33 H 0.127 0.873 34 H 0.101 0.899 35 H 0.100 0.900 36 H 0.415 0.585 37 H 0.120 0.880 38 H 0.078 0.922 39 H 0.097 0.903 40 H 0.117 0.883 41 H 0.102 0.898 42 H 0.396 0.604 43 H -0.300 1.300 44 H -0.283 1.283 45 H 0.148 0.852 46 H 0.158 0.842 47 H 0.149 0.851 48 H 0.151 0.849 49 H 0.163 0.837 50 H 0.156 0.844 51 H 0.090 0.910 52 H 0.091 0.909 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.149 6.304 -0.020 6.306 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.281 6.281 3 C 0.316 3.684 4 O -0.425 6.425 5 C -0.124 4.124 6 H 0.169 0.831 7 C -0.155 4.155 8 C 0.018 3.982 9 H 0.135 0.865 10 N -0.354 5.354 11 C 0.349 3.651 12 O -0.458 6.458 13 C -0.160 4.160 14 C -0.073 4.073 15 C -0.114 4.114 16 C 0.025 3.975 17 O -0.243 6.243 18 C 0.071 3.929 19 C -0.167 4.167 20 C -0.085 4.085 21 C -0.192 4.192 22 O -0.364 6.364 23 Si 0.697 3.303 24 C -0.177 4.177 25 C -0.090 4.090 26 C -0.226 4.226 27 C -0.086 4.086 28 C -0.144 4.144 29 C -0.088 4.088 30 C -0.170 4.170 31 H 0.080 0.920 32 H 0.081 0.919 33 H 0.145 0.855 34 H 0.119 0.881 35 H 0.119 0.881 36 H 0.253 0.747 37 H 0.138 0.862 38 H 0.096 0.904 39 H 0.115 0.885 40 H 0.135 0.865 41 H 0.119 0.881 42 H 0.246 0.754 43 H -0.228 1.228 44 H -0.210 1.210 45 H 0.165 0.835 46 H 0.176 0.824 47 H 0.167 0.833 48 H 0.169 0.831 49 H 0.181 0.819 50 H 0.173 0.827 51 H 0.109 0.891 52 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges 0.446 4.883 -0.134 4.905 hybrid contribution -1.117 -0.331 -0.588 1.304 sum -0.670 4.552 -0.722 4.657 Atomic orbital electron populations 1.23529 0.74992 1.05586 1.02511 1.86526 1.24815 1.33244 1.83467 1.23951 0.92440 0.81026 0.70993 1.90662 1.67830 1.37273 1.46686 1.22420 0.86065 1.01726 1.02189 0.83074 1.23333 0.96394 0.94666 1.01130 1.22463 0.97848 0.89740 0.88137 0.86493 1.45767 1.15828 1.36808 1.36954 1.18539 0.81910 0.83045 0.81605 1.90772 1.47831 1.40709 1.66450 1.19893 0.96723 0.99724 0.99678 1.21178 0.95959 0.96228 0.93888 1.19537 0.96529 0.97927 0.97443 1.21747 0.94937 0.94823 0.85984 1.86133 1.33660 1.64347 1.40176 1.19179 0.86187 0.95804 0.91686 1.20293 0.99538 1.01637 0.95227 1.20221 0.93395 0.97974 0.96875 1.25364 1.05756 0.98284 0.89748 1.86471 1.52175 1.37350 1.60450 0.93537 0.71800 0.88041 0.76880 1.21185 0.97773 0.99143 0.99570 1.21294 0.98208 0.96337 0.93153 1.21583 0.93129 1.04149 1.03752 1.21654 0.92435 0.96706 0.97766 1.21517 0.97524 0.99566 0.95793 1.21684 0.98536 0.92553 0.96046 1.23422 0.97707 1.01174 0.94651 0.91981 0.91900 0.85503 0.88051 0.88138 0.74683 0.86183 0.90356 0.88457 0.86517 0.88055 0.75431 1.22790 1.20996 0.83462 0.82443 0.83345 0.83119 0.81943 0.82652 0.89137 0.89035 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 10.56 113.37 1.20 1.16 16 2 O -0.36 -0.96 10.57 -51.46 -0.54 -1.50 16 3 C 0.47 1.41 7.48 71.24 0.53 1.94 16 4 O -0.53 -4.47 15.65 21.98 0.34 -4.13 16 5 C -0.10 0.31 4.26 -11.01 -0.05 0.26 