Wall clock time and date at job start Sat Mar 6 2021 15:36:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45200 * 1 3 3 C 1.34230 * 117.00081 * 2 1 4 4 O 1.20816 * 120.00389 * 0.02562 * 3 2 1 5 5 C 1.50707 * 119.99587 * 180.02562 * 3 2 1 6 6 H 1.09000 * 112.84794 * 311.19094 * 5 3 2 7 7 C 1.53774 * 113.61960 * 82.50136 * 5 3 2 8 8 C 1.53779 * 87.08399 * 139.97960 * 7 5 3 9 9 H 1.08991 * 113.69002 * 89.12882 * 8 7 5 10 10 N 1.46498 * 113.61326 * 220.01966 * 8 7 5 11 11 C 1.34775 * 120.00476 * 252.49526 * 10 8 7 12 12 O 1.21700 * 119.99174 * 0.02562 * 11 10 8 13 13 C 1.46653 * 120.00289 * 180.02562 * 11 10 8 14 14 C 1.36541 * 125.98363 * 179.97438 * 13 11 10 15 15 C 1.50704 * 126.64918 * 0.02562 * 14 13 11 16 16 C 1.40365 * 106.70560 * 179.74829 * 14 13 11 17 17 C 1.35132 * 107.11472 * 0.37641 * 16 14 13 18 18 C 1.50703 * 125.61594 * 179.88234 * 17 16 14 19 19 O 1.42904 * 109.47020 * 89.71565 * 18 17 16 20 20 C 1.35895 * 116.99866 * 179.97438 * 19 18 17 21 21 C 1.38735 * 120.05190 * 180.02562 * 20 19 18 22 22 C 1.38147 * 119.94129 * 179.97438 * 21 20 19 23 23 C 1.38267 * 120.05789 * 359.97438 * 22 21 20 24 24 C 1.50699 * 119.94534 * 179.97438 * 23 22 21 25 25 O 1.42895 * 109.47158 * 299.99634 * 24 23 22 26 26 Si 1.86300 * 109.46944 * 180.02562 * 24 23 22 27 27 C 1.38271 * 120.10847 * 0.27231 * 23 22 21 28 28 C 1.38146 * 120.05540 * 359.45178 * 27 23 22 29 29 O 1.33925 * 108.76605 * 359.61656 * 17 16 14 30 30 C 1.53776 * 113.61206 * 180.02562 * 5 3 2 31 31 H 1.08999 * 109.46855 * 59.99871 * 1 2 3 32 32 H 1.08994 * 109.47420 * 180.02562 * 1 2 3 33 33 H 1.09003 * 109.46721 * 299.99930 * 1 2 3 34 34 H 1.09005 * 113.61095 * 25.42395 * 7 5 3 35 35 H 1.09001 * 113.61426 * 254.53596 * 7 5 3 36 36 H 0.97001 * 119.99997 * 72.49947 * 10 8 7 37 37 H 1.08996 * 109.47052 * 89.99858 * 15 14 13 38 38 H 1.08996 * 109.46982 * 209.99689 * 15 14 13 39 39 H 1.08994 * 109.46681 * 329.99725 * 15 14 13 40 40 H 1.08002 * 126.44617 * 180.27267 * 16 14 13 41 41 H 1.08994 * 109.47190 * 329.72251 * 18 17 16 42 42 H 1.08999 * 109.46790 * 209.71308 * 18 17 16 43 43 H 1.07993 * 120.03328 * 359.95220 * 21 20 19 44 44 H 1.07996 * 119.97399 * 179.97438 * 22 21 20 45 45 H 1.09000 * 109.47247 * 60.00087 * 24 23 22 46 46 H 0.96698 * 114.00355 * 300.00487 * 25 24 23 47 47 H 1.48506 * 110.00048 * 180.02562 * 26 24 23 48 48 H 1.48502 * 109.99996 * 301.31619 * 26 24 23 49 49 H 1.08003 * 119.96738 * 179.72707 * 27 23 22 50 50 H 1.08003 * 120.02766 * 180.26922 * 28 27 23 51 51 H 1.08998 * 113.62179 * 105.46258 * 30 5 3 52 52 H 1.09002 * 113.69189 * 334.57270 * 30 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4035 2.2093 0.0005 5 6 3.5664 1.2747 -0.0006 6 1 4.0239 0.6361 0.7550 7 6 4.1907 1.1236 -1.3977 8 6 5.1809 2.2268 -0.9885 9 1 6.0813 1.8493 -0.5041 10 7 5.4696 3.1831 -2.0601 11 6 6.6673 3.1619 -2.6777 12 8 7.5088 2.3479 -2.3454 13 6 6.9565 4.1197 -3.7500 14 6 8.1229 4.2072 -4.4544 15 6 9.3464 3.3450 -4.2793 16 6 7.9592 5.2517 -5.3777 17 6 6.7188 5.7551 -5.1929 18 6 6.1109 6.8970 -5.9660 19 8 5.4359 6.3867 -7.1176 20 6 4.8282 7.2923 -7.9283 21 6 4.1541 6.8662 -9.0635 22 6 3.5367 7.7888 -9.8858 23 6 3.5897 9.1357 -9.5779 24 6 2.9158 10.1400 -10.4770 25 8 3.4819 10.0621 -11.7867 26 14 3.1690 11.8542 -9.7928 27 6 4.2653 9.5633 -8.4498 28 6 4.8795 8.6442 -7.6212 29 8 6.1166 5.0682 -4.2135 30 6 4.1079 2.7140 0.0001 31 1 -0.3633 0.5139 -0.8900 32 1 -0.3634 -1.0276 0.0005 33 1 -0.3633 0.5138 0.8900 34 1 3.5227 1.4150 -2.2083 35 1 4.6609 0.1542 -1.5633 36 1 4.7987 3.8317 -2.3251 37 1 9.2729 2.4735 -4.9297 38 1 10.2356 3.9189 -4.5400 39 1 9.4157 3.0191 -3.2415 40 1 8.6881 5.5906 -6.0990 41 1 6.8978 7.5826 -6.2803 42 1 5.3992 7.4264 -5.3326 43 1 4.1124 5.8144 -9.3045 44 1 3.0122 7.4578 -10.7699 45 1 1.8489 9.9229 -10.5287 46 1 4.4311 10.2442 -11.8165 47 1 2.5086 12.8539 -10.6701 48 1 2.6133 11.9397 -8.4183 49 1 4.3090 10.6163 -8.2138 50 1 5.4033 8.9783 -6.7378 51 1 4.5113 3.0284 0.9627 52 1 3.4182 3.4416 -0.4277 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10970304_4549632.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:36:22 Heat of formation + Delta-G solvation = -110.909853 kcal Electronic energy + Delta-G solvation = -36262.219086 eV Core-core repulsion = 31162.046294 eV Total energy + Delta-G solvation = -5100.172792 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 402.165 amu Computer time = 1.84 seconds Orbital eigenvalues (eV) -43.94877 -42.02904 -41.30362 -40.81893 -39.27036 -39.15624 -37.48629 -37.18093 -35.48962 -34.58234 -33.17204 -32.06014 -31.51213 -29.59744 -28.88390 -28.38866 -26.88492 -26.68268 -26.16393 -24.20415 -23.30043 -22.69454 -22.26205 -22.02200 -21.20840 -20.52327 -19.48023 -19.18277 -19.01849 -18.32884 -18.06041 -17.55977 -17.47399 -17.38576 -16.97568 -16.78303 -16.60085 -16.32101 -16.03106 -15.88188 -15.75271 -15.55350 -15.30841 -14.77097 -14.65349 -14.50549 -14.36676 -14.33691 -14.19979 -14.09297 -13.81394 -13.68837 -13.60926 -13.59231 -13.56392 -13.40168 -13.05860 -12.83224 -12.56965 -12.38934 -12.23221 -12.07551 -12.05455 -11.89317 -11.86507 -11.73049 -11.48204 -11.30082 -10.80851 -10.41199 -10.35154 -10.04491 -9.72792 -9.23399 -4.99772 -0.28023 0.27207 0.30653 0.95531 1.02393 1.33648 1.34045 1.62444 1.63706 1.92117 1.98178 2.03967 2.37097 2.65762 3.18565 3.24957 3.30279 3.56042 3.58306 3.63838 3.64833 3.71065 3.71891 3.80869 3.94929 3.97749 4.02410 4.08914 4.22741 4.25057 4.29287 4.30934 4.42470 4.44053 4.47175 4.50469 4.51411 4.57467 4.61545 4.65445 4.67835 4.73853 4.78686 4.87768 4.93592 4.96779 4.98316 5.09440 5.15526 5.25512 5.26593 5.30946 5.39605 5.50033 5.67471 5.69253 6.26588 6.28219 6.60733 6.79952 6.85757 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.363 6.363 3 C 0.470 3.530 4 O -0.538 6.538 5 C -0.103 4.103 6 H 0.157 0.843 7 C -0.131 4.131 8 C 0.125 3.875 9 H 0.129 0.871 10 N -0.701 5.701 11 C 0.606 3.394 12 O -0.539 6.539 13 C -0.097 4.097 14 C -0.093 4.093 15 C -0.095 4.095 16 C -0.186 4.186 17 C 0.009 3.991 18 C 0.135 3.865 19 O -0.327 6.327 20 C 0.125 3.875 21 C -0.163 4.163 22 C -0.061 4.061 23 C -0.161 4.161 24 C -0.072 4.072 25 O -0.558 6.558 26 Si 0.779 3.221 27 C -0.077 4.077 28 C -0.201 4.201 29 O -0.163 6.163 30 C -0.120 4.120 31 H 0.059 0.941 32 H 0.128 0.872 33 H 0.062 0.938 34 H 0.085 0.915 35 H 0.099 0.901 36 H 0.414 0.586 37 H 0.077 0.923 38 H 0.089 0.911 39 H 0.073 0.927 40 H 0.185 0.815 41 H 0.133 0.867 42 H 0.100 0.900 43 H 0.131 0.869 44 H 0.133 0.867 45 H 0.103 0.897 46 H 0.395 0.605 47 H -0.304 1.304 48 H -0.284 1.284 49 H 0.150 0.850 50 H 0.160 0.840 51 H 0.104 0.896 52 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.180 2.191 0.999 3.989 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.279 6.279 3 C 0.315 3.685 4 O -0.427 6.427 5 C -0.122 4.122 6 H 0.175 0.825 7 C -0.169 4.169 8 C 0.020 3.980 9 H 0.147 0.853 10 N -0.351 5.351 11 C 0.393 3.607 12 O -0.419 6.419 13 C -0.149 4.149 14 C -0.096 4.096 15 C -0.151 4.151 16 C -0.204 4.204 17 C -0.043 4.043 18 C 0.061 3.939 19 O -0.242 6.242 20 C 0.080 3.920 21 C -0.181 4.181 22 C -0.079 4.079 23 C -0.161 4.161 24 C -0.181 4.181 25 O -0.366 6.366 26 Si 0.686 3.314 27 C -0.095 4.095 28 C -0.219 4.219 29 O -0.060 6.060 30 C -0.158 4.158 31 H 0.078 0.922 32 H 0.147 0.853 33 H 0.081 0.919 34 H 0.103 0.897 35 H 0.117 0.883 36 H 0.250 0.750 37 H 0.096 0.904 38 H 0.108 0.892 39 H 0.092 0.908 40 H 0.202 0.798 41 H 0.151 0.849 42 H 0.118 0.882 43 H 0.149 0.851 44 H 0.151 0.849 45 H 0.120 0.880 46 H 0.245 0.755 47 H -0.232 1.232 48 H -0.211 1.211 49 H 0.167 0.833 50 H 0.178 0.822 51 H 0.122 0.878 52 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges 2.261 2.288 1.518 3.557 hybrid contribution -1.278 -0.254 -0.216 1.321 sum 0.983 2.034 1.302 2.607 Atomic orbital electron populations 1.23529 0.75049 1.05634 1.02422 1.86522 1.24756 1.33163 1.83456 1.24012 0.92565 0.81009 0.70944 1.90666 1.67918 1.37400 1.46753 1.22434 0.85900 1.01548 1.02335 0.82526 1.23429 0.97600 1.01365 0.94541 1.22594 0.98248 0.89423 0.87694 0.85334 1.45839 1.15345 1.36997 1.36936 1.16599 0.82630 0.81631 0.79808 1.90855 1.47375 1.38673 1.64994 1.21895 0.92182 0.96850 1.03959 1.20995 0.95961 0.97704 0.94958 1.20464 0.92959 0.98113 1.03586 1.21907 0.98257 0.97886 1.02396 1.22429 0.92815 0.97410 0.91624 1.21269 0.98368 0.89876 0.84367 1.86108 1.66846 1.35334 1.35889 1.19090 0.93503 0.88646 0.90784 1.20626 1.01673 1.01083 0.94752 1.20911 0.96691 0.92057 0.98282 1.20346 1.02622 0.95151 0.97999 1.25132 0.99048 1.07811 0.86145 1.86462 1.29641 1.94180 1.26323 0.93780 0.89550 0.72663 0.75433 1.21052 0.95142 1.00087 0.93198 1.21487 1.05830 0.91168 1.03449 1.83963 1.40992 1.37965 1.43058 1.23348 0.96436 0.94760 1.01290 0.92178 0.85346 0.91922 0.89687 0.88281 0.74990 0.90446 0.89215 0.90809 0.79800 0.84912 0.88150 0.85114 0.84904 0.87967 0.75488 1.23212 1.21092 0.83257 0.82204 0.87754 0.88806 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.56 113.37 1.20 1.17 16 2 O -0.36 -1.05 10.57 -51.41 -0.54 -1.60 