16 6 H 0.15 -1.03 8.14 -2.38 -0.02 -1.05 16 7 C -0.12 0.47 7.16 31.12 0.22 0.69 16 8 C 0.12 -0.22 4.24 45.50 0.19 -0.02 16 9 H 0.12 0.07 7.46 -2.39 -0.02 0.05 16 10 N -0.70 0.74 5.31 -442.96 -2.35 -1.61 16 11 C 0.56 3.24 7.77 86.79 0.67 3.92 16 12 O -0.58 -8.09 15.95 -3.90 -0.06 -8.15 16 13 C -0.16 -0.49 5.87 -20.09 -0.12 -0.61 16 14 C -0.05 -0.27 9.25 22.53 0.21 -0.06 16 15 C -0.11 -0.17 5.50 -19.90 -0.11 -0.28 16 16 C 0.10 0.00 4.86 71.23 0.35 0.35 16 17 O -0.33 -2.02 10.12 -92.44 -0.94 -2.95 16 18 C 0.12 0.60 6.69 22.50 0.15 0.75 16 19 C -0.15 -0.94 9.55 22.37 0.21 -0.73 16 20 C -0.08 -0.22 5.39 -19.88 -0.11 -0.33 16 21 C -0.08 -0.15 2.82 71.24 0.20 0.05 16 22 O -0.56 -1.42 12.77 -148.98 -1.90 -3.32 16 23 Si 0.79 -1.29 29.78 68.60 2.04 0.75 16 24 C -0.16 0.13 8.67 22.28 0.19 0.33 16 25 C -0.07 0.13 10.04 22.25 0.22 0.36 16 26 C -0.21 -0.07 9.04 22.37 0.20 0.13 16 27 C -0.07 0.17 9.69 22.33 0.22 0.38 16 28 C -0.13 0.58 10.03 22.23 0.22 0.80 16 29 C -0.07 0.23 9.54 22.52 0.21 0.44 16 30 C -0.13 0.31 7.43 31.11 0.23 0.54 16 31 H 0.06 -0.06 8.13 -2.39 -0.02 -0.08 16 32 H 0.06 -0.06 8.13 -2.39 -0.02 -0.08 16 33 H 0.13 -0.83 8.14 -2.39 -0.02 -0.85 16 34 H 0.10 -0.60 8.14 -2.39 -0.02 -0.62 16 35 H 0.10 -0.30 7.41 -2.39 -0.02 -0.31 16 36 H 0.41 -2.69 6.76 -92.71 -0.63 -3.32 16 37 H 0.12 0.95 7.65 -2.91 -0.02 0.92 16 38 H 0.08 -0.10 7.59 -2.38 -0.02 -0.11 16 39 H 0.10 -0.47 7.61 -2.39 -0.02 -0.49 16 40 H 0.12 1.00 8.06 -2.91 -0.02 0.98 16 41 H 0.10 0.39 7.96 -2.39 -0.02 0.37 16 42 H 0.40 -2.39 8.70 -74.06 -0.64 -3.03 16 43 H -0.30 -1.74 7.11 99.48 0.71 -1.04 16 44 H -0.28 -0.73 7.11 99.48 0.71 -0.02 16 45 H 0.15 -0.80 4.87 -2.91 -0.01 -0.81 16 46 H 0.16 -1.19 8.06 -2.91 -0.02 -1.22 16 47 H 0.15 -0.62 6.30 -2.91 -0.02 -0.64 16 48 H 0.15 -1.01 8.06 -2.91 -0.02 -1.04 16 49 H 0.16 -1.66 8.06 -2.91 -0.02 -1.68 16 50 H 0.16 -1.49 6.41 -2.91 -0.02 -1.51 16 51 H 0.09 -0.17 8.09 -2.39 -0.02 -0.19 16 52 H 0.09 -0.20 8.14 -2.39 -0.02 -0.22 16 Total: 0.00 -28.22 438.08 1.40 -26.81 By element: Atomic # 1 Polarization: -15.72 SS G_CDS: -0.25 Total: -15.97 kcal Atomic # 6 Polarization: 5.01 SS G_CDS: 5.06 Total: 10.07 kcal Atomic # 7 Polarization: 0.74 SS G_CDS: -2.35 Total: -1.61 kcal Atomic # 8 Polarization: -16.96 SS G_CDS: -3.10 Total: -20.06 kcal Atomic # 14 Polarization: -1.29 SS G_CDS: 2.04 Total: 0.75 kcal Total: -28.22 1.40 -26.81 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10970304_4549630.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -72.866 kcal (2) G-P(sol) polarization free energy of solvation -28.217 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -101.083 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.403 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.814 kcal (6) G-S(sol) free energy of system = (1) + (5) -99.679 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.81 seconds