16 3 C 0.47 1.69 7.48 71.24 0.53 2.22 16 4 O -0.54 -5.18 15.65 22.00 0.34 -4.84 16 5 C -0.10 0.31 4.26 -11.02 -0.05 0.26 16 6 H 0.16 -1.21 8.14 -2.39 -0.02 -1.23 16 7 C -0.13 0.33 7.43 31.12 0.23 0.56 16 8 C 0.12 -0.25 4.24 45.53 0.19 -0.06 16 9 H 0.13 -0.20 7.46 -2.39 -0.02 -0.22 16 10 N -0.70 -0.43 5.35 -443.97 -2.38 -2.80 16 11 C 0.61 3.57 7.79 86.44 0.67 4.24 16 12 O -0.54 -5.66 14.34 -4.35 -0.06 -5.73 16 13 C -0.10 -0.53 7.13 24.07 0.17 -0.36 16 14 C -0.09 -0.38 6.20 -19.74 -0.12 -0.50 16 15 C -0.09 -0.21 9.82 71.24 0.70 0.49 16 16 C -0.19 -0.03 10.73 22.07 0.24 0.20 16 17 C 0.01 0.00 6.94 24.97 0.17 0.18 16 18 C 0.14 -0.63 5.27 71.24 0.38 -0.26 16 19 O -0.33 -0.44 10.12 -92.36 -0.93 -1.37 16 20 C 0.12 0.07 6.69 22.51 0.15 0.22 16 21 C -0.16 -0.32 9.99 22.37 0.22 -0.10 16 22 C -0.06 -0.07 9.60 22.25 0.21 0.14 16 23 C -0.16 0.13 5.39 -19.85 -0.11 0.02 16 24 C -0.07 0.08 2.82 71.24 0.20 0.28 16 25 O -0.56 0.10 12.76 -148.98 -1.90 -1.80 16 26 Si 0.78 -2.57 29.78 68.60 2.04 -0.52 16 27 C -0.08 0.27 8.66 22.26 0.19 0.47 16 28 C -0.20 0.74 9.04 22.37 0.20 0.94 16 29 O -0.16 -0.61 10.40 -4.96 -0.05 -0.66 16 30 C -0.12 0.40 7.16 31.13 0.22 0.62 16 31 H 0.06 0.00 8.13 -2.39 -0.02 -0.02 16 32 H 0.13 -0.81 8.14 -2.39 -0.02 -0.83 16 33 H 0.06 -0.03 8.13 -2.39 -0.02 -0.05 16 34 H 0.08 -0.07 8.09 -2.38 -0.02 -0.09 16 35 H 0.10 -0.36 8.14 -2.39 -0.02 -0.37 16 36 H 0.41 -0.73 8.48 -92.71 -0.79 -1.51 16 37 H 0.08 0.15 8.14 -2.39 -0.02 0.13 16 38 H 0.09 -0.18 8.14 -2.39 -0.02 -0.20 16 39 H 0.07 0.40 6.44 -2.39 -0.02 0.39 16 40 H 0.18 -0.97 8.06 -2.91 -0.02 -0.99 16 41 H 0.13 -1.45 7.66 -2.39 -0.02 -1.47 16 42 H 0.10 -0.76 7.66 -2.39 -0.02 -0.78 16 43 H 0.13 0.20 8.06 -2.91 -0.02 0.18 16 44 H 0.13 0.06 8.06 -2.91 -0.02 0.04 16 45 H 0.10 0.06 7.96 -2.39 -0.02 0.04 16 46 H 0.40 -3.31 8.70 -74.06 -0.64 -3.96 16 47 H -0.30 -1.49 7.11 99.48 0.71 -0.78 16 48 H -0.28 -0.26 7.11 99.48 0.71 0.44 16 49 H 0.15 -1.20 4.87 -2.91 -0.01 -1.22 16 50 H 0.16 -1.56 6.30 -2.91 -0.02 -1.58 16 51 H 0.10 -0.60 8.14 -2.39 -0.02 -0.62 16 52 H 0.09 -0.08 7.42 -2.39 -0.02 -0.10 16 Total: 0.00 -25.09 440.71 1.73 -23.36 By element: Atomic # 1 Polarization: -14.40 SS G_CDS: -0.40 Total: -14.80 kcal Atomic # 6 Polarization: 5.14 SS G_CDS: 5.61 Total: 10.76 kcal Atomic # 7 Polarization: -0.43 SS G_CDS: -2.38 Total: -2.80 kcal Atomic # 8 Polarization: -12.85 SS G_CDS: -3.15 Total: -16.00 kcal Atomic # 14 Polarization: -2.57 SS G_CDS: 2.04 Total: -0.52 kcal Total: -25.09 1.73 -23.36 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10970304_4549632.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -87.546 kcal (2) G-P(sol) polarization free energy of solvation -25.095 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -112.640 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.730 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.364 kcal (6) G-S(sol) free energy of system = (1) + (5) -110.910 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.84 seconds